SIMILAR PATTERNS OF AMINO ACIDS FOR 1TDR_B_MTXB170_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cz3 DIHYDROFOLATE
REDUCTASE


(Thermotoga
maritima)
PF00186
(DHFR_1)
5 ALA A   8
ARG A  53
LEU A  55
ARG A  58
THR A 121
None
0.96A 1tdrB-1cz3A:
20.0
1tdrB-1cz3A:
29.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cz3 DIHYDROFOLATE
REDUCTASE


(Thermotoga
maritima)
PF00186
(DHFR_1)
6 ALA A   8
ASP A  27
ILE A  51
LEU A  55
ARG A  58
THR A 121
None
0.55A 1tdrB-1cz3A:
20.0
1tdrB-1cz3A:
29.05
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1dr6 DIHYDROFOLATE
REDUCTASE


(Gallus gallus)
PF00186
(DHFR_1)
6 ALA A   9
ILE A  60
LEU A  67
ARG A  70
TYR A 121
THR A 136
HBI  A 198 ( 3.6A)
None
None
None
None
HBI  A 198 ( 4.5A)
0.76A 1tdrB-1dr6A:
20.4
1tdrB-1dr6A:
32.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1e5f METHIONINE
GAMMA-LYASE


(Trichomonas
vaginalis)
PF01053
(Cys_Met_Meta_PP)
5 ILE A 232
ARG A 233
LEU A 229
TYR A 152
THR A 186
None
GOL  A 412 (-4.0A)
None
None
PLP  A 405 (-3.8A)
1.40A 1tdrB-1e5fA:
undetectable
1tdrB-1e5fA:
16.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1j71 ASPARTIC PROTEINASE

(Candida
tropicalis)
PF00026
(Asp)
5 ALA A 213
LEU A 299
ILE A 318
LEU A 320
THR A 211
None
1.37A 1tdrB-1j71A:
undetectable
1tdrB-1j71A:
18.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1juv DIHYDROFOLATE
REDUCTASE


(Escherichia
virus T4)
PF00186
(DHFR_1)
5 ASP A  36
LEU A  37
LYS A  41
LEU A  63
ARG A  66
None
1.12A 1tdrB-1juvA:
17.1
1tdrB-1juvA:
26.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1sny SNIFFER CG10964-PA

(Drosophila
melanogaster)
PF00106
(adh_short)
5 LEU A 177
ILE A 149
LEU A 184
TYR A  68
THR A 114
None
None
None
None
NAP  A 400 ( 4.0A)
1.33A 1tdrB-1snyA:
undetectable
1tdrB-1snyA:
19.70
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1u70 DIHYDROFOLATE
REDUCTASE


(Mus musculus)
PF00186
(DHFR_1)
6 ALA A   9
ILE A  60
LEU A  67
ARG A  70
TYR A 121
THR A 136
NDP  A 188 (-3.6A)
MTX  A 187 ( 4.2A)
MTX  A 187 ( 4.5A)
MTX  A 187 (-3.1A)
None
MTX  A 187 (-4.4A)
0.59A 1tdrB-1u70A:
20.0
1tdrB-1u70A:
32.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1u71 DIHYDROFOLATE
REDUCTASE


(Homo sapiens)
PF00186
(DHFR_1)
6 ALA A   9
ILE A  60
LEU A  67
ARG A  70
TYR A 121
THR A 136
MXA  A 187 (-3.6A)
MXA  A 187 ( 4.7A)
None
None
None
MXA  A 187 (-4.3A)
0.59A 1tdrB-1u71A:
20.2
1tdrB-1u71A:
31.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1xn4 RIBONUCLEASE MAR1

(Leishmania
major)
PF00857
(Isochorismatase)
5 ALA A  14
ILE A 113
LEU A 134
TYR A  54
THR A  13
None
1.37A 1tdrB-1xn4A:
undetectable
1tdrB-1xn4A:
24.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1zdr DIHYDROFOLATE
REDUCTASE


(Geobacillus
stearothermophilus)
PF00186
(DHFR_1)
8 ALA A   7
ASP A  27
LEU A  28
LYS A  32
ILE A  50
LEU A  54
ARG A  57
THR A 115
None
None
SO4  A3486 ( 4.8A)
SO4  A3484 (-3.1A)
SO4  A3486 ( 4.8A)
SO4  A3486 (-4.2A)
SO4  A3484 (-3.3A)
None
0.66A 1tdrB-1zdrA:
24.2
1tdrB-1zdrA:
40.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zrm L-2-HALOACID
DEHALOGENASE


