SIMILAR PATTERNS OF AMINO ACIDS FOR 1U65_A_CP0A1000_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1b41 ACETYLCHOLINESTERASE

(Homo sapiens) 		PF00135
(COesterase) 		5 TYR A  72
TRP A  86
GLU A 202
TYR A 341
HIS A 447
 None
 0.76A 1u65A-1b41A:
59.5		 1u65A-1b41A:
57.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1b41 ACETYLCHOLINESTERASE

(Homo sapiens) 		PF00135
(COesterase) 		7 TYR A  72
TRP A  86
TYR A 124
GLU A 202
TRP A 286
LEU A 289
HIS A 447
 None
 0.46A 1u65A-1b41A:
59.5		 1u65A-1b41A:
57.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1c2o ACETYLCHOLINESTERASE

(Electrophorus
electricus) 		PF00135
(COesterase) 		8 TYR A  72
TRP A  86
TYR A 124
GLU A 202
TRP A 286
LEU A 289
TYR A 341
HIS A 447
 None
 0.63A 1u65A-1c2oA:
59.4		 1u65A-1c2oA:
58.78
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1gqr ACETYLCHOLINESTERASE

(Tetronarce
californica) 		PF00135
(COesterase) 		9 GLN A  74
TRP A  84
TYR A 121
GLU A 199
TRP A 279
LEU A 282
ASP A 285
TYR A 334
HIS A 440
 None
SAF  A1998 (-3.8A)
None
SAF  A1998 (-3.5A)
None
None
None
None
EMM  A1999 ( 3.8A)
 0.94A 1u65A-1gqrA:
68.0		 1u65A-1gqrA:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1gqr ACETYLCHOLINESTERASE

(Tetronarce
californica) 		PF00135
(COesterase) 		10 TYR A  70
GLN A  74
TRP A  84
TYR A 121
GLU A 199
TRP A 279
LEU A 282
ASP A 285
PHE A 330
TYR A 334
 None
None
SAF  A1998 (-3.8A)
None
SAF  A1998 (-3.5A)
None
None
None
SAF  A1998 (-3.1A)
None
 0.77A 1u65A-1gqrA:
68.0		 1u65A-1gqrA:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qf7 PROTEIN (CATALASE
HPII)

(Escherichia
coli) 		PF00199
(Catalase)
PF06628
(Catalase-rel) 		5 GLN A 246
LEU A 547
ASP A 545
TYR A 242
HIS A 236
 None
 1.34A 1u65A-1qf7A:
0.0		 1u65A-1qf7A:
21.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1qon ACETYLCHOLINESTERASE

(Drosophila
melanogaster) 		PF00135
(COesterase) 		5 TRP A  83
GLU A 237
TRP A 321
TYR A 374
HIS A 480
 I40  A 997 (-3.2A)
I40  A 997 (-4.2A)
None
I40  A 997 ( 3.9A)
SO4  A 593 (-4.1A)
 0.68A 1u65A-1qonA:
56.1		 1u65A-1qonA:
38.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1r3n BETA-ALANINE
SYNTHASE

(Lachancea
kluyveri) 		PF01546
(Peptidase_M20)
PF07687
(M20_dimer) 		5 GLN A 247
GLU A 160
LEU A 233
ASP A 235
HIS A 421
 None
ZN  A 501 (-2.0A)
None
None
ZN  A 501 (-3.2A)
 1.49A 1u65A-1r3nA:
0.0		 1u65A-1r3nA:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1xip NUCLEOPORIN NUP159

(Saccharomyces
cerevisiae) 		PF16755
(NUP214) 		5 GLN A 245
TYR A 279
LEU A 324
ASP A 333
PHE A 275
 None
 1.44A 1u65A-1xipA:
undetectable		 1u65A-1xipA:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ye9 CATALASE HPII

