SIMILAR PATTERNS OF AMINO ACIDS FOR 2ECP_B_ACRB992_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1e4o MALTODEXTRIN
PHOSPHORYLASE

(Escherichia
coli) 		PF00343
(Phosphorylase) 		8 ASN A 112
LEU A 115
TYR A 256
ASP A 259
ARG A 268
ARG A 534
HIS A 536
ALA A 575
 GLC  A 996 (-3.5A)
GLC  A 997 (-3.8A)
GLC  A 996 (-3.8A)
GLC  A 995 ( 4.4A)
GLC  A 995 (-3.3A)
GLC  A 996 (-4.1A)
GLC  A 995 (-4.4A)
GLC  A 995 (-3.5A)
 0.90A 2ecpB-1e4oA:
60.2		 2ecpB-1e4oA:
98.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1e4o MALTODEXTRIN
PHOSPHORYLASE

(Escherichia
coli) 		PF00343
(Phosphorylase) 		9 ASN A 112
LEU A 115
TYR A 256
ASP A 259
ARG A 268
ASP A 307
HIS A 309
ARG A 534
ALA A 575
 GLC  A 996 (-3.5A)
GLC  A 997 (-3.8A)
GLC  A 996 (-3.8A)
GLC  A 995 ( 4.4A)
GLC  A 995 (-3.3A)
GLC  A 997 (-3.6A)
GLC  A 996 (-4.0A)
GLC  A 996 (-4.1A)
GLC  A 995 (-3.5A)
 0.87A 2ecpB-1e4oA:
60.2		 2ecpB-1e4oA:
98.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1ygp YEAST GLYCOGEN
PHOSPHORYLASE

(Saccharomyces
cerevisiae) 		PF00343
(Phosphorylase) 		10 ASN A 133
LEU A 136
TYR A 280
ASP A 283
ARG A 292
ASP A 339
HIS A 341
ARG A 569
HIS A 571
ALA A 610
 None
None
None
None
None
None
None
PO4  A1900 (-3.7A)
None
None
 0.61A 2ecpB-1ygpA:
45.3		 2ecpB-1ygpA:
42.41
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2c4m GLYCOGEN
PHOSPHORYLASE

(Corynebacterium
callunae) 		PF00343
(Phosphorylase) 		9 ASN A 112
LEU A 115
TYR A 245
ASP A 248
ARG A 257
ASP A 296
HIS A 298
HIS A 525
ALA A 564
 None
 0.68A 2ecpB-2c4mA:
49.1		 2ecpB-2c4mA:
45.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2cun PHOSPHOGLYCERATE
KINASE

(Pyrococcus
horikoshii) 		PF00162
(PGK) 		5 ASN A 146
LEU A  16
ARG A  17
HIS A  57
ALA A 152
 None
None
None
GOL  A 501 (-4.2A)
None
 1.38A 2ecpB-2cunA:
undetectable		 2ecpB-2cunA:
19.31
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2gj4 GLYCOGEN
PHOSPHORYLASE,
MUSCLE FORM

(Oryctolagus
cuniculus) 		PF00343
(Phosphorylase) 		5 ASN A 133
LEU A 136
ASP A 339
HIS A 341
ALA A 610
 None
 0.98A 2ecpB-2gj4A:
45.9		 2ecpB-2gj4A:
43.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2z4g HISTIDINOL
PHOSPHATASE

(Thermus
thermophilus) 		PF02811
(PHP)
PF13263
(PHP_C) 		5 ASN A 191
LEU A 157
ASP A  37
HIS A 108
ALA A 225
 None
None
None
FE  A 502 (-3.5A)
None
 1.33A 2ecpB-2z4gA:
undetectable		 2ecpB-2z4gA:
16.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a5v ALPHA-GALACTOSIDASE

(Umbelopsis
vinacea) 		PF16499
(Melibiase_2) 		5 ASN A 130
ASP A 240
ARG A 185
ASP A  52
ALA A 211
 None
None
None
TRS  A 841 (-3.6A)
None
 1.40A 2ecpB-3a5vA:
2.1		 2ecpB-3a5vA:
18.08
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3cem GLYCOGEN
PHOSPHORYLASE, LIVER
FORM

(Homo sapiens) 		PF00343
(Phosphorylase) 		6 ASN A 133
LEU A 136
ASP A 339
HIS A 341
HIS A 571
ALA A 610
 None
NBG  A   1 (-4.1A)
None
None
None
None
 0.96A 2ecpB-3cemA:
53.4		 2ecpB-3cemA:
44.18
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k1u BETA-XYLOSIDASE,
FAMILY 43 GLYCOSYL
HYDROLASE

(Clostridium
acetobutylicum) 		PF04616
(Glyco_hydro_43) 		5 TYR A 220
ASP A 217
ASP A  16
HIS A 277
HIS A 159
 TRS  A 801 (-4.6A)
None
TRS  A 801 (-3.0A)
TRS  A 801 (-4.5A)
None
 1.37A 2ecpB-3k1uA:
undetectable		 2ecpB-3k1uA:
16.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lrk ALPHA-GALACTOSIDASE
1

