SIMILAR PATTERNS OF AMINO ACIDS FOR 2AVD_B_SAMB601
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
![]() | 1g6o | CAG-ALPHA (Helicobacterpylori) |
PF00437(T2SSE) | 5 | GLY A 167PHE A 194VAL A 174ASP A 166ALA A 163 | None | 1.38A | 2avdB-1g6oA:3.8 | 2avdB-1g6oA:20.06 | ||
![]() | 1gv0 | MALATE DEHYDROGENASE (Chlorobaculumtepidum) |
PF00056(Ldh_1_N)PF02866(Ldh_1_C) | 5 | GLY A 144ALA A 250ASP A 147ALA A 143ARG A 150 | NoneNoneNoneNAD A1306 ( 4.7A)None | 1.31A | 2avdB-1gv0A:4.7 | 2avdB-1gv0A:21.97 | ||
![]() | 1hjo | PROTEIN (HEAT-SHOCK70KD PROTEIN) (Homo sapiens) |
PF00012(HSP70) | 5 | GLY A 372ALA A 368ALA A 182TYR A 183ARG A 187 | None | 1.29A | 2avdB-1hjoA:0.1 | 2avdB-1hjoA:19.36 | ||
![]() | 1lqa | TAS PROTEIN (Escherichiacoli) |
PF00248(Aldo_ket_red) | 5 | VAL A 340ASP A 279ALA A 276TYR A 277ARG A 283 | None | 1.42A | 2avdB-1lqaA:0.0 | 2avdB-1lqaA:22.65 | ||
![]() | 1mhs | PLASMA MEMBRANEATPASE (Neurosporacrassa) |
PF00122(E1-E2_ATPase)PF00690(Cation_ATPase_N)PF00702(Hydrolase) | 5 | SER A 368GLY A 648VAL A 665ALA A 658ALA A 662 | None | 1.26A | 2avdB-1mhsA:0.6 | 2avdB-1mhsA:14.30 | ||
![]() | 1n31 | L-CYSTEINE/CYSTINELYASE C-DES (Synechocystissp. PCC 6714) |
PF00266(Aminotran_5) | 5 | GLY A 26PHE A 25TYR A 358ALA A 199ALA A 223 | CYS A2002 (-4.8A)NoneNonePLP A2001 (-3.4A)None | 1.06A | 2avdB-1n31A:3.8 | 2avdB-1n31A:22.31 | ||
![]() | 1n31 | L-CYSTEINE/CYSTINELYASE C-DES (Synechocystissp. PCC 6714) |
PF00266(Aminotran_5) | 5 | GLY A 27PHE A 25TYR A 358ALA A 199ALA A 223 | CYS A2002 (-3.3A)NoneNonePLP A2001 (-3.4A)None | 1.40A | 2avdB-1n31A:3.8 | 2avdB-1n31A:22.31 | ||
![]() | 1o5w | AMINE OXIDASE[FLAVIN-CONTAINING]A (Rattusnorvegicus) |
PF01593(Amino_oxidase) | 5 | SER A 403GLY A 22TYR A 53ALA A 27ARG A 51 | FAD A 652 ( 4.1A)FAD A 652 (-3.4A)NoneNoneFAD A 652 (-3.7A) | 1.38A | 2avdB-1o5wA:2.3 | 2avdB-1o5wA:18.27 | ||
![]() | 1pie | GALACTOKINASE (Lactococcuslactis) |
PF00288(GHMP_kinases_N)PF08544(GHMP_kinases_C)PF10509(GalKase_gal_bdg) | 5 | GLY A 342PHE A 305VAL A 358ALA A 334ALA A 343 | None | 1.32A | 2avdB-1pieA:0.0 | 2avdB-1pieA:18.18 | ||
![]() | 1qgc | PROTEIN (GH-LOOPFROM VIRUS CAPSIDPROTEIN VP1)PROTEIN(IMMUNOGLOBULINHEAVY CHAIN) (Foot-and-mouthdisease virus;Mus musculus) |
no annotationPF07654(C1-set)PF07686(V-set) | 5 | GLY 5 142TYR A 60ALA 5 140ASP 5 143ARG A 99 | None | 1.39A | 2avdB-1qgc5:undetectable | 2avdB-1qgc5:9.09 | ||
![]() | 1sus | CAFFEOYL-COAO-METHYLTRANSFERASE (Medicago sativa) |
PF01596(Methyltransf_3) | 6 | GLY A 87TYR A 92ALA A 140ASP A 163ALA A 164TYR A 172 | SAH A 301 (-3.4A)NoneSAH A 301 (-3.9A) CA A 305 (-2.5A)SAH A 301 ( 3.7A)None | 0.61A | 2avdB-1susA:29.9 | 2avdB-1susA:34.96 | ||
![]() | 1u60 | PROBABLE GLUTAMINASEYBAS (Escherichiacoli) |
PF04960(Glutaminase) | 5 | GLY A 56VAL A 11ALA A 44ASP A 57ALA A 42 | NoneNoneNoneEDO A1219 ( 4.8A)None | 1.40A | 2avdB-1u60A:undetectable | 2avdB-1u60A:20.13 | ||
![]() | 1vkd | CONSERVEDHYPOTHETICAL PROTEINTM1225 (Thermotogamaritima) |
PF04041(Glyco_hydro_130) | 5 | GLY A 301TYR A 105ALA A 308ALA A 302TYR A 272 | None | 1.32A | 2avdB-1vkdA:undetectable | 2avdB-1vkdA:19.42 | ||
![]() | 1vra | ARGININEBIOSYNTHESISBIFUNCTIONAL PROTEINARGJ (Bacillushalodurans) |
PF01960(ArgJ) | 5 | GLY B 391VAL B 382ALA B 306ASP B 299ALA B 302 | None | 1.26A | 2avdB-1vraB:undetectable | 2avdB-1vraB:21.95 | ||
![]() | 1whs | SERINECARBOXYPEPTIDASE II (Triticumaestivum) |
PF00450(Peptidase_S10) | 5 | SER A 156GLY A 144PHE A 172TYR A 141ALA A 148 | None | 1.34A | 2avdB-1whsA:undetectable | 2avdB-1whsA:21.13 | ||
![]() | 1woy | METHIONYL-TRNASYNTHETASE (Thermusthermophilus) |
PF00133(tRNA-synt_1)PF09334(tRNA-synt_1g) | 5 | GLY A 354VAL A 495ASP A 351ALA A 350TYR A 345 | None | 1.16A | 2avdB-1woyA:undetectable | 2avdB-1woyA:20.36 | ||
![]() | 2avd | CATECHOL-O-METHYLTRANSFERASE (Homo sapiens) |
PF01596(Methyltransf_3) | 6 | GLY A 110PHE A 112ALA A 163ALA A 186TYR A 194ARG A 212 | SAM A 501 (-3.4A)SAM A 501 (-4.7A)SAM A 501 (-3.5A)SAM A 501 (-3.7A)NoneSAM A 501 (-4.0A) | 1.27A | 2avdB-2avdA:39.2 | 2avdB-2avdA:100.00 | ||
![]() | 2avd | CATECHOL-O-METHYLTRANSFERASE (Homo sapiens) |
PF01596(Methyltransf_3) | 11 | SER A 84MET A 85MET A 86GLY A 110PHE A 112TYR A 115VAL A 135ALA A 163ASP A 185ALA A 186TYR A 194 | NoneSAM A 501 (-4.6A)SAM A 501 (-4.2A)SAM A 501 (-3.4A)SAM A 501 (-4.7A)NoneSAM A 501 (-4.3A)SAM A 501 (-3.5A)SAM A 501 (-3.4A)SAM A 501 (-3.7A)None | 0.66A | 2avdB-2avdA:39.2 | 2avdB-2avdA:100.00 | ||
![]() | 2b24 | NAPHTHALENEDIOXYGENASE LARGESUBUNIT (Rhodococcus sp.NCIMB 12038) |
PF00355(Rieske)PF00848(Ring_hydroxyl_A) | 5 | PHE A 210ALA A 237ASP A 213ALA A 214TYR A 419 | IND A 503 ( 4.4A)NoneNoneIND A 503 ( 3.9A)None | 1.41A | 2avdB-2b24A:undetectable | 2avdB-2b24A:20.09 | ||
![]() | 2d4e | 5-CARBOXYMETHYL-2-HYDROXYMUCONATESEMIALDEHYDEDEHYDROGENASE (Thermusthermophilus) |
PF00171(Aldedh) | 5 | MET A 143PHE A 189VAL A 166ALA A 163ARG A 160 | None | 1.32A | 2avdB-2d4eA:3.6 | 2avdB-2d4eA:19.38 | ||
![]() | 2few | PTS SYSTEMMANNITOL-SPECIFICEIICBA COMPONENT (Escherichiacoli) |
PF00359(PTS_EIIA_2) | 5 | GLY A 78PHE A 5VAL A 80ALA A 105TYR A 42 | None | 1.30A | 2avdB-2fewA:undetectable | 2avdB-2fewA:20.87 | ||
![]() | 2hnk | SAM-DEPENDENTO-METHYLTRANSFERASE (Leptospirainterrogans) |
PF01596(Methyltransf_3) | 8 | GLY A 68PHE A 70TYR A 73VAL A 93ALA A 121ASP A 154ALA A 155TYR A 163 | SAH A2001 (-3.3A)SAH A2001 (-4.4A)NoneSAH A2001 (-4.1A)SAH A2001 (-3.3A)SAH A2001 (-3.3A)SAH A2001 ( 3.8A)None | 0.57A | 2avdB-2hnkA:29.9 | 2avdB-2hnkA:35.42 | ||