(Pseudomonas sp.
YL)
PF13419
(HAD_2)
5 ALA A 175
LEU A 117
ILE A 171
LEU A 164
THR A  14
None
1.37A 1tdrB-1zrmA:
undetectable
1tdrB-1zrmA:
20.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2blb DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Plasmodium
vivax)
PF00186
(DHFR_1)
6 ALA A  15
ASP A  53
ILE A 121
LEU A 128
TYR A 179
THR A 194
CP7  A1240 (-3.7A)
CP7  A1240 (-3.1A)
MES  A1241 ( 4.1A)
MES  A1241 (-4.5A)
None
CP7  A1240 (-4.1A)
0.76A 1tdrB-2blbA:
19.8
1tdrB-2blbA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2blb DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Plasmodium
vivax)
PF00186
(DHFR_1)
6 ALA A  15
ASP A  53
LEU A 128
ARG A 131
TYR A 179
THR A 194
CP7  A1240 (-3.7A)
CP7  A1240 (-3.1A)
MES  A1241 (-4.5A)
MES  A1241 (-2.7A)
None
CP7  A1240 (-4.1A)
0.35A 1tdrB-2blbA:
19.8
1tdrB-2blbA:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2bri URIDYLATE KINASE

(Pyrococcus
furiosus)
PF00696
(AA_kinase)
5 ALA A 124
ASP A   6
ILE A 223
LEU A 167
THR A 120
None
None
None
None
ANP  A1226 (-4.0A)
1.40A 1tdrB-2briA:
undetectable
1tdrB-2briA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2h2q BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Trypanosoma
cruzi)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
7 ALA A  28
ASP A  48
ILE A  84
LEU A  91
ARG A  94
TYR A 160
THR A 178
NAP  A 523 (-3.7A)
None
None
None
None
None
None
0.71A 1tdrB-2h2qA:
18.8
1tdrB-2h2qA:
18.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2oip CHAIN A, CRYSTAL
STRUCTURE OF DHFR


(Cryptosporidium
hominis)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
8 ALA A  11
ASP A  32
LEU A  33
ILE A  62
LEU A  67
ARG A  70
TYR A 119
THR A 134
MTX  A 605 ( 3.6A)
MTX  A 605 ( 3.0A)
MTX  A 605 ( 4.0A)
MTX  A 605 ( 4.6A)
MTX  A 605 ( 4.4A)
MTX  A 605 ( 3.1A)
None
MTX  A 605 ( 4.2A)
0.66A 1tdrB-2oipA:
20.4
1tdrB-2oipA:
16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2oip CHAIN A, CRYSTAL
STRUCTURE OF DHFR


(Cryptosporidium
hominis)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
5 ALA A  11
ASP A  32
LYS A  38
TYR A 119
THR A 134
MTX  A 605 ( 3.6A)
MTX  A 605 ( 3.0A)
None
None
MTX  A 605 ( 4.2A)
1.27A 1tdrB-2oipA:
20.4
1tdrB-2oipA:
16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2py6 METHYLTRANSFERASE
FKBM


(Methylobacillus
flagellatus)
PF05050
(Methyltransf_21)
5 ASP A 377
LEU A 376
ILE A 166
LEU A 193
TYR A 157
None
1.18A 1tdrB-2py6A:
2.7
1tdrB-2py6A:
17.26
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2qk8 DIHYDROFOLATE
REDUCTASE


(Bacillus
anthracis)
PF00186
(DHFR_1)
9 ALA A   8
LEU A  29
LYS A  33
ILE A  51
ARG A  53
LEU A  55
ARG A  58
TYR A 102
THR A 115
MTX  A 200 ( 3.4A)
MTX  A 200 ( 4.3A)
MTX  A 200 ( 4.1A)
MTX  A 200 ( 4.2A)
MTX  A 200 ( 3.5A)
MTX  A 200 ( 4.1A)
MTX  A 200 ( 2.8A)
None
MTX  A 200 ( 4.4A)
0.64A 1tdrB-2qk8A:
24.6
1tdrB-2qk8A:
40.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2w3w DIHYDROFOLATE
REDUCTASE


(Mycobacterium
avium)
PF00186
(DHFR_1)
6 ALA A  11
ASP A  31
LEU A  32
LEU A  54
TYR A 108
THR A 121
VG9  A1168 ( 3.8A)
VG9  A1168 (-3.0A)
VG9  A1168 (-4.7A)
None
None
VG9  A1168 ( 4.7A)
1.36A 1tdrB-2w3wA:
23.5
1tdrB-2w3wA:
34.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2w3w DIHYDROFOLATE
REDUCTASE


