SIMILAR PATTERNS OF AMINO ACIDS FOR 1WRL_C_TFPC206

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1ggz CALMODULIN-RELATED
PROTEIN NB-1

(Homo sapiens) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
GLN A  41
GLU A  47
MET A  51
 None
 0.54A 1wrlC-1ggzA:
11.2
1wrlD-1ggzA:
11.2		 1wrlC-1ggzA:
57.30
1wrlD-1ggzA:
57.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1wrk TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES

(Homo sapiens) 		PF13833
(EF-hand_8) 		7 MET A  45
LEU A  48
GLN A  50
GLU A  56
MET A  60
MET A  80
MET A  81
 TFP  A 202 (-3.6A)
TFP  A 202 (-4.1A)
TFP  A 202 (-3.4A)
TFP  A 202 ( 4.6A)
TFP  A 202 ( 4.0A)
TFP  A 202 (-3.5A)
TFP  A 202 ( 3.3A)
 0.37A 1wrlC-1wrkA:
17.3
1wrlD-1wrkA:
17.0		 1wrlC-1wrkA:
100.00
1wrlD-1wrkA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2f2p CALMODULIN FUSED
WITH
CALMODULIN-BINDING
DOMAIN OF
CALCINEURIN

(Bos taurus) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
GLN A  41
MET A  51
MET A  72
 None
 1.13A 1wrlC-2f2pA:
11.3
1wrlD-2f2pA:
11.3		 1wrlC-2f2pA:
61.80
1wrlD-2f2pA:
61.80
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2f2p CALMODULIN FUSED
WITH
CALMODULIN-BINDING
DOMAIN OF
CALCINEURIN

(Bos taurus) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
MET A  51
MET A  71
MET A  72
 None
 0.75A 1wrlC-2f2pA:
11.3
1wrlD-2f2pA:
11.3		 1wrlC-2f2pA:
61.80
1wrlD-2f2pA:
61.80
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2w49 TROPONIN C, SKELETAL
MUSCLE

(Gallus gallus) 		PF13499
(EF-hand_7)
PF13833
(EF-hand_8) 		6 MET 0  45
LEU 0  48
GLN 0  50
GLU 0  56
MET 0  80
MET 0  81
 None
 0.87A 1wrlC-2w490:
13.2
1wrlD-2w490:
13.0		 1wrlC-2w490:
64.77
1wrlD-2w490:
64.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3b32 CALMODULIN

(Rattus
norvegicus) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
GLN A  41
GLU A  47
MET A  51
 None
 0.63A 1wrlC-3b32A:
11.2
1wrlD-3b32A:
11.1		 1wrlC-3b32A:
59.30
1wrlD-3b32A:
59.30
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3b32 CALMODULIN

(Rattus
norvegicus) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
GLN A  41
GLU A  47
MET A  71
 None
 1.33A 1wrlC-3b32A:
11.2
1wrlD-3b32A:
11.1		 1wrlC-3b32A:
59.30
1wrlD-3b32A:
59.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3u0k RCAMP

(Entacmaea
quadricolor) 		PF01353
(GFP)
PF13499
(EF-hand_7) 		5 LEU A 333
MET A 345
MET A 365
MET A 366
GLU A 378
 None
 1.43A 1wrlC-3u0kA:
10.3
1wrlD-3u0kA:
9.9		 1wrlC-3u0kA:
16.53
1wrlD-3u0kA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3u0k RCAMP

(Entacmaea
quadricolor) 		PF01353
(GFP)
PF13499
(EF-hand_7) 		6 MET A 330
GLN A 335
GLU A 341
MET A 345
MET A 365
MET A 366
 None
 1.13A 1wrlC-3u0kA:
10.3
1wrlD-3u0kA:
9.9		 1wrlC-3u0kA:
16.53
1wrlD-3u0kA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3u0k RCAMP

(Entacmaea
quadricolor) 		PF01353
(GFP)
PF13499
(EF-hand_7) 		6 MET A 330
LEU A 333
GLU A 341
MET A 345
MET A 365
MET A 366
 None
 0.99A 1wrlC-3u0kA:
10.3
1wrlD-3u0kA:
9.9		 1wrlC-3u0kA:
16.53
1wrlD-3u0kA:
16.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4i2y RGECO1

(Discosoma sp.;
Gallus gallus;
Rattus
norvegicus) 		PF01353
(GFP)
PF13499
(EF-hand_7) 		5 MET A 339
LEU A 342
GLN A 344
GLU A 350
MET A 354
 None
 1.04A 1wrlC-4i2yA:
10.5
1wrlD-4i2yA:
10.9		 1wrlC-4i2yA:
16.10
1wrlD-4i2yA:
16.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4q57 CALMODULIN

(Homo sapiens) 		PF13499
(EF-hand_7) 		5 MET A  36
LEU A  39
GLN A  41
GLU A  47
MET A  51
 None
 0.49A 1wrlC-4q57A:
10.2
1wrlD-4q57A:
10.3		 1wrlC-4q57A:
55.70
1wrlD-4q57A:
55.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5coc IMMUNOGLOBULIN
G-BINDING PROTEIN
A,CALMODULIN

(Homo sapiens;
Staphylococcus
aureus) 		PF02216
(B)
PF13499
(EF-hand_7) 		5 MET A1037
LEU A1040
GLN A1042
GLU A1048
MET A1052
 None
 0.80A 1wrlC-5cocA:
10.8
1wrlD-5cocA:
10.8		 1wrlC-5cocA:
40.60
1wrlD-5cocA:
40.60
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5h7d ZPA963,CALMODULIN

(Caenorhabditis
elegans;
synthetic
construct) 		PF02216
(B)
PF13499
(EF-hand_7) 		5 MET E 181
GLN E 186
GLU E 192
MET E 196
MET E 216
 None
 0.77A 1wrlC-5h7dE:
8.6
1wrlD-5h7dE:
8.5		 1wrlC-5h7dE:
40.68
1wrlD-5h7dE:
40.68
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5w88 TROPONIN C, TROPONIN
I

(Homo sapiens) 		PF00992
(Troponin)
PF13833
(EF-hand_8) 		6 MET A  45
LEU A  48
GLN A  50
GLU A  56
MET A  60
MET A  81
 9XG  A 201 (-2.4A)
9XG  A 201 ( 4.8A)
None
None
9XG  A 201 (-4.0A)
9XG  A 201 ( 4.6A)
 0.97A 1wrlC-5w88A:
12.0
1wrlD-5w88A:
11.4		 1wrlC-5w88A:
100.00
1wrlD-5w88A:
100.00