![]() | 2iou | MAJOR TROPISMDETERMINANT P1 (Bordetellavirus BPP1) |
no annotation | 5 | SER A 288GLY A 155PHE A 293ALA A 152ALA A 154 | None | 1.09A | 2avdB-2iouA:undetectable | 2avdB-2iouA:19.28 | ||
![]() | 2og9 | MANDELATERACEMASE/MUCONATELACTONIZING ENZYME (Polaromonas sp.JS666) |
PF02746(MR_MLE_N)PF13378(MR_MLE_C) | 5 | GLY A 62VAL A 18ALA A 52ASP A 128ALA A 125 | None | 1.41A | 2avdB-2og9A:undetectable | 2avdB-2og9A:22.42 | ||
![]() | 2vz9 | FATTY ACID SYNTHASE (Sus scrofa) |
PF00107(ADH_zinc_N)PF00109(ketoacyl-synt)PF00698(Acyl_transf_1)PF02801(Ketoacyl-synt_C)PF08242(Methyltransf_12)PF08659(KR)PF14765(PS-DH)PF16197(KAsynt_C_assoc) | 5 | GLY A 8VAL A 184ALA A 230ASP A 92ALA A 89 | None | 1.37A | 2avdB-2vz9A:undetectable | 2avdB-2vz9A:7.03 | ||
![]() | 2w5s | PROCESSED GLYCEROLPHOSPHATELIPOTEICHOIC ACIDSYNTHASE (Staphylococcusaureus) |
PF00884(Sulfatase) | 5 | SER A 395GLY A 348VAL A 381ALA A 371TYR A 350 | None | 1.19A | 2avdB-2w5sA:undetectable | 2avdB-2w5sA:17.99 | ||
![]() | 2weu | TRYPTOPHAN5-HALOGENASE (Streptomycesrugosporus) |
PF04820(Trp_halogenase) | 5 | GLY A 344VAL A 341ALA A 364ALA A 347ARG A 328 | None | 1.41A | 2avdB-2weuA:undetectable | 2avdB-2weuA:18.62 | ||
![]() | 2zds | PUTATIVE DNA-BINDINGPROTEIN (Streptomycescoelicolor) |
PF01261(AP_endonuc_2)PF07582(AP_endonuc_2_N) | 5 | SER A 182GLY A 75PHE A 130ALA A 108ALA A 77 | None | 1.36A | 2avdB-2zdsA:undetectable | 2avdB-2zdsA:20.94 | ||
![]() | 3bxz | PREPROTEINTRANSLOCASE SUBUNITSECA (Escherichiacoli) |
PF07517(SecA_DEAD) | 5 | GLY A 177VAL A 128ALA A 140ASP A 133ALA A 136 | None | 1.37A | 2avdB-3bxzA:2.2 | 2avdB-3bxzA:21.19 | ||
![]() | 3c3y | O-METHYLTRANSFERASE (Mesembryanthemumcrystallinum) |
PF01596(Methyltransf_3) | 7 | GLY A 78PHE A 80TYR A 83ALA A 131ASP A 154ALA A 155TYR A 163 | SAH A 464 (-3.7A)SAH A 464 (-4.9A)NoneSAH A 464 (-3.5A) CA A 238 ( 2.2A)SAH A 464 (-3.7A)None | 0.57A | 2avdB-3c3yA:32.2 | 2avdB-3c3yA:37.50 | ||
![]() | 3cbg | O-METHYLTRANSFERASE (Synechocystissp. PCC 6803) |
PF01596(Methyltransf_3) | 7 | GLY A 68PHE A 70TYR A 73ALA A 121ASP A 143ALA A 144TYR A 152 | SAH A 301 (-3.7A)SAH A 301 (-4.8A)NoneSAH A 301 (-3.4A) MG A 401 ( 2.7A)SAH A 301 (-3.4A)None | 0.66A | 2avdB-3cbgA:31.1 | 2avdB-3cbgA:39.32 | ||
![]() | 3clq | UNCHARACTERIZEDPROTEIN (Enterococcusfaecalis) |
PF06545(DUF1116) | 5 | SER A 163GLY A 121PHE A 125VAL A 201ALA A 118 | None | 1.21A | 2avdB-3clqA:undetectable | 2avdB-3clqA:20.14 | ||
![]() | 3dul | O-METHYLTRANSFERASE,PUTATIVE (Bacillus cereus) |
PF01596(Methyltransf_3) | 5 | GLY A 66TYR A 71ALA A 119ASP A 140TYR A 149 | None | 0.90A | 2avdB-3dulA:23.6 | 2avdB-3dulA:28.69 | ||
![]() | 3dul | O-METHYLTRANSFERASE,PUTATIVE (Bacillus cereus) |
PF01596(Methyltransf_3) | 5 | GLY A 66TYR A 71ASP A 140ALA A 141TYR A 149 | None | 1.03A | 2avdB-3dulA:23.6 | 2avdB-3dulA:28.69 | ||
![]() | 3e1h | PUTATIVEUNCHARACTERIZEDPROTEIN (Neurosporacrassa) |
PF00195(Chal_sti_synt_N)PF02797(Chal_sti_synt_C) | 5 | MET A 382GLY A 155ALA A 182ALA A 158ARG A 160 | None | 1.39A | 2avdB-3e1hA:undetectable | 2avdB-3e1hA:20.39 | ||
![]() | 3e4d | ESTERASE D (Agrobacteriumfabrum) |
PF00756(Esterase) | 5 | GLY A 229PHE A 225ALA A 175ASP A 180ALA A 179 | None | 1.19A | 2avdB-3e4dA:undetectable | 2avdB-3e4dA:20.83 | ||
![]() | 3fjo | NADPH-CYTOCHROMEP450 REDUCTASE (Saccharomycescerevisiae;Homo sapiens) |
PF00175(NAD_binding_1)PF00258(Flavodoxin_1)PF00667(FAD_binding_1) | 5 | GLY A 610TYR A 436VAL A 511ALA A 616ASP A 611 | NoneFAD A 750 (-4.3A)NoneNoneNone | 1.15A | 2avdB-3fjoA:3.1 | 2avdB-3fjoA:16.35 | ||
![]() | 3foa | TAIL SHEATH PROTEINGP18 (Escherichiavirus T4) |
PF04984(Phage_sheath_1)PF17481(Phage_sheath_1N) | 5 | SER A 67MET A 66GLY A 31ALA A 358ALA A 30 | None | 0.97A | 2avdB-3foaA:undetectable | 2avdB-3foaA:17.16 | ||
![]() | 3j1c | CHAPERONIN ALPHASUBUNIT (Acidianustengchongensis) |
PF00118(Cpn60_TCP1) | 5 | SER A 522MET A 524VAL A 99ALA A 34ALA A 30 | None | 1.32A | 2avdB-3j1cA:undetectable | 2avdB-3j1cA:20.35 | ||
![]() | 3j2n | TAIL SHEATH PROTEINGP18 (Escherichiavirus T4) |
PF04984(Phage_sheath_1)PF17481(Phage_sheath_1N)PF17482(Phage_sheath_1C) | 5 | SER U 67MET U 66GLY U 31ALA U 358ALA U 30 | None | 0.97A | 2avdB-3j2nU:undetectable | 2avdB-3j2nU:15.54 | ||
![]() | 3j4j | TRANSLATIONINITIATION FACTORIF-2 (Thermusthermophilus) |
PF00009(GTP_EFTU)PF04760(IF2_N)PF11987(IF-2) | 5 | GLY A 111VAL A 250ALA A 307ASP A 126ALA A 112 | None | 1.35A | 2avdB-3j4jA:undetectable | 2avdB-3j4jA:18.55 | ||
![]() | 3k7t | 6-HYDROXY-L-NICOTINEOXIDASE (Paenarthrobacternicotinovorans) |
PF01593(Amino_oxidase) | 5 | GLY A 13PHE A 11VAL A 396ALA A 16ARG A 18 | None | 1.21A | 2avdB-3k7tA:undetectable | 2avdB-3k7tA:21.18 | ||
![]() | 3m33 | UNCHARACTERIZEDPROTEIN (Deinococcusradiodurans) |
no annotation | 5 | GLY A 57VAL A 92ALA A 87ASP A 59ALA A 60 | NoneNoneNoneGOL A 233 (-3.3A)None | 1.36A | 2avdB-3m33A:11.4 | 2avdB-3m33A:25.49 | ||
![]() | 3m9i | LENS FIBER MAJORINTRINSIC PROTEIN (Ovis aries) |
PF00230(MIP) | 5 | GLY A 96PHE A 18VAL A 67ALA A 186ALA A 97 | None | 1.31A | 2avdB-3m9iA:undetectable | 2avdB-3m9iA:24.02 | ||
![]() | 3nlc | UNCHARACTERIZEDPROTEIN VP0956 (Vibrioparahaemolyticus) |
no annotation | 5 | SER A 431GLY A 476VAL A 352ALA A 398ALA A 408 | None | 1.34A | 2avdB-3nlcA:undetectable | 2avdB-3nlcA:17.78 | ||
![]() | 3qk7 | TRANSCRIPTIONALREGULATORS (Yersinia pestis) |