(Mycobacterium
avium)
PF00186
(DHFR_1)
7 ALA A  11
ASP A  31
LEU A  32
LEU A  61
ARG A  64
TYR A 108
THR A 121
VG9  A1168 ( 3.8A)
VG9  A1168 (-3.0A)
VG9  A1168 (-4.7A)
VG9  A1168 ( 4.4A)
VG9  A1168 ( 3.7A)
None
VG9  A1168 ( 4.7A)
0.55A 1tdrB-2w3wA:
23.5
1tdrB-2w3wA:
34.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2w9s DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003


(Staphylococcus
aureus)
PF00186
(DHFR_1)
8 ALA A   7
ASP A  27
LEU A  28
ILE A  50
LEU A  54
ARG A  57
TYR A  98
THR A 111
TOP  A1160 ( 3.6A)
TOP  A1160 (-2.8A)
TOP  A1160 ( 4.6A)
TOP  A1160 (-4.4A)
None
None
None
TOP  A1160 ( 4.5A)
0.47A 1tdrB-2w9sA:
24.4
1tdrB-2w9sA:
38.51
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2w9s DIHYDROFOLATE
REDUCTASE TYPE 1
FROM TN4003


(Staphylococcus
aureus)
PF00186
(DHFR_1)
8 ALA A   7
ASP A  27
LEU A  28
LYS A  32
LEU A  54
ARG A  57
TYR A  98
THR A 111
TOP  A1160 ( 3.6A)
TOP  A1160 (-2.8A)
TOP  A1160 ( 4.6A)
None
None
None
None
TOP  A1160 ( 4.5A)
0.55A 1tdrB-2w9sA:
24.4
1tdrB-2w9sA:
38.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3b2r CGMP-SPECIFIC
3',5'-CYCLIC
PHOSPHODIESTERASE


(Homo sapiens)
PF00233
(PDEase_I)
5 ALA A 572
LEU A 651
ILE A 692
LEU A 655
THR A 571
None
1.42A 1tdrB-3b2rA:
undetectable
1tdrB-3b2rA:
17.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dfr DIHYDROFOLATE
REDUCTASE


(Lactobacillus
casei)
PF00186
(DHFR_1)
6 ALA A   6
ASP A  26
LEU A  27
LEU A  54
ARG A  57
THR A 116
MTX  A 164 (-3.8A)
MTX  A 164 ( 2.9A)
MTX  A 164 ( 4.5A)
MTX  A 164 ( 4.4A)
MTX  A 164 ( 2.9A)
MTX  A 164 ( 4.3A)
0.56A 1tdrB-3dfrA:
23.0
1tdrB-3dfrA:
29.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dg8 BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Plasmodium
falciparum)
PF00186
(DHFR_1)
7 ALA A  16
ASP A  54
ILE A 112
LEU A 119
ARG A 122
TYR A 170
THR A 185
RJ6  A 609 (-3.7A)
RJ6  A 609 (-3.0A)
RJ6  A 609 (-4.8A)
RJ6  A 609 (-4.4A)
None
NDP  A 610 ( 4.9A)
RJ6  A 609 ( 4.5A)
0.72A 1tdrB-3dg8A:
19.7
1tdrB-3dg8A:
23.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3e2s PROLINE
DEHYDROGENASE


(Escherichia
coli)
PF01619
(Pro_dh)
PF14850
(Pro_dh-DNA_bdg)
5 ALA A 541
LEU A 269
ILE A 365
ARG A 318
THR A 261
None
1.40A 1tdrB-3e2sA:
undetectable
1tdrB-3e2sA:
15.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3f0h AMINOTRANSFERASE

([Eubacterium]
rectale)
PF00266
(Aminotran_5)
5 ALA A 299
LEU A 351
ILE A 316
LEU A 344
THR A 298
None
1.29A 1tdrB-3f0hA:
2.4
1tdrB-3f0hA:
17.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3hi8 PROLIFERATING CELL
NUCLEAR ANTIGEN PCNA


(Haloferax
volcanii)
PF00705
(PCNA_N)
PF02747
(PCNA_C)
5 ALA A  14
LEU A  34
ILE A  66
LEU A  90
THR A  10
None
1.29A 1tdrB-3hi8A:
undetectable
1tdrB-3hi8A:
24.21
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3i8a DIHYDROFOLATE
REDUCTASE