(Escherichia
coli) 		PF00199
(Catalase)
PF06628
(Catalase-rel) 		5 GLN A 246
LEU E 547
ASP E 545
TYR A 242
HIS A 236
 None
 1.45A 1u65A-1ye9A:
undetectable		 1u65A-1ye9A:
17.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2o3e NEUROLYSIN

(Rattus
norvegicus) 		PF01432
(Peptidase_M3) 		5 TYR A 642
GLU A 503
ASP A 402
TYR A 374
HIS A 478
 None
ZN  A 679 (-2.1A)
None
None
ZN  A 679 (-3.3A)
 1.38A 1u65A-2o3eA:
1.5		 1u65A-2o3eA:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4b7g CATALASE

(Corynebacterium
glutamicum) 		PF00199
(Catalase)
PF06628
(Catalase-rel) 		5 GLN A 163
TYR A 495
TRP A 178
ASP A 242
HIS A 189
 None
None
None
None
NDP  A1518 (-3.8A)
 1.27A 1u65A-4b7gA:
undetectable		 1u65A-4b7gA:
22.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kqb PROTEIN H03A11.1

(Caenorhabditis
elegans) 		PF06702
(Fam20C) 		5 TYR A 332
GLU A 468
TRP A 326
ASP A 366
HIS A 465
 None
None
None
MN  A 606 (-4.5A)
None
 1.33A 1u65A-4kqbA:
undetectable		 1u65A-4kqbA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4p56 PUTATIVE
EXTRACELLULAR
SOLUTE-BINDING
PROTEIN

(Bordetella
bronchiseptica) 		PF03480
(DctP) 		5 GLU A  52
LEU A 339
ASP A 112
PHE A  45
TYR A 144
 None
 1.25A 1u65A-4p56A:
0.0		 1u65A-4p56A:
21.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4qww ACETYLCHOLINESTERASE

(Bungarus
fasciatus) 		PF00135
(COesterase) 		7 TRP A  84
TYR A 121
GLU A 199
TRP A 279
LEU A 282
TYR A 334
HIS A 440
 None
 0.71A 1u65A-4qwwA:
63.6		 1u65A-4qwwA:
65.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vlj NUCLEAR DISTRIBUTION
PROTEIN PAC1

(Saccharomyces
cerevisiae) 		PF00400
(WD40) 		5 GLN B 245
GLU B 155
LEU B 207
ASP B 205
HIS B 176
 None
 1.31A 1u65A-5vljB:
undetectable		 1u65A-5vljB:
20.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ydj ACETYLCHOLINESTERASE

(Anopheles
gambiae) 		no annotation 6 TRP A 245
TYR A 282
GLU A 359
TRP A 441
LEU A 444
HIS A 600
 SEB  A 360 ( 4.2A)
None
SEB  A 360 ( 3.3A)
None
SO4  A 816 (-4.0A)
SEB  A 360 ( 4.2A)
 0.84A 1u65A-5ydjA:
62.1		 1u65A-5ydjA:
9.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ydj ACETYLCHOLINESTERASE

(Anopheles
gambiae) 		no annotation 6 TRP A 245
TYR A 282
GLU A 359
TRP A 441
TYR A 493
HIS A 600
 SEB  A 360 ( 4.2A)
None
SEB  A 360 ( 3.3A)
None
None
SEB  A 360 ( 4.2A)
 0.44A 1u65A-5ydjA:
62.1		 1u65A-5ydjA:
9.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6arx ACETYLCHOLINESTERASE

(Anopheles
gambiae) 		no annotation 6 TRP A 245
TYR A 282
GLU A 359
TRP A 441
LEU A 444
HIS A 600
 None
 0.90A 1u65A-6arxA:
58.6		 1u65A-6arxA:
13.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6arx ACETYLCHOLINESTERASE

(Anopheles
gambiae) 		no annotation 6 TRP A 245
TYR A 282
GLU A 359
TRP A 441
TYR A 493
HIS A 600
 None
 0.51A 1u65A-6arxA:
58.6		 1u65A-6arxA:
13.53