PF00532(Peripla_BP_1) | 5 | GLY A 173VAL A 202ALA A 177ASP A 168ALA A 167 | None | 1.17A | 2avdB-3qk7A:2.2 | 2avdB-3qk7A:22.82 | ||
![]() | 3r3h | O-METHYLTRANSFERASE,SAM-DEPENDENT (Legionellapneumophila) |
PF01596(Methyltransf_3) | 6 | GLY A 68TYR A 73ALA A 121ASP A 143ALA A 144TYR A 152 | None | 0.76A | 2avdB-3r3hA:30.1 | 2avdB-3r3hA:40.24 | ||
![]() | 3rr5 | DNA LIGASE (Thermococcussp. 1519) |
PF01068(DNA_ligase_A_M)PF04675(DNA_ligase_A_N)PF04679(DNA_ligase_A_C) | 5 | GLY A 309TYR A 278ALA A 385TYR A 261ARG A 280 | NoneNoneNoneNone MG A 601 ( 4.4A) | 1.35A | 2avdB-3rr5A:undetectable | 2avdB-3rr5A:18.10 | ||
![]() | 3tfw | PUTATIVEO-METHYLTRANSFERASE (Klebsiellapneumoniae) |
PF01596(Methyltransf_3) | 6 | GLY A 69TYR A 74ALA A 122ASP A 141ALA A 142TYR A 150 | None | 0.67A | 2avdB-3tfwA:27.0 | 2avdB-3tfwA:30.12 | ||
![]() | 3tr6 | O-METHYLTRANSFERASE (Coxiellaburnetii) |
PF01596(Methyltransf_3) | 8 | GLY A 69PHE A 71TYR A 74VAL A 94ALA A 122ASP A 144ALA A 145TYR A 153 | SAH A 224 (-3.9A)SAH A 224 (-4.8A)NoneSAH A 224 (-4.7A)SAH A 224 (-3.8A) NI A 223 ( 2.5A)SAH A 224 (-3.5A)None | 0.45A | 2avdB-3tr6A:32.9 | 2avdB-3tr6A:46.72 | ||
![]() | 3vqr | PUTATIVEOXIDOREDUCTASE (Aeropyrumpernix) |
PF01266(DAO) | 5 | GLY A 388TYR A 404VAL A 362ALA A 229ALA A 18 | None | 1.13A | 2avdB-3vqrA:2.9 | 2avdB-3vqrA:20.09 | ||
![]() | 3w1g | DNA LIGASE 4 (Homo sapiens) |
PF01068(DNA_ligase_A_M)PF04675(DNA_ligase_A_N)PF04679(DNA_ligase_A_C) | 5 | MET A 279TYR A 290VAL A 217ASP A 329ARG A 278 | NoneNoneNoneNoneATP A 701 (-4.3A) | 1.33A | 2avdB-3w1gA:undetectable | 2avdB-3w1gA:16.26 | ||
![]() | 4am3 | POLYRIBONUCLEOTIDENUCLEOTIDYLTRANSFERASE (Caulobactervibrioides) |
PF00013(KH_1)PF01138(RNase_PH)PF03725(RNase_PH_C)PF03726(PNPase) | 5 | GLY A 29PHE A 46VAL A 113ALA A 42ALA A 137 | None | 1.31A | 2avdB-4am3A:undetectable | 2avdB-4am3A:16.90 | ||
![]() | 4b1l | LEVANASE (Bacillussubtilis) |
PF06439(DUF1080) | 5 | GLY A 573VAL A 622ALA A 668ASP A 665ALA A 666 | None | 1.19A | 2avdB-4b1lA:undetectable | 2avdB-4b1lA:17.98 | ||
![]() | 4be3 | ALGINATE LYASE,FAMILY PL7 (Zobelliagalactanivorans) |
PF08787(Alginate_lyase2) | 5 | GLY A 133TYR A 333VAL A 137ALA A 208ASP A 318 | None | 1.42A | 2avdB-4be3A:undetectable | 2avdB-4be3A:17.13 | ||
![]() | 4cvu | BETA-MANNOSIDASE (Trichodermaharzianum) |
PF00703(Glyco_hydro_2) | 5 | SER A 694GLY A 796VAL A 765ALA A 797ARG A 699 | NoneNoneNoneNoneNAG A1974 (-3.8A) | 1.35A | 2avdB-4cvuA:undetectable | 2avdB-4cvuA:12.66 | ||
![]() | 4fgv | CHROMOSOME REGIONMAINTENANCE 1 (CRM1)OR EXPORTIN 1 (XPO1) (Chaetomiumthermophilum) |
PF03810(IBN_N)PF08389(Xpo1)PF08767(CRM1_C) | 5 | GLY A 733VAL A 789ASP A 732ALA A 736ARG A 731 | None | 1.31A | 2avdB-4fgvA:undetectable | 2avdB-4fgvA:12.72 | ||
![]() | 4h19 | MANDELATE RACEMASE (Agrobacteriumfabrum) |
PF02746(MR_MLE_N)PF13378(MR_MLE_C) | 5 | GLY A 45VAL A 6ALA A 35ASP A 116ALA A 113 | None | 1.42A | 2avdB-4h19A:undetectable | 2avdB-4h19A:22.67 | ||
![]() | 4iv6 | ACYL-COADEHYDROGENASE FADE3 (Mycolicibacteriumsmegmatis) |
PF00441(Acyl-CoA_dh_1)PF02770(Acyl-CoA_dh_M)PF02771(Acyl-CoA_dh_N) | 5 | PHE A 257VAL A 252ALA A 355ASP A 332ALA A 330 | None | 1.33A | 2avdB-4iv6A:undetectable | 2avdB-4iv6A:21.66 | ||
![]() | 4jb6 | 3-OXOACYL-[ACYL-CARRIER-PROTEIN]SYNTHASE 2 (Pseudomonasaeruginosa) |
PF00109(ketoacyl-synt)PF02801(Ketoacyl-synt_C) | 5 | GLY A 10VAL A 187ALA A 238ASP A 88ALA A 85 | None | 1.38A | 2avdB-4jb6A:undetectable | 2avdB-4jb6A:21.48 | ||
![]() | 4l37 | ARYLPHORIN (Bombyx mori) |
PF00372(Hemocyanin_M)PF03722(Hemocyanin_N)PF03723(Hemocyanin_C) | 5 | GLY B 217TYR B 211ALA B 145ALA B 220TYR B 224 | None | 1.38A | 2avdB-4l37B:undetectable | 2avdB-4l37B:14.76 | ||
![]() | 4m1z | MEMBRANE-ANCHOREDMYCOSIN MYCP1 (Mycolicibacteriumsmegmatis) |
PF00082(Peptidase_S8) | 5 | SER A 118MET A 117ASP A 108ALA A 113ARG A 154 | None | 1.41A | 2avdB-4m1zA:undetectable | 2avdB-4m1zA:19.95 | ||
![]() | 4m9p | FILAMIN-A (Homo sapiens) |
PF00630(Filamin) | 5 | GLY A 585VAL A 645ALA A 661ASP A 596ALA A 595 | None | 1.41A | 2avdB-4m9pA:undetectable | 2avdB-4m9pA:20.20 | ||
![]() | 4mso | SERINEHYDROXYMETHYLTRANSFERASE (Burkholderiacenocepacia) |
PF00464(SHMT) | 5 | GLY A 174ALA A 179ASP A 201ALA A 175TYR A 205 | None | 1.34A | 2avdB-4msoA:2.8 | 2avdB-4msoA:20.09 | ||
![]() | 4o1i | TRANSCRIPTIONALREGULATORY PROTEIN (Mycobacteriumtuberculosis) |
no annotation | 5 | GLY A 57VAL A 85ALA A 75ASP A 53ALA A 50 | None | 1.39A | 2avdB-4o1iA:3.0 | 2avdB-4o1iA:23.66 | ||
![]() | 4pcl | O-METHYLTRANSFERASEFAMILY PROTEIN (Anaplasmaphagocytophilum) |
PF01596(Methyltransf_3) | 5 | GLY A 64ALA A 117ASP A 136ALA A 137TYR A 145 | SAM A 301 (-3.4A)SAM A 301 (-3.3A) MN A 303 ( 2.7A)SAM A 301 ( 3.9A)None | 0.44A | 2avdB-4pclA:28.0 | 2avdB-4pclA:24.69 | ||
![]() | 4pz2 | ZMALDH (Zea mays) |
PF00171(Aldedh) | 5 | MET A 94VAL A 176ALA A 81ALA A 85ARG A 93 | None | 1.36A | 2avdB-4pz2A:4.8 | 2avdB-4pz2A:20.96 | ||
![]() | 4uym | 14-ALPHA STEROLDEMETHYLASE (Aspergillusfumigatus) |
PF00067(p450) | 5 | SER A 283PHE A 149VAL A 134ALA A 303ASP A 276 | NoneNoneNoneVOR A 590 ( 4.4A)None | 1.25A | 2avdB-4uymA:undetectable | 2avdB-4uymA:19.26 | ||
![]() | 4wzz | PUTATIVE SUGAR ABCTRANSPORTER,SUBSTRATE-BINDINGPROTEIN (Lachnoclostridiumphytofermentans) |
PF13407(Peripla_BP_4) | 5 | MET A 249GLY A 268VAL A 239ALA A 166TYR A 289 | None | 1.35A | 2avdB-4wzzA:undetectable | 2avdB-4wzzA:19.95 | ||