(Staphylococcus
aureus)
PF00186
(DHFR_1)
9 ALA X   7
ASP X  27
LEU X  28
LYS X  32
ILE X  50
LEU X  54
ARG X  57
TYR X  98
THR X 111
N22  X 219 ( 3.6A)
N22  X 219 (-2.8A)
N22  X 219 (-4.4A)
None
N22  X 219 (-4.6A)
None
None
None
N22  X 219 (-4.4A)
0.65A 1tdrB-3i8aX:
24.6
1tdrB-3i8aX:
37.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ia4 DIHYDROFOLATE
REDUCTASE


(Moritella
profunda)
PF00186
(DHFR_1)
9 ALA A   8
LEU A  29
LYS A  33
ILE A  51
ARG A  53
LEU A  55
ARG A  58
TYR A 102
THR A 115
MTX  A 164 ( 3.7A)
MTX  A 164 (-4.0A)
MTX  A 164 (-3.2A)
MTX  A 164 (-4.1A)
MTX  A 164 (-3.8A)
MTX  A 164 ( 4.4A)
MTX  A 164 (-2.9A)
None
MTX  A 164 (-4.3A)
0.64A 1tdrB-3ia4A:
26.7
1tdrB-3ia4A:
55.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ian CHITINASE

(Lactococcus
lactis)
PF00704
(Glyco_hydro_18)
5 ALA A 198
ASP A 158
LEU A 157
ILE A 131
TYR A 203
EDO  A 361 ( 4.7A)
None
None
None
None
1.50A 1tdrB-3ianA:
undetectable
1tdrB-3ianA:
16.26
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ix9 DIHYDROFOLATE
REDUCTASE


(Streptococcus
pneumoniae)
PF00186
(DHFR_1)
6 ALA A  10
LEU A  31
LYS A  35
ARG A  56
LEU A  58
THR A 119
MTX  A 200 (-3.8A)
MTX  A 200 ( 4.1A)
MTX  A 200 (-4.1A)
None
MTX  A 200 ( 4.0A)
MTX  A 200 ( 4.5A)
0.97A 1tdrB-3ix9A:
23.7
1tdrB-3ix9A:
35.26
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ix9 DIHYDROFOLATE
REDUCTASE


(Streptococcus
pneumoniae)
PF00186
(DHFR_1)
6 ALA A  10
LEU A  31
LYS A  35
LEU A  58
ARG A  61
THR A 119
MTX  A 200 (-3.8A)
MTX  A 200 ( 4.1A)
MTX  A 200 (-4.1A)
MTX  A 200 ( 4.0A)
MTX  A 200 (-2.9A)
MTX  A 200 ( 4.5A)
0.68A 1tdrB-3ix9A:
23.7
1tdrB-3ix9A:
35.26
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jr1 PUTATIVE
FRUCTOSAMINE-3-KINAS
E


(Histophilus
somni)
PF03881
(Fructosamin_kin)
5 ALA A 213
LEU A  66
ILE A 111
TYR A 261
THR A 129
None
1.37A 1tdrB-3jr1A:
undetectable
1tdrB-3jr1A:
16.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kjr DIHYDROFOLATE
REDUCTASE/THYMIDYLAT
E SYNTHASE


(Babesia bovis)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
6 ALA A  16
ASP A  37
ILE A  73
LEU A  80
TYR A 129
THR A 144
NAP  A 512 (-3.7A)
None
None
None
None
None
0.78A 1tdrB-3kjrA:
20.5
1tdrB-3kjrA:
16.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3kjr DIHYDROFOLATE
REDUCTASE/THYMIDYLAT
E SYNTHASE


(Babesia bovis)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
6 ALA A  16
ASP A  37
LEU A  80
ARG A  83
TYR A 129
THR A 144
NAP  A 512 (-3.7A)
None
None
None
None
None
0.39A 1tdrB-3kjrA:
20.5
1tdrB-3kjrA:
16.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3n3w RIBONUCLEASE III

(Campylobacter
jejuni)
PF14622
(Ribonucleas_3_3)
5 ALA A  24
LEU A   7
ILE A 134
ARG A 137
LEU A 138
None
1.29A 1tdrB-3n3wA:
undetectable
1tdrB-3n3wA:
22.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ox4 ALCOHOL
DEHYDROGENASE 2


