SIMILAR PATTERNS OF AMINO ACIDS FOR 1SKX_A_RFPA1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cby DELTA-ENDOTOXIN CYTB

(Bacillus
thuringiensis) 		PF01338
(Bac_thur_toxin) 		5 VAL A 193
LEU A 189
GLN A 149
TRP A 157
PHE A 173
 None
 1.46A 1skxA-1cbyA:
0.0		 1skxA-1cbyA:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1sfj 3-DEHYDROQUINATE
DEHYDRATASE

(Staphylococcus
aureus) 		PF01487
(DHquinase_I) 		5 LEU A  34
GLN A  22
ARG A  27
ILE A  31
PHE A  63
 None
 1.46A 1skxA-1sfjA:
undetectable		 1skxA-1sfjA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1x9s DNA POLYMERASE

(Escherichia
virus T7) 		PF00476
(DNA_pol_A) 		5 VAL A   3
LEU A 186
SER A  95
HIS A 218
PHE A 192
 None
 1.44A 1skxA-1x9sA:
0.0		 1skxA-1x9sA:
17.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yfj DNA ADENINE
METHYLASE

(Escherichia
virus T4) 		PF02086
(MethyltransfD12) 		5 VAL A  70
LEU A 103
PHE A 152
CYH A 147
ILE A 115
 None
 1.46A 1skxA-1yfjA:
0.0		 1skxA-1yfjA:
20.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1z6g GUANYLATE KINASE

(Plasmodium
falciparum) 		PF00625
(Guanylate_kin) 		5 VAL A 107
LEU A  99
SER A  37
ILE A  21
PHE A  34
 None
 1.33A 1skxA-1z6gA:
0.0		 1skxA-1z6gA:
23.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2e9q 11S GLOBULIN SUBUNIT
BETA

(Cucurbita
maxima) 		PF00190
(Cupin_1) 		5 VAL A 371
MET A 347
SER A 345
HIS A 338
ILE A 306
 None
None
None
CL  A2001 (-4.4A)
None
 1.44A 1skxA-2e9qA:
0.0		 1skxA-2e9qA:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2eqy JUMONJI, AT RICH
INTERACTIVE DOMAIN
1B

(Mus musculus) 		PF01388
(ARID) 		5 LEU A 130
PHE A 143
CYH A 147
ARG A 177
ILE A 178
 None
 1.31A 1skxA-2eqyA:
0.0		 1skxA-2eqyA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2eqy JUMONJI, AT RICH
INTERACTIVE DOMAIN
1B

(Mus musculus) 		PF01388
(ARID) 		5 VAL A 123
LEU A 130
PHE A 143
CYH A 147
ARG A 177
 None
 1.47A 1skxA-2eqyA:
0.0		 1skxA-2eqyA:
20.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3alf CHITINASE, CLASS V

(Nicotiana
tabacum) 		PF00704
(Glyco_hydro_18) 		5 VAL A   3
LEU A  27
SER A  70
PHE A  31
ILE A  19
 None
None
None
EDO  A 357 (-4.8A)
None
 1.47A 1skxA-3alfA:
0.0		 1skxA-3alfA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gc6 ECTO-NAD+
GLYCOHYDROLASE (CD38
MOLECULE)

(Bos taurus) 		PF02267
(Rib_hydrolayse) 		5 VAL A 196
LEU A 252
ARG A 259
ILE A 255
PHE A 208
 None
 1.50A 1skxA-3gc6A:
undetectable		 1skxA-3gc6A:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gg0 KLEBSIELLA
PNEUMONIAE BLRP1

(Klebsiella
pneumoniae) 		PF00563
(EAL)
PF04940
(BLUF) 		5 VAL A  24
LEU A  41
SER A   9
ARG A  98
PHE A 132
 None
None
FMN  A 504 ( 4.7A)
None
None
 1.40A 1skxA-3gg0A:
undetectable		 1skxA-3gg0A:
21.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gzy BIPHENYL DIOXYGENASE
SUBUNIT ALPHA

(Comamonas
testosteroni) 		PF00355
(Rieske)
PF00848
(Ring_hydroxyl_A) 		5 VAL A  95
TRP A 176
HIS A 341
ILE A 211
PHE A 353
 None
 1.48A 1skxA-3gzyA:
undetectable		 1skxA-3gzyA:
20.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3h1v GLUCOKINASE

(Homo sapiens) 		PF00349
(Hexokinase_1)
PF03727
(Hexokinase_2) 		5 VAL X 154
LEU X  79
SER X 445
ILE X 126
PHE X  84
 None
 1.32A 1skxA-3h1vX:
undetectable		 1skxA-3h1vX:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lx6 CYTOSINE-SPECIFIC
METHYLTRANSFERASE