![]() | 4xr9 | CALS8 (Micromonosporaechinospora) |
PF00984(UDPG_MGDP_dh)PF03720(UDPG_MGDP_dh_C)PF03721(UDPG_MGDP_dh_N) | 5 | MET A 431GLY A 336ALA A 372ALA A 338ARG A 430 | NoneNoneNoneNoneTMP A 503 (-3.2A) | 1.37A | 2avdB-4xr9A:4.7 | 2avdB-4xr9A:21.35 | ||
![]() | 4ymg | PUTATIVESAM-DEPENDENTO-METHYLTRANFERASE (Podosporaanserina) |
PF01596(Methyltransf_3) | 7 | MET A 48GLY A 73TYR A 78ALA A 127ASP A 144ALA A 145TYR A 153 | SAM A1001 (-4.8A)SAM A1001 (-3.3A)NoneSAM A1001 (-3.4A)SAM A1001 (-3.6A)SAM A1001 ( 3.5A)None | 0.83A | 2avdB-4ymgA:24.6 | 2avdB-4ymgA:27.86 | ||
![]() | 4yyf | BETA-N-ACETYLHEXOSAMINIDASE (Mycolicibacteriumsmegmatis) |
PF00933(Glyco_hydro_3) | 5 | PHE A 305VAL A 291ALA A 336ASP A 339ALA A 338 | None | 1.39A | 2avdB-4yyfA:undetectable | 2avdB-4yyfA:21.73 | ||
![]() | 4zas | CALS13 (Micromonosporaechinospora) |
PF01041(DegT_DnrJ_EryC1) | 5 | MET A 307GLY A 145PHE A 305ALA A 177TYR A 196 | None | 1.27A | 2avdB-4zasA:undetectable | 2avdB-4zasA:21.89 | ||
![]() | 4zow | MULTIDRUGTRANSPORTER MDFA (Escherichiacoli) |
PF07690(MFS_1) | 5 | MET A 85GLY A 187PHE A 185ALA A 191ARG A 82 | None | 1.24A | 2avdB-4zowA:undetectable | 2avdB-4zowA:22.19 | ||
![]() | 5a65 | THIAMINETRIPHOSPHATASE (Mus musculus) |
PF01928(CYTH) | 5 | SER A 127GLY A 156ALA A 190ASP A 147ARG A 125 | NoneNoneNoneNonePO4 A1001 (-3.0A) | 1.36A | 2avdB-5a65A:undetectable | 2avdB-5a65A:23.55 | ||
![]() | 5ey9 | LONG-CHAIN-FATTY-ACID--AMP LIGASE FADD32 (Mycobacteriummarinum) |
PF00501(AMP-binding) | 5 | GLY A 244VAL A 25ALA A 37ALA A 240TYR A 38 | None | 1.41A | 2avdB-5ey9A:undetectable | 2avdB-5ey9A:18.54 | ||
![]() | 5grv | HOMO-SPECIFICDIABODY LIGHT CHAINHOMO-SPECIFICDIABODY HEAVY CHAIN (Homo sapiens;Homo sapiens) |
PF07686(V-set)PF07686(V-set) | 5 | GLY L 103ALA K 158ASP L 106ALA L 104TYR K 160 | None | 1.15A | 2avdB-5grvL:undetectable | 2avdB-5grvL:20.80 | ||
![]() | 5i1w | CRMK (Actinoalloteichussp. WH1-2216-6) |
PF01565(FAD_binding_4)PF08031(BBE) | 5 | GLY A 444VAL A 435ASP A 346ALA A 445TYR A 470 | None | 1.33A | 2avdB-5i1wA:undetectable | 2avdB-5i1wA:19.80 | ||
![]() | 5i68 | ALCOHOL OXIDASE 1 (Komagataellapastoris) |
PF00732(GMC_oxred_N)PF05199(GMC_oxred_C) | 5 | MET A 416GLY A 400PHE A 401TYR A 316VAL A 329 | None | 1.38A | 2avdB-5i68A:undetectable | 2avdB-5i68A:16.41 | ||
![]() | 5idb | NATTERIN-3 (Crassostreagigas) |
no annotation | 5 | GLY B 42TYR B 100ALA B 51ALA B 31TYR B 65 | None | 1.10A | 2avdB-5idbB:undetectable | 2avdB-5idbB:21.10 | ||
![]() | 5k9t | PROTEIN TRANSLOCASESUBUNIT SECA (Escherichiacoli) |
PF01043(SecA_PP_bind)PF07517(SecA_DEAD) | 5 | GLY A 177VAL A 128ALA A 140ASP A 133ALA A 136 | None | 1.36A | 2avdB-5k9tA:undetectable | 2avdB-5k9tA:17.27 | ||
![]() | 5kva | CAFFEOYL-COAO-METHYLTRANSFERASE (Sorghum bicolor) |
PF01596(Methyltransf_3) | 6 | GLY A 101TYR A 106ALA A 154ASP A 177ALA A 178TYR A 186 | SAM A 301 (-3.4A)NoneSAM A 301 (-3.7A) CA A 302 ( 2.2A)SAM A 301 (-3.7A)None | 0.71A | 2avdB-5kvaA:30.8 | 2avdB-5kvaA:33.33 | ||
![]() | 5l0w | SEC72 (Chaetomiumthermophilum) |
no annotation | 5 | GLY B 93ALA B 132ASP B 94ALA B 95TYR B 99 | None | 1.40A | 2avdB-5l0wB:undetectable | 2avdB-5l0wB:23.79 | ||
![]() | 5l0y | SEC72-SSA1C-TERMINAL PEPTIDEFUSION PROTEIN (Saccharomycescerevisiae;Chaetomiumthermophilum) |
no annotation | 5 | GLY A 93ALA A 132ASP A 94ALA A 95TYR A 99 | None | 1.41A | 2avdB-5l0yA:undetectable | 2avdB-5l0yA:23.50 | ||
![]() | 5log | PUTATIVEO-METHYLTRANSFERASE (Myxococcusxanthus) |
PF01596(Methyltransf_3) | 7 | GLY A 67PHE A 69TYR A 72ALA A 120ASP A 142ALA A 143TYR A 151 | SAH A1001 (-3.5A)NoneNoneSAH A1001 (-3.4A) MG A1002 (-2.5A)SAH A1001 (-3.7A)None | 0.56A | 2avdB-5logA:33.0 | 2avdB-5logA:41.30 | ||
![]() | 5mt2 | BETA-GALACTOSIDASE (Bacteroidesthetaiotaomicron) |
no annotation | 5 | GLY A 358TYR A 79ALA A 360ALA A 350TYR A 327 | None | 1.37A | 2avdB-5mt2A:undetectable | 2avdB-5mt2A:19.12 | ||
![]() | 5n5d | METHYLTRANSFERASE (Streptomycesregensis) |
PF01596(Methyltransf_3) | 7 | GLY A 65PHE A 67TYR A 70ALA A 118ASP A 139ALA A 140TYR A 148 | SAM A 306 (-3.2A)SAM A 306 (-4.2A)NoneSAM A 306 (-3.5A)SAM A 306 (-2.3A)SAM A 306 (-3.6A)None | 0.56A | 2avdB-5n5dA:28.0 | 2avdB-5n5dA:34.60 | ||
![]() | 5nnp | N-TERMINALACETYLTRANSFERASE-LIKE PROTEIN (Chaetomiumthermophilum) |
PF12569(NARP1)PF13432(TPR_16) | 5 | GLY A 201ASP A 202ALA A 198TYR A 230ARG A 205 | NoneNoneNoneNoneGOL A 804 (-3.9A) | 1.36A | 2avdB-5nnpA:undetectable | 2avdB-5nnpA:16.41 | ||
![]() | 5t13 | CYANURIC ACIDAMIDOHYDROLASE (Enterobactercloacae) |
PF09663(Amido_AtzD_TrzD) | 5 | GLY A 360ALA A 302ASP A 265ALA A 266ARG A 311 | MG A 403 (-4.5A)NoneNoneNoneNone | 1.41A | 2avdB-5t13A:undetectable | 2avdB-5t13A:19.95 | ||
![]() | 5t3y | TWO-COMPONENT SYSTEMRESPONSE REGULATOR (Burkholderiamultivorans) |
PF00072(Response_reg) | 5 | GLY A 38TYR A 74ALA A 33ASP A 40ALA A 37 | None | 1.38A | 2avdB-5t3yA:undetectable | 2avdB-5t3yA:20.85 | ||
![]() | 5x7f | PUTATIVEO-METHYLTRANSFERASERV1220C (Mycobacteriumtuberculosis) |
PF01596(Methyltransf_3) | 5 | GLY A 66ALA A 120ASP A 138ALA A 139TYR A 147 | SAM A 301 (-3.5A)SAM A 301 (-3.5A)SAM A 301 (-3.6A)SAM A 301 (-3.5A)None | 0.46A | 2avdB-5x7fA:27.7 | 2avdB-5x7fA:30.33 | ||
![]() | 5xbp | 3NT OXYGENASE ALPHASUBUNIT (Diaphorobactersp. DS2) |
PF00355(Rieske)PF00848(Ring_hydroxyl_A) | 5 | SER A 410MET A 240GLY A 405TYR A 167ALA A 406 | None | 1.22A | 2avdB-5xbpA:undetectable | 2avdB-5xbpA:18.76 | ||