(Zymomonas
mobilis)
PF00465
(Fe-ADH)
5 ALA A  34
LEU A  26
LYS A  24
ILE A 136
LEU A  19
None
1.48A 1tdrB-3ox4A:
undetectable
1tdrB-3ox4A:
17.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rg9 BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Trypanosoma
brucei)
PF00186
(DHFR_1)
5 ALA A  34
ASP A  54
LEU A  90
TYR A 166
THR A 184
WRA  A 602 (-3.9A)
WRA  A 602 (-2.9A)
WRA  A 602 (-4.8A)
None
WRA  A 602 (-4.2A)
1.03A 1tdrB-3rg9A:
18.9
1tdrB-3rg9A:
26.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3rg9 BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Trypanosoma
brucei)
PF00186
(DHFR_1)
6 ALA A  34
ASP A  54
LEU A  97
ARG A 100
TYR A 166
THR A 184
WRA  A 602 (-3.9A)
WRA  A 602 (-2.9A)
None
None
None
WRA  A 602 (-4.2A)
0.45A 1tdrB-3rg9A:
18.9
1tdrB-3rg9A:
26.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3tq9 DIHYDROFOLATE
REDUCTASE


(Coxiella
burnetii)
PF00186
(DHFR_1)
8 ALA A   8
ASP A  28
LEU A  29
LYS A  33
ILE A  51
LEU A  55
ARG A  58
THR A 115
MTX  A2001 ( 3.4A)
MTX  A2001 (-2.7A)
MTX  A2001 (-3.9A)
None
MTX  A2001 (-4.3A)
MTX  A2001 ( 4.5A)
MTX  A2001 (-2.8A)
MTX  A2001 (-4.3A)
0.41A 1tdrB-3tq9A:
24.4
1tdrB-3tq9A:
43.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3um6 BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Plasmodium
falciparum)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
5 ASP A  54
LEU A 119
ARG A 122
TYR A 170
THR A 185
1CY  A 609 (-2.9A)
None
None
None
1CY  A 609 (-4.3A)
0.43A 1tdrB-3um6A:
19.8
1tdrB-3um6A:
13.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3umb DEHALOGENASE-LIKE
HYDROLASE


(Ralstonia
solanacearum)
PF00702
(Hydrolase)
5 ALA A  11
ASP A  10
ARG A  49
TYR A  95
THR A  14
None
1.40A 1tdrB-3umbA:
undetectable
1tdrB-3umbA:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ux8 EXCINUCLEASE ABC, A
SUBUNIT


(Geobacillus sp.
Y412MC52)
PF00005
(ABC_tran)
5 ASP A 895
ILE A 598
ARG A 940
LEU A 936
THR A 631
None
1.47A 1tdrB-3ux8A:
undetectable
1tdrB-3ux8A:
14.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vax PUTATIVE
UNCHARACTERIZED
PROTEIN DNDA


(Streptomyces
lividans)
PF00266
(Aminotran_5)
5 ALA A 101
LEU A  78
ILE A  92
LEU A 142
THR A  70
PLP  A 400 ( 4.5A)
None
None
None
PLP  A 400 (-3.6A)
1.35A 1tdrB-3vaxA:
undetectable
1tdrB-3vaxA:
16.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vco DIHYDROFOLATE
REDUCTASE


(Schistosoma
mansoni)
PF00186
(DHFR_1)
7 ALA A   8
ASP A  28
ILE A  57
LEU A  64
ARG A  67
TYR A 117
THR A 133
None
0.68A 1tdrB-3vcoA:
19.0
1tdrB-3vcoA:
29.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vco DIHYDROFOLATE
REDUCTASE


(Schistosoma
mansoni)
PF00186
(DHFR_1)
7 ALA A   8
ASP A  28
LYS A  33
ILE A  57
LEU A  64
TYR A 117
THR A 133
None
0.97A 1tdrB-3vcoA:
19.0
1tdrB-3vcoA:
29.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4anj UNCONVENTIONAL
MYOSIN-VI, GREEN
FLUORESCENT PROTEIN


(Aequorea
victoria;
Sus scrofa)
PF00063
(Myosin_head)
PF01353
(GFP)
5 ALA A1110
ILE A1014
LEU A1042
TYR A1092
THR A1108
None
1.33A 1tdrB-4anjA:
undetectable
1tdrB-4anjA:
9.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4f0t C-PHYCOCYANIN ALPHA
CHAIN
C-PHYCOCYANIN BETA
CHAIN


(Synechocystis
sp. PCC 6803)
PF00502
(Phycobilisome)
5 ALA A 101
ASP B   3
LEU A   5
TYR A 165
THR B   6
None
1.35A 1tdrB-4f0tA:
undetectable
1tdrB-4f0tA:
21.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4fdd RNA-BINDING PROTEIN
FUS
TRANSPORTIN-1


(Homo sapiens)
PF03810
(IBN_N)
PF13513
(HEAT_EZ)
no annotation
5 LEU A 402
ILE A 301
LEU A 394
TYR B 526
THR A 461
None
1.40A 1tdrB-4fddA:
undetectable
1tdrB-4fddA:
10.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4g8z DIHYDROFOLATE
REDUCTASE


