SIMILAR PATTERNS OF AMINO ACIDS FOR 2BXG_B_IBPB2001

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1tf0 SERUM ALBUMIN

(Homo sapiens) 		PF00273
(Serum_albumin) 		5 ASN A 391
GLY A 431
LEU A 453
ARG A 485
SER A 489
 None
 1.37A 2bxgB-1tf0A:
47.3		 2bxgB-1tf0A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1tf0 SERUM ALBUMIN

(Homo sapiens) 		PF00273
(Serum_albumin) 		7 ILE A 388
ASN A 391
ARG A 410
LYS A 414
GLY A 434
LEU A 453
SER A 489
 None
 0.75A 2bxgB-1tf0A:
47.3		 2bxgB-1tf0A:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1tf0 SERUM ALBUMIN

(Homo sapiens) 		PF00273
(Serum_albumin) 		8 ILE A 388
ASN A 391
TYR A 411
LYS A 414
GLY A 434
LEU A 453
ARG A 485
SER A 489
 None
 0.61A 2bxgB-1tf0A:
47.3		 2bxgB-1tf0A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2p5t PEZT
PUTATIVE
TRANSCRIPTIONAL
REGULATOR PEZA

(Streptococcus
pneumoniae) 		PF06414
(Zeta_toxin)
no annotation 		5 ILE B  62
TYR A  94
GLY B  65
LEU B  22
SER A 119
 None
 1.35A 2bxgB-2p5tB:
0.0		 2bxgB-2p5tB:
16.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2xt0 HALOALKANE
DEHALOGENASE

(Plesiocystis
pacifica) 		PF00561
(Abhydrolase_1) 		5 ILE A 213
ARG A 103
GLY A 222
LEU A 128
SER A 104
 None
None
SO4  A1298 (-3.0A)
None
None
 1.43A 2bxgB-2xt0A:
0.1		 2bxgB-2xt0A:
19.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k7d GLUTAMATE-AMMONIA-LI
GASE
ADENYLYLTRANSFERASE

(Escherichia
coli) 		PF03710
(GlnE)
PF08335
(GlnD_UR_UTase) 		5 ILE A 852
TYR A 698
GLY A 921
ARG A 908
SER A 643
 None
 1.28A 2bxgB-3k7dA:
1.0		 2bxgB-3k7dA:
22.79
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4po0 SERUM ALBUMIN

(Oryctolagus
cuniculus) 		PF00273
(Serum_albumin) 		8 ASN A 391
ARG A 410
TYR A 411
LYS A 414
GLY A 434
LEU A 453
ARG A 485
SER A 489
 NPS  A 601 (-4.3A)
NPS  A 601 (-4.5A)
NPS  A 601 (-4.3A)
NPS  A 601 (-2.7A)
None
NPS  A 601 (-4.7A)
None
NPS  A 601 (-3.1A)
 0.54A 2bxgB-4po0A:
48.9		 2bxgB-4po0A:
74.32
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4po0 SERUM ALBUMIN

(Oryctolagus
cuniculus) 		PF00273
(Serum_albumin) 		5 ASN A 391
GLY A 431
LEU A 453
ARG A 485
SER A 489
 NPS  A 601 (-4.3A)
None
NPS  A 601 (-4.7A)
None
NPS  A 601 (-3.1A)
 1.49A 2bxgB-4po0A:
48.9		 2bxgB-4po0A:
74.32
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dqf SERUM ALBUMIN

(Equus caballus) 		PF00273
(Serum_albumin) 		6 ASN A 390
ARG A 409
TYR A 410
LYS A 413
GLY A 433
SER A 488
 None
 0.61A 2bxgB-5dqfA:
49.6		 2bxgB-5dqfA:
76.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dqf SERUM ALBUMIN

(Equus caballus) 		PF00273
(Serum_albumin) 		5 ASN A 390
GLY A 430
LEU A 452
ARG A 484
SER A 488
 None
 1.24A 2bxgB-5dqfA:
49.6		 2bxgB-5dqfA:
76.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dqf SERUM ALBUMIN

(Equus caballus) 		PF00273
(Serum_albumin) 		6 ASN A 390
LYS A 413
GLY A 433
LEU A 452
ARG A 484
SER A 488
 None
 0.66A 2bxgB-5dqfA:
49.6		 2bxgB-5dqfA:
76.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dqf SERUM ALBUMIN

(Equus caballus) 		PF00273
(Serum_albumin) 		6 ASN A 390
TYR A 410
LYS A 413
GLY A 433
ARG A 484
SER A 488
 None
 0.42A 2bxgB-5dqfA:
49.6		 2bxgB-5dqfA:
76.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ghk SERUM ALBUMIN

(Canis lupus) 		PF00273
(Serum_albumin) 		8 ASN A 391
ARG A 410
TYR A 411
LYS A 414
GLY A 434
LEU A 453
ARG A 485
SER A 489
 None
 0.66A 2bxgB-5ghkA:
46.4		 2bxgB-5ghkA:
79.97
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ghk SERUM ALBUMIN

(Canis lupus) 		PF00273
(Serum_albumin) 		5 ASN A 391
GLY A 431
LEU A 453
ARG A 485
SER A 489
 None
 1.49A 2bxgB-5ghkA:
46.4		 2bxgB-5ghkA:
79.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nmi CYTOCHROME B-C1
COMPLEX SUBUNIT 1,
MITOCHONDRIAL

(Bos taurus) 		PF00675
(Peptidase_M16)
PF05193
(Peptidase_M16_C) 		5 ILE A 312
GLY A 261
LEU A 163
ARG A  92
SER A  45
 None
 1.31A 2bxgB-5nmiA:
0.0		 2bxgB-5nmiA:
21.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ori ALBUMIN

(Capra hircus) 		no annotation 5 ASN A 390
GLY A 430
LEU A 452
ARG A 484
SER A 488
 None
 1.31A 2bxgB-5oriA:
49.1		 2bxgB-5oriA:
74.66
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5ori ALBUMIN

(Capra hircus) 		no annotation 9 ILE A 387
ASN A 390
ARG A 409
TYR A 410
LYS A 413
GLY A 433
LEU A 452
ARG A 484
SER A 488
 None
 0.66A 2bxgB-5oriA:
49.1		 2bxgB-5oriA:
74.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5yxe SERUM ALBUMIN

(Felis catus) 		no annotation 8 ASN A 391
ARG A 410
TYR A 411
LYS A 414
GLY A 434
LEU A 453
ARG A 485
SER A 489
 None
 0.73A 2bxgB-5yxeA:
46.8		 2bxgB-5yxeA:
11.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5yxe SERUM ALBUMIN

(Felis catus) 		no annotation 5 ASN A 391
GLY A 431
LEU A 453
ARG A 485
SER A 489
 None
 1.45A 2bxgB-5yxeA:
46.8		 2bxgB-5yxeA:
11.11