![]() | 5xvi | GLUTAMATEDEHYDROGENASE (Aspergillusniger) |
no annotation | 5 | GLY A 375VAL A 438ALA A 373ALA A 377TYR A 204 | None | 1.23A | 2avdB-5xviA:undetectable | 2avdB-5xviA:undetectable | ||
![]() | 5xvi | GLUTAMATEDEHYDROGENASE (Aspergillusniger) |
no annotation | 5 | PHE A 101VAL A 438ALA A 373ALA A 377TYR A 204 | None | 1.33A | 2avdB-5xviA:undetectable | 2avdB-5xviA:undetectable | ||
![]() | 5zw4 | PUTATIVEO-METHYLTRANSFERASEYRRM (Bacillussubtilis) |
no annotation | 6 | MET A 38GLY A 62TYR A 67ALA A 114ASP A 133ALA A 134 | NoneSAM A 302 (-3.4A)NoneSAM A 302 (-3.7A)SAM A 302 (-3.6A)SAM A 302 (-3.4A) | 0.94A | 2avdB-5zw4A:24.5 | 2avdB-5zw4A:28.24 | ||
![]() | 6aun | PLA2G6, IPLA2BETA (Cricetulusgriseus) |
no annotation | 5 | GLY A 266VAL A 236ALA A 259ALA A 268ARG A 306 | None | 1.42A | 2avdB-6aunA:undetectable | 2avdB-6aunA:undetectable | ||
![]() | 6azi | D-ALANYL-D-ALANINEENDOPEPTIDASE (Enterobactercloacae) |
PF00768(Peptidase_S11) | 5 | GLY A 240PHE A 262ALA A 67ASP A 260ALA A 239 | NoneNoneSEE A 68 ( 2.7A)NoneNone | 1.16A | 2avdB-6aziA:undetectable | 2avdB-6aziA:21.36 | ||
![]() | 6b6l | GLYCOSYL HYDROLASEFAMILY 2, SUGARBINDING DOMAINPROTEIN (Bacteroidescellulosilyticus) |
no annotation | 5 | GLY A 557PHE A 607TYR A 570ASP A 558ARG A 572 | NoneNoneNoneEDO A 802 (-3.6A)None | 1.38A | 2avdB-6b6lA:undetectable | 2avdB-6b6lA:14.03 | ||
![]() | 6byx | SHORT ULVAN LYASE (Alteromonas sp.LOR) |
no annotation | 5 | GLY A 88ALA A 86ASP A 89ALA A 90TYR A 499 | None | 1.11A | 2avdB-6byxA:undetectable | 2avdB-6byxA:undetectable | ||
![]() | 6h25 | - (-) |
no annotation | 5 | GLY D 43VAL D 118ALA D 56ASP D 143ALA D 140 | None | 1.23A | 2avdB-6h25D:undetectable | 2avdB-6h25D:undetectable | ||
![]() | 1b3j | MHC CLASS I HOMOLOGMIC-A (Homo sapiens) |
PF00129(MHC_I)PF07654(C1-set) | 3 | SER A 174GLU A 62ASP A 163 | None | 0.84A | 2avdB-1b3jA:undetectable | 2avdB-1b3jA:25.09 | ||
![]() | 1bou | 4,5-DIOXYGENASEALPHA CHAIN (Sphingomonaspaucimobilis) |
PF07746(LigA) | 3 | SER A 43GLU A 63ASP A 56 | None | 0.82A | 2avdB-1bouA:undetectable | 2avdB-1bouA:20.10 | ||
![]() | 1ev1 | ECHOVIRUS 1ECHOVIRUS 1 (Enterovirus B;Enterovirus B) |
PF00073(Rhv)PF00073(Rhv) | 3 | SER 1 62GLU 3 48ASP 3 220 | None | 0.76A | 2avdB-1ev11:undetectable | 2avdB-1ev11:18.97 | ||
![]() | 1ey1 | ANTITERMINATIONFACTOR NUSB (Escherichiacoli) |
PF01029(NusB) | 3 | SER A 71GLU A 81ASP A 118 | None | 0.90A | 2avdB-1ey1A:undetectable | 2avdB-1ey1A:24.89 | ||
![]() | 1hjo | PROTEIN (HEAT-SHOCK70KD PROTEIN) (Homo sapiens) |
PF00012(HSP70) | 3 | SER A 153GLU A 117ASP A 97 | None | 0.91A | 2avdB-1hjoA:undetectable | 2avdB-1hjoA:19.36 | ||
![]() | 1hxm | GAMMA-DELTA T-CELLRECEPTOR (Homo sapiens) |
PF07654(C1-set)PF07686(V-set) | 3 | SER B 179GLU B 169ASP B 222 | None | 0.85A | 2avdB-1hxmB:undetectable | 2avdB-1hxmB:20.99 | ||
![]() | 1m1c | MAJOR COAT PROTEIN (Saccharomycescerevisiaevirus L-A) |
PF09220(LA-virus_coat) | 3 | SER A 424GLU A 71ASP A 81 | None | 0.87A | 2avdB-1m1cA:undetectable | 2avdB-1m1cA:18.65 | ||
![]() | 1m22 | PEPTIDE AMIDASE (Stenotrophomonasmaltophilia) |
PF01425(Amidase) | 3 | SER A 64GLU A 105ASP A 156 | None | 0.85A | 2avdB-1m22A:undetectable | 2avdB-1m22A:19.76 | ||
![]() | 1m2p | CASEIN KINASE II,ALPHA CHAIN (Zea mays) |
PF00069(Pkinase) | 3 | SER A 7GLU A 201ASP A 214 | None | 0.79A | 2avdB-1m2pA:undetectable | 2avdB-1m2pA:20.48 | ||
![]() | 1mqt | POLYPROTEINPOLYPROTEIN CAPSIDPROTEIN (Enterovirus B;Enterovirus B) |
PF00073(Rhv)PF00073(Rhv) | 3 | SER A 62GLU C 48ASP C 219 | None | 0.70A | 2avdB-1mqtA:undetectable | 2avdB-1mqtA:19.80 | ||
![]() | 1qjm | LACTOFERRIN (Equus caballus) |
PF00405(Transferrin) | 3 | SER A 634GLU A 413ASP A 395 | NoneNoneCO3 A 693 ( 2.7A) | 0.91A | 2avdB-1qjmA:undetectable | 2avdB-1qjmA:16.67 | ||
![]() | 1r3d | CONSERVEDHYPOTHETICAL PROTEINVC1974 (Vibrio cholerae) |
PF12697(Abhydrolase_6) | 3 | SER A 163GLU A 117ASP A 30 | None | 0.82A | 2avdB-1r3dA:2.6 | 2avdB-1r3dA:22.71 | ||
![]() | 1u2v | ACTIN-RELATEDPROTEIN 3 (Bos taurus) |
PF00022(Actin) | 3 | SER A 297GLU A 280ASP A 237 | None | 0.63A | 2avdB-1u2vA:undetectable | 2avdB-1u2vA:19.22 | ||
![]() | 1v9k | RIBOSOMAL LARGESUBUNITPSEUDOURIDINESYNTHASE C (Escherichiacoli) |
PF00849(PseudoU_synth_2) | 3 | SER A 120GLU A 204ASP A 144 | None | 0.56A | 2avdB-1v9kA:undetectable | 2avdB-1v9kA:23.75 | ||
![]() | 1xog | NEURAMINIDASE (Influenza Avirus) |
PF00064(Neur) | 3 | SER A 447GLU A 231ASP A 126 | None | 0.70A | 2avdB-1xogA:undetectable | 2avdB-1xogA:19.95 | ||
![]() | 1y3n | ALGQ1 (Sphingomonassp. A1) |
PF01547(SBP_bac_1) | 3 | SER A 202GLU A 305ASP A 269 | None | 0.65A | 2avdB-1y3nA:undetectable | 2avdB-1y3nA:17.94 | ||
![]() | 1ylo | HYPOTHETICAL PROTEINSF2450 (Shigellaflexneri) |
PF05343(Peptidase_M42) | 3 | SER A 170GLU A 198ASP A 249 | None ZN A1446 ( 4.6A)None | 0.73A | 2avdB-1yloA:undetectable | 2avdB-1yloA:19.71 | ||
![]() | 2ahw | PUTATIVE ENZYME YDIF (Escherichiacoli) |
PF01144(CoA_trans) | 3 | SER A 67GLU A 42ASP A 73 | None | 0.77A | 2avdB-2ahwA:undetectable | 2avdB-2ahwA:18.68 | ||
![]() | 2avd | CATECHOL-O-METHYLTRANSFERASE (Homo sapiens) |
PF01596(Methyltransf_3) | 3 | SER A 116GLU A 134ASP A 187 | SAM A 501 (-3.0A)SAM A 501 (-2.9A)SAM A 501 (-3.8A) | 0.09A | 2avdB-2avdA:40.7 | 2avdB-2avdA:100.00 | ||
![]() | 2cxj | S100 CALCIUM-BINDINGPROTEIN A13 (Mus musculus) |
PF01023(S_100) | 3 | SER A 69GLU A 86ASP A 52 | None | 0.78A | 2avdB-2cxjA:undetectable | 2avdB-2cxjA:17.90 | ||