(Pneumocystis
jirovecii)
PF00186
(DHFR_1)
6 ALA X  12
ILE X  65
LEU X  72
ARG X  75
TYR X 129
THR X 144
NDP  X 302 ( 3.8A)
TOP  X 301 ( 4.3A)
None
None
None
TOP  X 301 (-4.5A)
0.74A 1tdrB-4g8zX:
19.4
1tdrB-4g8zX:
30.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gve NUCLEOPROTEIN

(Tacaribe
mammarenavirus)
PF17290
(Arena_ncap_C)
5 ALA A 532
LEU A 399
ILE A 447
ARG A 473
LEU A 468
None
1.38A 1tdrB-4gveA:
undetectable
1tdrB-4gveA:
22.77
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4h96 DIHYDROFOLATE
REDUCTASE


(Candida
albicans)
PF00186
(DHFR_1)
7 ALA A  11
LYS A  37
ILE A  62
LEU A  69
ARG A  72
TYR A 118
THR A 133
14Q  A 202 ( 3.7A)
None
14Q  A 202 ( 4.8A)
None
None
None
14Q  A 202 ( 4.6A)
0.99A 1tdrB-4h96A:
17.4
1tdrB-4h96A:
32.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4h98 DIHYDROFOLATE
REDUCTASE


([Candida]
glabrata)
PF00186
(DHFR_1)
6 ALA A  11
ILE A  62
LEU A  69
ARG A  72
TYR A 127
THR A 140
14Q  A 302 ( 3.4A)
14Q  A 302 (-4.2A)
None
None
None
14Q  A 302 (-4.2A)
0.66A 1tdrB-4h98A:
18.1
1tdrB-4h98A:
27.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4keg MALTOSE-BINDING
PERIPLASMIC/PALATE
LUNG AND NASAL
EPITHELIUM CLONE
FUSION PROTEIN


(Escherichia
coli;
Homo sapiens)
PF01273
(LBP_BPI_CETP)
PF13416
(SBP_bac_8)
5 ALA A1161
LEU A1120
ILE A1242
LEU A1246
THR A1160
None
1.46A 1tdrB-4kegA:
undetectable
1tdrB-4kegA:
13.53
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4m2x DIHYDROFOLATE
REDUCTASE


(Mycobacterium
tuberculosis)
PF00186
(DHFR_1)
5 ALA A   7
ASP A  27
LEU A  50
TYR A 100
THR A 113
TMQ  A 202 ( 3.5A)
TMQ  A 202 ( 2.7A)
None
None
TMQ  A 202 (-4.2A)
1.11A 1tdrB-4m2xA:
22.1
1tdrB-4m2xA:
35.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4m2x DIHYDROFOLATE
REDUCTASE


(Mycobacterium
tuberculosis)
PF00186
(DHFR_1)
6 ALA A   7
ASP A  27
LEU A  57
ARG A  60
TYR A 100
THR A 113
TMQ  A 202 ( 3.5A)
TMQ  A 202 ( 2.7A)
None
None
None
TMQ  A 202 (-4.2A)
0.41A 1tdrB-4m2xA:
22.1
1tdrB-4m2xA:
35.50
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4m7v DIHYDROFOLATE
REDUCTASE


(Enterococcus
faecalis)
PF00186
(DHFR_1)
6 ALA A   7
ASP A  27
LEU A  28
LEU A  55
ARG A  58
THR A 116
RAR  A 200 ( 3.6A)
RAR  A 200 (-2.6A)
RAR  A 200 (-3.8A)
RAR  A 200 (-4.2A)
RAR  A 200 ( 3.2A)
RAR  A 200 (-4.4A)
0.66A 1tdrB-4m7vA:
23.2
1tdrB-4m7vA:
37.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ndk E23P-YFP, GFP-LIKE
FLUORESCENT
CHROMOPROTEIN FP506,
RELATED, CHIMERIC
CONSTRUCT,


(Aequorea
victoria;
Eimeria
acervulina)
PF00046
(Homeobox)
PF01353
(GFP)
5 ALA A 163
ILE A  67
LEU A  95
TYR A 145
THR A 161
None
1.32A 1tdrB-4ndkA:
undetectable
1tdrB-4ndkA:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4o8a BIFUNCTIONAL PROTEIN
PUTA


(Escherichia
coli)
PF01619
(Pro_dh)
PF14850
(Pro_dh-DNA_bdg)
5 ALA A 541
LEU A 269
ILE A 365
ARG A 318
THR A 261
None
1.41A 1tdrB-4o8aA:
undetectable
1tdrB-4o8aA:
13.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4oby ARGININE--TRNA
LIGASE


