SIMILAR PATTERNS OF AMINO ACIDS FOR 2AOT_B_2PMB401_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)

Filter list by:

	Hit	Macromolecule/ Organism	Pfam	Res.	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	1jqe	HISTAMINE N-METHYLTRANSFERASE (Homo sapiens)	PF13489 (Methyltransf_23)	9	PHE A 22 GLN A 143 TYR A 146 TYR A 147 TRP A 179 TRP A 183 CYH A 196 TYR A 198 PHE A 243	None None QUN A 500 (-3.3A) QUN A 500 ( 3.6A) QUN A 500 (-3.6A) QUN A 500 (-4.9A) QUN A 500 (-3.6A) None QUN A 500 (-4.1A)	0.60A	2aotB-1jqeA: 42.5	2aotB-1jqeA: 99.66
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	1jqe	HISTAMINE N-METHYLTRANSFERASE (Homo sapiens)	PF13489 (Methyltransf_23)	8	PHE A 22 TYR A 146 TYR A 147 TRP A 183 CYH A 196 TYR A 198 PHE A 243 GLU A 246	None QUN A 500 (-3.3A) QUN A 500 ( 3.6A) QUN A 500 (-4.9A) QUN A 500 (-3.6A) None QUN A 500 (-4.1A) QUN A 500 (-3.9A)	0.84A	2aotB-1jqeA: 42.5	2aotB-1jqeA: 99.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4g34	EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 3 (Homo sapiens)	PF00069 (Pkinase)	5	PHE A1020 TYR A1018 PHE A1038 TYR A 989 GLU A1015	None	1.40A	2aotB-4g34A: 0.0	2aotB-4g34A: 19.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5wqs	BETA-AMYLASE (Ipomoea batatas)	no annotation	5	PHE A 264 TYR A 210 CYH A 209 TYR A 190 PHE A 250	None	1.46A	2aotB-5wqsA: 0.0	2aotB-5wqsA: 19.53

[["2AOT_B_2PMB401_1","1jqe","Homo sapiens","HISTAMINE N-METHYLTRANSFERASE","PF13489(Methyltransf_23)",9,"PHE A  22;GLN A 143;TYR A 146;TYR A 147;TRP A 179;TRP A 183;CYH A 196;TYR A 198;PHE A 243","None;None;QUN A 500 (-3.3A);QUN A 500 ( 3.6A);QUN A 500 (-3.6A);QUN A 500 (-4.9A);QUN A 500 (-3.6A);None;QUN A 500 (-4.1A)","0.60A","2aotB-1jqeA:42.5","2aotB-1jqeA:99.66"],["2AOT_B_2PMB401_1","1jqe","Homo sapiens","HISTAMINE N-METHYLTRANSFERASE","PF13489(Methyltransf_23)",8,"PHE A  22;TYR A 146;TYR A 147;TRP A 183;CYH A 196;TYR A 198;PHE A 243;GLU A 246","None;QUN A 500 (-3.3A);QUN A 500 ( 3.6A);QUN A 500 (-4.9A);QUN A 500 (-3.6A);None;QUN A 500 (-4.1A);QUN A 500 (-3.9A)","0.84A","2aotB-1jqeA:42.5","2aotB-1jqeA:99.66"],["2AOT_B_2PMB401_1","4g34","Homo sapiens","EUKARYOTIC TRANSLATION INITIATION FACTOR 2-ALPHA KINASE 3","PF00069(Pkinase)",5,"PHE A1020;TYR A1018;PHE A1038;TYR A 989;GLU A1015","None","1.40A","2aotB-4g34A:0.0","2aotB-4g34A:19.58"],["2AOT_B_2PMB401_1","5wqs","Ipomoea batatas","BETA-AMYLASE","no annotation",5,"PHE A 264;TYR A 210;CYH A 209;TYR A 190;PHE A 250","None","1.46A","2aotB-5wqsA:0.0","2aotB-5wqsA:19.53"]]