![]() | 2d3i | OVOTRANSFERRIN (Gallus gallus) |
PF00405(Transferrin) | 3 | SER A 630GLU A 413ASP A 395 | NoneNone AL A 689 ( 3.0A) | 0.87A | 2avdB-2d3iA:undetectable | 2avdB-2d3iA:14.97 | ||
![]() | 2db3 | ATP-DEPENDENT RNAHELICASE VASA (Drosophilamelanogaster) |
PF00270(DEAD)PF00271(Helicase_C) | 3 | SER A 293GLU A 400ASP A 571 | ANP A2901 (-3.8A)ANP A2901 (-4.3A)None | 0.89A | 2avdB-2db3A:4.2 | 2avdB-2db3A:20.56 | ||
![]() | 2eho | GINS COMPLEX SUBUNIT3 (Homo sapiens) |
PF05916(Sld5) | 3 | SER D 152GLU D 172ASP D 108 | None | 0.69A | 2avdB-2ehoD:undetectable | 2avdB-2ehoD:21.86 | ||
![]() | 2epg | HYPOTHETICAL PROTEINTTHA1785 (Thermusthermophilus) |
PF01139(RtcB) | 3 | SER A 397GLU A 457ASP A 216 | None | 0.75A | 2avdB-2epgA:undetectable | 2avdB-2epgA:18.22 | ||
![]() | 2ije | GUANINENUCLEOTIDE-RELEASINGPROTEIN (Mus musculus) |
PF00617(RasGEF) | 3 | SER S1124GLU S1085ASP S1239 | None | 0.77A | 2avdB-2ijeS:undetectable | 2avdB-2ijeS:20.61 | ||
![]() | 2inp | PHENOL HYDROXYLASECOMPONENT PHN (Pseudomonasstutzeri) |
PF02332(Phenol_Hydrox)PF04945(YHS) | 3 | SER A 89GLU A 357ASP A 281 | None | 0.76A | 2avdB-2inpA:undetectable | 2avdB-2inpA:16.98 | ||
![]() | 2nzu | CATABOLITE CONTROLPROTEINPHOSPHOCARRIERPROTEIN HPR (Bacillusmegaterium;Bacillusmegaterium) |
PF13377(Peripla_BP_3)PF00381(PTS-HPr) | 3 | SER L 12GLU G 77ASP G 84 | SO4 L 975 (-4.0A)NoneNone | 0.88A | 2avdB-2nzuL:undetectable | 2avdB-2nzuL:14.80 | ||
![]() | 2rag | DIPEPTIDASE (Caulobactervibrioides) |
PF01244(Peptidase_M19) | 3 | SER A 282GLU A 371ASP A 326 | None | 0.83A | 2avdB-2ragA:undetectable | 2avdB-2ragA:18.84 | ||
![]() | 2rmn | TUMOR PROTEIN 63 (Homo sapiens) |
PF00870(P53) | 3 | SER A 271GLU A 302ASP A 316 | None | 0.54A | 2avdB-2rmnA:undetectable | 2avdB-2rmnA:22.09 | ||
![]() | 2w1v | NITRILASE HOMOLOG 2 (Mus musculus) |
PF00795(CN_hydrolase) | 3 | SER A 78GLU A 81ASP A 193 | None | 0.84A | 2avdB-2w1vA:undetectable | 2avdB-2w1vA:21.14 | ||
![]() | 2wa2 | NON-STRUCTURALPROTEIN 5 (Modoc virus) |
PF01728(FtsJ) | 3 | SER A 239GLU A 11ASP A 192 | None | 0.87A | 2avdB-2wa2A:9.3 | 2avdB-2wa2A:23.38 | ||
![]() | 2zkg | E3 UBIQUITIN-PROTEINLIGASE UHRF1 (Mus musculus) |
PF02182(SAD_SRA) | 3 | SER A 575GLU A 571ASP A 474 | None | 0.83A | 2avdB-2zkgA:undetectable | 2avdB-2zkgA:22.05 | ||
![]() | 3c1o | EUGENOL SYNTHASE (Clarkia breweri) |
PF05368(NmrA) | 3 | SER A 266GLU A 125ASP A 116 | None | 0.72A | 2avdB-3c1oA:6.6 | 2avdB-3c1oA:21.92 | ||
![]() | 3cih | PUTATIVEALPHA-RHAMNOSIDASE (Bacteroidesthetaiotaomicron) |
PF17389(Bac_rhamnosid6H)PF17390(Bac_rhamnosid_C) | 3 | SER A 463GLU A 456ASP A 436 | None | 0.80A | 2avdB-3cihA:undetectable | 2avdB-3cihA:14.97 | ||
![]() | 3dg7 | MUCONATECYCLOISOMERASE (Mycolicibacteriumsmegmatis) |
PF02746(MR_MLE_N)PF13378(MR_MLE_C) | 3 | SER A 201GLU A 218ASP A 223 | None | 0.90A | 2avdB-3dg7A:undetectable | 2avdB-3dg7A:21.56 | ||
![]() | 3e5d | PUTATIVE GLYOXALASEI (Listeriamonocytogenes) |
PF00903(Glyoxalase) | 3 | SER A 112GLU A 89ASP A 94 | None | 0.83A | 2avdB-3e5dA:undetectable | 2avdB-3e5dA:19.82 | ||
![]() | 3ekm | DIAMINOPIMELATEEPIMERASE,CHLOROPLASTIC (Arabidopsisthaliana) |
PF01678(DAP_epimerase) | 3 | SER A 94GLU A 245ASP A 38 | NoneZDR A 500 (-3.0A)None | 0.91A | 2avdB-3ekmA:undetectable | 2avdB-3ekmA:20.68 | ||
![]() | 3eno | PUTATIVEO-SIALOGLYCOPROTEINENDOPEPTIDASE (Thermoplasmaacidophilum) |
PF00814(Peptidase_M22) | 3 | SER A 300GLU A 113ASP A 123 | None | 0.69A | 2avdB-3enoA:undetectable | 2avdB-3enoA:22.35 | ||
![]() | 3faw | RETICULOCYTE BINDINGPROTEIN (Streptococcusagalactiae) |
PF00128(Alpha-amylase)PF02922(CBM_48) | 3 | SER A 568GLU A 571ASP A 511 | None | 0.76A | 2avdB-3fawA:undetectable | 2avdB-3fawA:14.03 | ||
![]() | 3h7l | ENDOGLUCANASE (Vibrioparahaemolyticus) |
PF00759(Glyco_hydro_9)PF02927(CelD_N) | 3 | SER A 73GLU A 11ASP A 182 | None | 0.72A | 2avdB-3h7lA:undetectable | 2avdB-3h7lA:17.93 | ||
![]() | 3hbj | FLAVONOID3-O-GLUCOSYLTRANSFERASE (Medicagotruncatula) |
PF00201(UDPGT) | 3 | SER A 353GLU A 385ASP A 395 | None | 0.69A | 2avdB-3hbjA:5.2 | 2avdB-3hbjA:21.16 | ||
![]() | 3igq | GLR4197 PROTEIN (Gloeobacterviolaceus) |
PF02931(Neur_chan_LBD) | 3 | SER A 107GLU A 82ASP A 31 | None | 0.91A | 2avdB-3igqA:undetectable | 2avdB-3igqA:20.55 | ||
![]() | 3ixw | HEMOCYANIN AA6 CHAIN (Androctonusaustralis) |
PF00372(Hemocyanin_M)PF03722(Hemocyanin_N)PF03723(Hemocyanin_C) | 3 | SER A 524GLU A 529ASP A 585 | None | 0.83A | 2avdB-3ixwA:undetectable | 2avdB-3ixwA:16.05 | ||
![]() | 3k9d | ALDEHYDEDEHYDROGENASE (Listeriamonocytogenes) |
PF00171(Aldedh) | 3 | SER A 362GLU A 260ASP A 381 | None | 0.81A | 2avdB-3k9dA:4.9 | 2avdB-3k9dA:17.56 | ||
![]() | 3mc2 | INHIBITOR OFCARBONIC ANHYDRASE (Mus musculus) |
PF00405(Transferrin) | 3 | SER A 626GLU A 404ASP A 386 | None | 0.74A | 2avdB-3mc2A:undetectable | 2avdB-3mc2A:17.90 | ||
![]() | 3meb | ASPARTATEAMINOTRANSFERASE (Giardiaintestinalis) |
PF00155(Aminotran_1_2) | 3 | SER A 286GLU A 96ASP A 243 | NoneNoneEDO A 505 (-3.6A) | 0.88A | 2avdB-3mebA:2.4 | 2avdB-3mebA:20.76 | ||
![]() | 3mga | ENTEROCHELINESTERASE (Salmonellaenterica) |
PF00756(Esterase)PF11806(DUF3327) | 3 | SER A 291GLU A 248ASP A 238 | None | 0.81A | 2avdB-3mgaA:undetectable | 2avdB-3mgaA:23.51 | ||
![]() | 3mgx | PUTATIVE P450MONOOXYGENASE (Amycolatopsisbalhimycina) |
PF00067(p450) | 3 | SER A 280GLU A 274ASP A 322 | None | 0.90A | 2avdB-3mgxA:undetectable | 2avdB-3mgxA:22.49 | ||