(Escherichia
coli)
PF00750
(tRNA-synt_1d)
PF03485
(Arg_tRNA_synt_N)
PF05746
(DALR_1)
5 ALA A  59
LEU A  66
LYS A  10
ILE A  85
LEU A   7
None
1.46A 1tdrB-4obyA:
undetectable
1tdrB-4obyA:
15.14
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4p68 DIHYDROFOLATE
REDUCTASE


(Escherichia
coli)
PF00186
(DHFR_1)
7 ALA A   7
ASP A  27
LYS A  32
ILE A  50
ARG A  57
TYR A 100
THR A 113
MTX  A 201 ( 4.0A)
MTX  A 201 (-3.0A)
MTX  A 201 ( 3.9A)
MTX  A 201 (-4.7A)
MTX  A 201 (-3.0A)
None
MTX  A 201 ( 4.5A)
0.51A 1tdrB-4p68A:
28.2
1tdrB-4p68A:
96.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4p7h MYOSIN-7,GREEN
FLUORESCENT PROTEIN


(Aequorea
victoria;
Homo sapiens)
PF00063
(Myosin_head)
PF01353
(GFP)
PF02736
(Myosin_N)
5 ALA A 897
ILE A 801
LEU A 829
TYR A 879
THR A 895
None
1.26A 1tdrB-4p7hA:
undetectable
1tdrB-4p7hA:
9.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4p7h MYOSIN-7,GREEN
FLUORESCENT PROTEIN


(Aequorea
victoria;
Homo sapiens)
PF00063
(Myosin_head)
PF01353
(GFP)
PF02736
(Myosin_N)
5 ALA A 897
ILE A 801
LEU A 831
TYR A 879
THR A 895
None
1.48A 1tdrB-4p7hA:
undetectable
1tdrB-4p7hA:
9.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4wed ABC TRANSPORTER,
PERIPLASMIC
SOLUTE-BINDING
PROTEIN


(Sinorhizobium
meliloti)
PF00496
(SBP_bac_5)
5 ALA A 328
LEU A 433
ILE A 488
LEU A 449
TYR A 493
None
1.37A 1tdrB-4wedA:
undetectable
1tdrB-4wedA:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xci THERMOSOME SUBUNIT
ALPHA


(Sulfolobus
solfataricus)
PF00118
(Cpn60_TCP1)
5 ALA A  62
ASP A  86
LEU A 202
ARG A 404
THR A  93
None
1.37A 1tdrB-4xciA:
undetectable
1tdrB-4xciA:
16.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4yh2 GLUTATHIONE S
TRANSFERASE E6


(Drosophila
melanogaster)
PF13417
(GST_N_3)
PF14497
(GST_C_3)
5 ALA A 169
LEU A 192
LYS A 191
ILE A 152
TYR A 139
None
1.46A 1tdrB-4yh2A:
undetectable
1tdrB-4yh2A:
18.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4z17 ENOLASE

(Chloroflexus
aurantiacus)
PF00113
(Enolase_C)
PF03952
(Enolase_N)
5 ASP A  92
LEU A  95
ILE A   5
TYR A 134
THR A 346
None
1.32A 1tdrB-4z17A:
undetectable
1tdrB-4z17A:
16.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5chc DMSO REDUCTASE
FAMILY TYPE II
ENZYME,
MOLYBDOPTERIN
SUBUNIT


(Azospira oryzae)
PF00384
(Molybdopterin)
PF01568
(Molydop_binding)
5 ALA A 411
ILE A 403
LEU A 253
TYR A 196
THR A 444
None
1.41A 1tdrB-5chcA:
undetectable
1tdrB-5chcA:
10.87
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dxv RETHREADED DHFR

(synthetic
construct)
PF00186
(DHFR_1)
6 ALA A   7
ILE A  67
LEU A  71
ARG A  74
TYR A 117
THR A 130
NAP  A 201 (-3.7A)
PEG  A 202 ( 4.9A)
None
None
None
CME  A 140 ( 4.5A)
0.58A 1tdrB-5dxvA:
16.5
1tdrB-5dxvA:
69.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5dxv RETHREADED DHFR

(synthetic
construct)
PF00186
(DHFR_1)
6 LEU A  45
ILE A  67
LEU A  71
ARG A  74
TYR A 117
THR A 130
PEG  A 202 (-4.2A)
PEG  A 202 ( 4.9A)
None
None
None
CME  A 140 ( 4.5A)
0.79A 1tdrB-5dxvA:
16.5
1tdrB-5dxvA:
69.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5fda DIHYDROFOLATE
REDUCTASE