(Saccharomyces
cerevisiae) 		PF16499
(Melibiase_2) 		5 ASN A 150
ASP A 262
ARG A 205
ASP A  73
ALA A 233
 None
GOL  A7002 (-2.9A)
GOL  A7002 (-3.9A)
GOL  A7001 (-3.4A)
None
 1.32A 2ecpB-3lrkA:
undetectable		 2ecpB-3lrkA:
19.51
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4bqi ALPHA-GLUCAN
PHOSPHORYLASE 2,
CYTOSOLIC

(Arabidopsis
thaliana) 		PF00343
(Phosphorylase) 		9 ASN A 136
LEU A 139
TYR A 285
ASP A 288
ARG A 297
ASP A 341
HIS A 343
ARG A 573
HIS A 575
 None
 0.55A 2ecpB-4bqiA:
49.3		 2ecpB-4bqiA:
42.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4l22 PHOSPHORYLASE

(Streptococcus
mutans) 		PF00343
(Phosphorylase) 		9 ASN A 103
LEU A 106
TYR A 228
ARG A 240
ASP A 279
HIS A 281
ARG A 498
HIS A 500
ALA A 538
 None
 0.72A 2ecpB-4l22A:
48.5		 2ecpB-4l22A:
39.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4l22 PHOSPHORYLASE

(Streptococcus
mutans) 		PF00343
(Phosphorylase) 		8 ASN A 103
LEU A 106
TYR A 228
ASP A 231
ARG A 240
ASP A 279
HIS A 281
ALA A 538
 None
 0.79A 2ecpB-4l22A:
48.5		 2ecpB-4l22A:
39.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ikp GLYCOGEN
PHOSPHORYLASE, BRAIN
FORM

(Homo sapiens) 		PF00343
(Phosphorylase) 		5 ASN A 133
LEU A 136
ASP A 339
HIS A 341
ARG A 569
 None
None
None
None
PLP  A 901 (-4.1A)
 1.18A 2ecpB-5ikpA:
47.1		 2ecpB-5ikpA:
43.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ikp GLYCOGEN
PHOSPHORYLASE, BRAIN
FORM

(Homo sapiens) 		PF00343
(Phosphorylase) 		8 ASN A 133
LEU A 136
TYR A 280
ARG A 292
ASP A 339
HIS A 341
HIS A 571
ALA A 610
 None
 0.70A 2ecpB-5ikpA:
47.1		 2ecpB-5ikpA:
43.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5lrb ALPHA-1,4 GLUCAN
PHOSPHORYLASE

(Hordeum vulgare) 		PF00343
(Phosphorylase) 		9 ASN A 180
LEU A 183
TYR A 329
ASP A 332
ARG A 341
ASP A 383
HIS A 385
ARG A 699
HIS A 701
 None
GLC  A1001 (-4.3A)
None
None
None
None
None
GLC  A1001 ( 4.9A)
None
 0.73A 2ecpB-5lrbA:
52.0		 2ecpB-5lrbA:
39.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nuv AUTOPHAGY-RELATED
PROTEIN 16-1

(Homo sapiens) 		PF00400
(WD40) 		5 ASN A 386
ASP A 454
ARG A 539
HIS A 407
ALA A 384
 None
 1.45A 2ecpB-5nuvA:
undetectable		 2ecpB-5nuvA:
18.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6gnf -

(-) 		no annotation 6 LEU A  20
TYR A 101
ASP A 108
ASP A 151
HIS A 153
ARG A 338
 QPS  A 602 (-4.3A)
QPS  A 602 (-3.9A)
QPS  A 602 ( 2.5A)
QPS  A 602 (-3.3A)
QPS  A 602 (-3.9A)
ADP  A 601 ( 4.1A)
 0.91A 2ecpB-6gnfA:
23.3		 2ecpB-6gnfA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6gng -

(-) 		no annotation 5 LEU A  38
TYR A 120
ASP A 127
ASP A 169
ARG A 356
 QPS  A 601 (-4.1A)
QPS  A 601 (-4.4A)
QPS  A 601 (-2.9A)
QPS  A 601 (-3.3A)
ADP  A 602 ( 3.6A)
 0.94A 2ecpB-6gngA:
22.5		 2ecpB-6gngA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6gng -

(-) 		no annotation 5 LEU A  38
TYR A 120
ASP A 169
HIS A 171
ARG A 356
 QPS  A 601 (-4.1A)
QPS  A 601 (-4.4A)
QPS  A 601 (-3.3A)
QPS  A 601 (-4.2A)
ADP  A 602 ( 3.6A)
 0.87A 2ecpB-6gngA:
22.5		 2ecpB-6gngA:
undetectable