![]() | 3nvq | SEMAPHORIN-7A (Homo sapiens) |
PF01403(Sema)PF01437(PSI)PF13895(Ig_2) | 3 | SER A 520GLU A 102ASP A 471 | None | 0.53A | 2avdB-3nvqA:undetectable | 2avdB-3nvqA:17.15 | ||
![]() | 3oum | TOXOFLAVIN-DEGRADINGENZYME (Paenibacilluspolymyxa) |
PF00903(Glyoxalase) | 3 | SER A 116GLU A 72ASP A 125 | None | 0.81A | 2avdB-3oumA:undetectable | 2avdB-3oumA:22.45 | ||
![]() | 3tho | EXONUCLEASE,PUTATIVE (Thermotogamaritima) |
PF00149(Metallophos) | 3 | SER B 21GLU B 242ASP B 14 | NoneNone MN B 1 (-3.7A) | 0.90A | 2avdB-3thoB:undetectable | 2avdB-3thoB:22.16 | ||
![]() | 3tlm | SARCOPLASMIC/ENDOPLASMIC RETICULUMCALCIUM ATPASE 1 (Bos taurus) |
PF00122(E1-E2_ATPase)PF00689(Cation_ATPase_C)PF00690(Cation_ATPase_N)PF08282(Hydrolase_3)PF13246(Cation_ATPase) | 3 | SER A 404GLU A 394ASP A 399 | None | 0.86A | 2avdB-3tlmA:undetectable | 2avdB-3tlmA:11.83 | ||
![]() | 3tx7 | NUCLEAR RECEPTORSUBFAMILY 5 GROUP AMEMBER 2 (Homo sapiens) |
PF00104(Hormone_recep) | 3 | SER B 362GLU B 312ASP B 389 | None | 0.78A | 2avdB-3tx7B:undetectable | 2avdB-3tx7B:20.82 | ||
![]() | 3u1k | POLYRIBONUCLEOTIDENUCLEOTIDYLTRANSFERASE 1, MITOCHONDRIAL (Homo sapiens) |
PF00013(KH_1)PF01138(RNase_PH)PF03725(RNase_PH_C)PF03726(PNPase) | 3 | SER A 503GLU A 234ASP A 420 | None | 0.87A | 2avdB-3u1kA:undetectable | 2avdB-3u1kA:17.66 | ||
![]() | 3u4a | JMB19063 (compostmetagenome) |
PF00933(Glyco_hydro_3)PF01915(Glyco_hydro_3_C)PF14310(Fn3-like) | 3 | SER A 649GLU A 656ASP A 727 | None | 0.60A | 2avdB-3u4aA:undetectable | 2avdB-3u4aA:15.06 | ||
![]() | 3wec | CYTOCHROME P450 (Rhodococcuserythropolis) |
PF00067(p450) | 3 | SER A 179GLU A 159ASP A 169 | None | 0.83A | 2avdB-3wecA:undetectable | 2avdB-3wecA:21.79 | ||
![]() | 3wj7 | PUTATIVEOXIDOREDUCTASE (Gluconobacteroxydans) |
PF01370(Epimerase) | 3 | SER A 179GLU A 242ASP A 323 | None | 0.82A | 2avdB-3wj7A:5.9 | 2avdB-3wj7A:22.35 | ||
![]() | 4a2q | RETINOIC ACIDINDUCIBLE PROTEIN I (Anasplatyrhynchos) |
PF00270(DEAD)PF00271(Helicase_C)PF16739(CARD_2) | 3 | SER A 642GLU A 570ASP A 117 | None | 0.88A | 2avdB-4a2qA:undetectable | 2avdB-4a2qA:14.92 | ||
![]() | 4aio | LIMIT DEXTRINASE (Hordeum vulgare) |
PF02922(CBM_48)PF11852(DUF3372) | 3 | SER A 445GLU A 516ASP A 513 | None | 0.90A | 2avdB-4aioA:undetectable | 2avdB-4aioA:14.40 | ||
![]() | 4bed | HEMOCYANIN KLH1 (Megathuracrenulata) |
PF00264(Tyrosinase)PF14830(Haemocyan_bet_s) | 3 | SER B2990GLU B2919ASP B3175 | None | 0.69A | 2avdB-4bedB:undetectable | 2avdB-4bedB:8.67 | ||
![]() | 4bl0 | CELL CYCLE ARRESTPROTEIN BUB3CHECKPOINTSERINE/THREONINE-PROTEIN KINASE BUB1 (Saccharomycescerevisiae;Saccharomycescerevisiae) |
PF00400(WD40)PF08171(Mad3_BUB1_II) | 3 | SER A 312GLU B 337ASP A 198 | NoneNone MG A1341 (-2.9A) | 0.74A | 2avdB-4bl0A:undetectable | 2avdB-4bl0A:20.55 | ||
![]() | 4eg2 | CYTIDINE DEAMINASE (Vibrio cholerae) |
PF00383(dCMP_cyt_deam_1)PF08211(dCMP_cyt_deam_2) | 3 | SER A 164GLU A 138ASP A 173 | None | 0.86A | 2avdB-4eg2A:undetectable | 2avdB-4eg2A:24.61 | ||
![]() | 4euf | PUTATIVE REDUCTASECA_C0462 (Clostridiumacetobutylicum) |
PF07055(Eno-Rase_FAD_bd)PF12241(Enoyl_reductase)PF12242(Eno-Rase_NADH_b) | 3 | SER A 279GLU A 370ASP A 363 | NAD A1001 ( 4.9A)NoneNone | 0.90A | 2avdB-4eufA:7.0 | 2avdB-4eufA:18.82 | ||
![]() | 4fwi | ABC-TYPEDIPEPTIDE/OLIGOPEPTIDE/NICKEL TRANSPORTSYSTEM, ATPASECOMPONENT (Caldanaerobactersubterraneus) |
PF00005(ABC_tran)PF08352(oligo_HPY) | 3 | SER B 257GLU B 42ASP B 274 | None | 0.74A | 2avdB-4fwiB:undetectable | 2avdB-4fwiB:22.09 | ||
![]() | 4is8 | NUCLEAR RECEPTORSUBFAMILY 5 GROUP AMEMBER 2 (Homo sapiens) |
PF00104(Hormone_recep) | 3 | SER A 362GLU A 312ASP A 389 | None | 0.78A | 2avdB-4is8A:undetectable | 2avdB-4is8A:21.76 | ||
![]() | 4jr7 | CASEIN KINASE IISUBUNIT ALPHA (Saccharomycescerevisiae) |
PF00069(Pkinase) | 3 | SER A 7GLU A 240ASP A 253 | None | 0.74A | 2avdB-4jr7A:undetectable | 2avdB-4jr7A:18.55 | ||
![]() | 4lg4 | SERINE/THREONINE-PROTEIN KINASE 3 (Homo sapiens) |
PF00069(Pkinase) | 3 | SER A 88GLU A 70ASP A 63 | None | 0.84A | 2avdB-4lg4A:undetectable | 2avdB-4lg4A:18.67 | ||
![]() | 4ls3 | NICKEL (III) ABCTRANSPORTER,PERIPLASMICIRON-BINDIN GPROTEIN (Helicobacterpylori) |
PF01497(Peripla_BP_2) | 3 | SER A 59GLU A 150ASP A 211 | HIS A 601 ( 4.8A)NoneNone | 0.81A | 2avdB-4ls3A:undetectable | 2avdB-4ls3A:20.93 | ||
![]() | 4md8 | CASEIN KINASE IISUBUNIT ALPHA (Homo sapiens) |
PF00069(Pkinase) | 3 | SER E 7GLU E 201ASP E 214 | None | 0.82A | 2avdB-4md8E:undetectable | 2avdB-4md8E:18.97 | ||
![]() | 4n3s | EUKARYOTICTRANSLATIONINITIATION FACTOR 5B (Saccharomycescerevisiae) |
PF00009(GTP_EFTU)PF03144(GTP_EFTU_D2)PF11987(IF-2) | 3 | SER A 579GLU A 571ASP A 502 | None | 0.89A | 2avdB-4n3sA:undetectable | 2avdB-4n3sA:18.37 | ||
![]() | 4o2x | MALTOSE-BINDINGPERIPLASMIC PROTEIN,ATP-DEPENDENT CLPPROTEASE ADAPTORPROTEIN CLPSCONTAINING PROTEINCHIMERIC CONSTRUCT (Escherichiacoli;Plasmodiumfalciparum) |
PF02617(ClpS)PF13416(SBP_bac_8) | 3 | SER A 407GLU A 482ASP A 208 | None | 0.81A | 2avdB-4o2xA:undetectable | 2avdB-4o2xA:18.91 | ||
![]() | 4o4x | TBPB (Glaesserellaparasuis) |
PF01298(TbpB_B_D)PF17483(TbpB_C)PF17484(TbpB_A) | 3 | SER A 286GLU A 103ASP A 98 | NoneNoneGOL A 601 ( 4.4A) | 0.89A | 2avdB-4o4xA:undetectable | 2avdB-4o4xA:16.85 | ||
![]() | 4om9 | SERINE PROTEASE PET (Escherichiacoli) |
PF02395(Peptidase_S6) | 3 | SER A 27GLU A 577ASP A 447 | None | 0.88A | 2avdB-4om9A:undetectable | 2avdB-4om9A:12.50 | ||