(Yersinia pestis)
PF00186
(DHFR_1)
5 ALA A   8
ILE A  51
LEU A  55
TYR A 101
THR A 114
None
0.59A 1tdrB-5fdaA:
19.5
1tdrB-5fdaA:
79.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hx9 BETA-LACTAMASE

(Burkholderia
vietnamiensis)
PF13354
(Beta-lactamase2)
5 ILE A  80
ARG A  83
LEU A  90
ARG A  93
THR A 109
None
1.37A 1tdrB-5hx9A:
undetectable
1tdrB-5hx9A:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ihv BETA-LACTAMASE

(Burkholderia
ambifaria)
PF13354
(Beta-lactamase2)
5 ILE A  57
ARG A  60
LEU A  67
ARG A  70
THR A  86
None
1.37A 1tdrB-5ihvA:
undetectable
1tdrB-5ihvA:
20.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jay 8-AMINO-7-OXONONANOA
TE SYNTHASE


(Paraburkholderia
xenovorans)
PF00155
(Aminotran_1_2)
5 ALA A 223
ASP A 209
ILE A 289
LEU A  50
THR A 180
None
1.47A 1tdrB-5jayA:
undetectable
1tdrB-5jayA:
15.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mj7 UNCHARACTERIZED
PROTEIN


(Caenorhabditis
elegans)
PF01156
(IU_nuc_hydro)
5 ALA A 235
LEU A 228
ARG A  61
LEU A  26
THR A 236
None
1.25A 1tdrB-5mj7A:
undetectable
1tdrB-5mj7A:
17.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ook PHYCOCYANIN, ALPHA
SUBUNIT
PHYCOCYANIN, BETA
SUBUNIT


(Acaryochloris
marina)
no annotation 5 ALA A 101
ASP B   3
LEU A   5
TYR A 165
THR B   6
None
None
None
PEG  A 204 (-4.5A)
None
1.33A 1tdrB-5ookA:
undetectable
1tdrB-5ookA:
19.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5t0l BIFUNCTIONAL
DIHYDROFOLATE
REDUCTASE-THYMIDYLAT
E SYNTHASE


(Toxoplasma
gondii)
PF00186
(DHFR_1)
PF00303
(Thymidylat_synt)
6 ALA A  10
ASP A  31
LEU A  94
ARG A  97
TYR A 157
THR A 172
73X  A 704 (-4.0A)
73X  A 704 (-2.8A)
None
None
None
73X  A 704 (-4.2A)
0.33A 1tdrB-5t0lA:
20.7
1tdrB-5t0lA:
13.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6c4m YERSINOPINE
DEHYDROGENASE


(Yersinia pestis)
no annotation 5 LEU C  19
ILE C 118
ARG C  89
LEU C 212
THR C 154
None
1.49A 1tdrB-6c4mC:
undetectable
1tdrB-6c4mC:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cxm DIHYDROFOLATE
REDUCTASE


(Mycolicibacterium
smegmatis)
no annotation 7 ALA A   8
ASP A  28
LEU A  29
LEU A  58
ARG A  61
TYR A  98
THR A 111
NAP  A 201 (-3.9A)
MMV  A 202 (-2.9A)
MMV  A 202 (-4.7A)
MMV  A 202 (-4.2A)
MMV  A 202 (-2.8A)
None
MMV  A 202 (-4.4A)
0.71A 1tdrB-6cxmA:
20.9
1tdrB-6cxmA:
30.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cxm DIHYDROFOLATE
REDUCTASE


(Mycolicibacterium
smegmatis)
no annotation 7 ALA A   8
ASP A  28
LYS A  33
LEU A  58
ARG A  61
TYR A  98
THR A 111
NAP  A 201 (-3.9A)
MMV  A 202 (-2.9A)
MMV  A 202 ( 4.6A)
MMV  A 202 (-4.2A)
MMV  A 202 (-2.8A)
None
MMV  A 202 (-4.4A)
0.49A 1tdrB-6cxmA:
20.9
1tdrB-6cxmA:
30.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6e4e -

(-)
no annotation 7 ALA A   7
ASP A  27
LEU A  28
ILE A  50
LEU A  54
ARG A  57
THR A 111
MMV  A 202 ( 3.5A)
MMV  A 202 (-2.9A)
MMV  A 202 (-4.2A)
MMV  A 202 ( 4.9A)
None
None
MMV  A 202 (-4.3A)
0.51A 1tdrB-6e4eA:
24.5
1tdrB-6e4eA:
undetectable