![]() | 4ozi | T-CELL RECEPTOR, S2,BETA CHAIN (Homo sapiens) |
PF07654(C1-set)PF07686(V-set) | 3 | SER F 99GLU F 126ASP F 196 | None | 0.85A | 2avdB-4oziF:undetectable | 2avdB-4oziF:23.37 | ||
![]() | 4pet | EXTRACELLULARSOLUTE-BINDINGPROTEIN, FAMILY 7 (Colwelliapsychrerythraea) |
PF03480(DctP) | 3 | SER A 200GLU A 40ASP A 51 | None | 0.77A | 2avdB-4petA:undetectable | 2avdB-4petA:19.62 | ||
![]() | 4q4y | COXSACKIEVIRUSCAPSID PROTEIN VP1COXSACKIEVIRUSCAPSID PROTEIN VP3 (Enterovirus C;Enterovirus C) |
PF00073(Rhv)PF00073(Rhv) | 3 | SER 1 75GLU 3 48ASP 3 218 | None | 0.72A | 2avdB-4q4y1:undetectable | 2avdB-4q4y1:22.12 | ||
![]() | 4qmd | ENVOPLAKIN (Homo sapiens) |
PF00681(Plectin) | 3 | SER A1987GLU A1995ASP A1981 | None | 0.80A | 2avdB-4qmdA:undetectable | 2avdB-4qmdA:21.70 | ||
![]() | 4wbd | BSHC (Bacillussubtilis) |
PF10079(BshC) | 3 | SER A 48GLU A 339ASP A 30 | None | 0.76A | 2avdB-4wbdA:undetectable | 2avdB-4wbdA:18.08 | ||
![]() | 4xqk | LLABIII (Lactococcuslactis) |
PF00271(Helicase_C)PF02384(N6_Mtase)PF04851(ResIII)PF13156(Mrr_cat_2) | 3 | SER A 788GLU A 826ASP A 424 | None | 0.73A | 2avdB-4xqkA:10.3 | 2avdB-4xqkA:8.31 | ||
![]() | 4ydi | ENVELOPEGLYCOPROTEIN GP160HEAVY CHAIN OFANTIBODYZ258-VRC27.01LIGHT CHAIN OFANTIBODYZ258-VRC27.01 (Humanimmunodeficiencyvirus 1;Homo sapiens;Homo sapiens) |
PF00516(GP120)PF07654(C1-set)PF07686(V-set)PF07654(C1-set)PF07686(V-set) | 3 | SER H 100GLU L 96ASP G 457 | None | 0.90A | 2avdB-4ydiH:undetectable | 2avdB-4ydiH:20.08 | ||
![]() | 5a99 | POLYHEDRIN (Operophterabrumatacypovirus 19) |
no annotation | 3 | SER A 110GLU A 225ASP A 245 | None | 0.81A | 2avdB-5a99A:undetectable | 2avdB-5a99A:21.37 | ||
![]() | 5aey | PLASMID SEGREGATIONPROTEIN PARM (Escherichiacoli) |
PF06406(StbA) | 3 | SER A 195GLU A 148ASP A 7 | NoneANP A 500 (-3.2A)None | 0.91A | 2avdB-5aeyA:undetectable | 2avdB-5aeyA:22.98 | ||
![]() | 5azb | PROLIPOPROTEINDIACYLGLYCERYLTRANSFERASE (Escherichiacoli) |
PF01790(LGT) | 3 | SER A 198GLU A 243ASP A 249 | None | 0.70A | 2avdB-5azbA:undetectable | 2avdB-5azbA:22.70 | ||
![]() | 5b7i | CRISPR-ASSOCIATEDNUCLEASE/HELICASECAS3 SUBTYPEI-F/YPEST (Pseudomonasaeruginosa) |
no annotation | 3 | SER A 776GLU A1041ASP A 471 | None | 0.60A | 2avdB-5b7iA:3.2 | 2avdB-5b7iA:13.54 | ||
![]() | 5cm6 | TRAP DICARBOXYLATETRANSPORTER-DCTPSUBUNIT (Pseudoalteromonasatlantica) |
PF03480(DctP) | 3 | SER A 194GLU A 34ASP A 45 | None | 0.91A | 2avdB-5cm6A:undetectable | 2avdB-5cm6A:19.06 | ||
![]() | 5dkx | ALPHAGLUCOSIDASE-LIKEPROTEIN (Chaetomiumthermophilum) |
PF01055(Glyco_hydro_31)PF13802(Gal_mutarotas_2)PF17137(DUF5110) | 3 | SER A 258GLU A 243ASP A 40 | None | 0.72A | 2avdB-5dkxA:undetectable | 2avdB-5dkxA:11.58 | ||
![]() | 5dx5 | METHIONINEGAMMA-LYASE (Clostridiumsporogenes) |
PF01053(Cys_Met_Meta_PP) | 3 | SER A 378GLU A 346ASP A 219 | None | 0.81A | 2avdB-5dx5A:3.5 | 2avdB-5dx5A:21.13 | ||
![]() | 5ftx | SURFACE LAYERPROTEIN (Geobacillusstearothermophilus) |
no annotation | 3 | SER A 606GLU A 614ASP A 660 | NoneNone CA A2104 (-3.0A) | 0.89A | 2avdB-5ftxA:undetectable | 2avdB-5ftxA:14.24 | ||
![]() | 5h71 | ALGQ2 (Sphingomonassp.) |
PF01547(SBP_bac_1) | 3 | SER A 202GLU A 305ASP A 269 | None | 0.62A | 2avdB-5h71A:undetectable | 2avdB-5h71A:18.46 | ||
![]() | 5hh0 | N-ALPHA-ACETYLTRANSFERASE 60 (Homo sapiens) |
PF00583(Acetyltransf_1) | 3 | SER A 125GLU A 118ASP A 154 | None | 0.80A | 2avdB-5hh0A:undetectable | 2avdB-5hh0A:23.89 | ||
![]() | 5hjr | NEUTRALALPHA-GLUCOSIDASE AB (Mus musculus) |
PF01055(Glyco_hydro_31)PF13802(Gal_mutarotas_2) | 3 | SER A 265GLU A 250ASP A 42 | NoneFMT A1017 (-4.2A)None | 0.88A | 2avdB-5hjrA:undetectable | 2avdB-5hjrA:14.87 | ||
![]() | 5j68 | ASTROTACTIN-2 (Homo sapiens) |
PF01823(MACPF) | 3 | SER A1232GLU A 796ASP A1111 | None | 0.89A | 2avdB-5j68A:undetectable | 2avdB-5j68A:18.41 | ||
![]() | 5lcw | ANAPHASE-PROMOTINGCOMPLEX SUBUNIT 1 (Homo sapiens) |
PF12859(ANAPC1) | 3 | SER A1349GLU A1354ASP A1361 | None | 0.91A | 2avdB-5lcwA:undetectable | 2avdB-5lcwA:8.29 | ||
![]() | 5t76 | ALANINE--TRNALIGASE, CYTOPLASMIC (Homo sapiens) |
PF02272(DHHA1) | 3 | SER A 77GLU A 139ASP A 34 | None | 0.90A | 2avdB-5t76A:undetectable | 2avdB-5t76A:24.90 | ||
![]() | 5uyr | BACTERIOPHYTOCHROME (Xanthomonascampestris) |
no annotation | 3 | SER A 496GLU A 328ASP A 333 | None | 0.85A | 2avdB-5uyrA:undetectable | 2avdB-5uyrA:undetectable | ||
![]() | 5vni | PROTEIN TRANSPORTPROTEIN SEC24AVESICLE-TRAFFICKINGPROTEIN SEC22B (Homo sapiens;Mus musculus) |
PF00626(Gelsolin)PF04810(zf-Sec23_Sec24)PF04811(Sec23_trunk)PF04815(Sec23_helical)PF08033(Sec23_BS)PF13774(Longin) | 3 | SER B 561GLU B 582ASP C 128 | None | 0.73A | 2avdB-5vniB:undetectable | 2avdB-5vniB:16.17 | ||
![]() | 5ynl | ARGINASE (Glaciozymaantarctica) |
no annotation | 3 | SER A 241GLU A 288ASP A 194 | None | 0.87A | 2avdB-5ynlA:2.8 | 2avdB-5ynlA:undetectable | ||
![]() | 5ysm | CYTOCHROME P450 (Amycolatopsismediterranei) |
no annotation | 3 | SER A 301GLU A 295ASP A 344 | None | 0.89A | 2avdB-5ysmA:undetectable | 2avdB-5ysmA:undetectable | ||
![]() | 6dft | - (-) |
no annotation | 3 | SER A 220GLU A 174ASP A 205 | None | 0.69A | 2avdB-6dftA:undetectable | 2avdB-6dftA:undetectable | ||
![]() | 6exv | DNA-DIRECTED RNAPOLYMERASE IISUBUNIT RPB2 (Sus scrofa) |
no annotation | 3 | SER B 893GLU B 830ASP B 850 | None | 0.89A | 2avdB-6exvB:undetectable | 2avdB-6exvB:undetectable |