(Shigella
flexneri) 		PF00145
(DNA_methylase) 		5 LEU A 172
PHE A 137
HIS A 128
ARG A 101
PHE A  89
 None
 1.30A 1skxA-3lx6A:
undetectable		 1skxA-3lx6A:
21.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3me5 CYTOSINE-SPECIFIC
METHYLTRANSFERASE

(Shigella
flexneri) 		PF00145
(DNA_methylase) 		5 LEU A 172
PHE A 137
HIS A 128
ARG A 101
PHE A  89
 None
 1.37A 1skxA-3me5A:
undetectable		 1skxA-3me5A:
19.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3mi6 ALPHA-GALACTOSIDASE

(Lactobacillus
brevis) 		PF02065
(Melibiase)
PF16874
(Glyco_hydro_36C)
PF16875
(Glyco_hydro_36N) 		5 LEU A 206
SER A 564
GLN A 310
ILE A 194
PHE A 196
 None
 1.23A 1skxA-3mi6A:
undetectable		 1skxA-3mi6A:
19.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qki GLUCOSE-6-PHOSPHATE
ISOMERASE

(Plasmodium
falciparum) 		PF00342
(PGI) 		5 SER A 378
CYH A 398
GLN A 399
ILE A 428
PHE A 370
 None
 1.41A 1skxA-3qkiA:
undetectable		 1skxA-3qkiA:
20.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3s6x OUTER CAPSID PROTEIN
SIGMA-1

(Mammalian
orthoreovirus) 		PF01664
(Reo_sigma1) 		5 VAL A 430
LEU A 426
TRP A 333
ILE A 350
PHE A 370
 None
 1.47A 1skxA-3s6xA:
undetectable		 1skxA-3s6xA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3u9j F-BOX/LRR-REPEAT
PROTEIN 5

(Homo sapiens) 		PF01814
(Hemerythrin) 		5 LEU A 138
MET A 137
SER A  73
ILE A 150
PHE A 142
 None
 1.48A 1skxA-3u9jA:
undetectable		 1skxA-3u9jA:
19.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wsb FARNESYLTRANSFERASE,
PUTATIVE

(Trypanosoma
cruzi) 		PF00494
(SQS_PSY) 		5 LEU A  67
PHE A 282
GLN A 287
ILE A 138
PHE A  63
 RWZ  A 502 ( 4.4A)
None
None
None
RWZ  A 502 (-3.8A)
 1.24A 1skxA-3wsbA:
2.0		 1skxA-3wsbA:
23.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4a35 MITOCHONDRIAL
ENOLASE SUPERFAMILY
MEMBER 1

(Homo sapiens) 		PF02746
(MR_MLE_N)
PF13378
(MR_MLE_C) 		5 VAL A 227
LEU A 298
CYH A 357
GLN A 330
ILE A 294
 None
 1.42A 1skxA-4a35A:
undetectable		 1skxA-4a35A:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4boc DNA-DIRECTED RNA
POLYMERASE,
MITOCHONDRIAL

(Homo sapiens) 		PF00940
(RNA_pol)
PF14700
(RPOL_N) 		5 VAL A 479
LEU A 578
PHE A 229
CYH A 233
GLN A 238
 None
 1.17A 1skxA-4bocA:
undetectable		 1skxA-4bocA:
15.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4nsd CALCIUM UPTAKE
PROTEIN 1,
MITOCHONDRIAL

(Homo sapiens) 		PF13202
(EF-hand_5)
PF13833
(EF-hand_8) 		5 VAL A 337
LEU A 371
PHE A 417
ILE A 374
PHE A 370
 None
 1.41A 1skxA-4nsdA:
undetectable		 1skxA-4nsdA:
23.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4r20 CYTOCHROME P450
FAMILY 17
POLYPEPTIDE 2

(Danio rerio) 		PF00067
(p450) 		5 VAL A 439
PHE A 417
CYH A 358
HIS A 400
ILE A  86
 None
 1.22A 1skxA-4r20A:
undetectable		 1skxA-4r20A:
20.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4v2d FIBRONECTIN LEUCINE
RICH TRANSMEMBRANE
PROTEIN 2

(Homo sapiens) 		PF01463
(LRRCT)
PF13855
(LRR_8) 		5 VAL A 111
LEU A 129
GLN A 117
ILE A 124
PHE A 155
 None
 1.48A 1skxA-4v2dA:
undetectable		 1skxA-4v2dA:
24.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5dac PUTATIVE
UNCHARACTERIZED
PROTEIN,PUTATIVE
UNCHARACTERIZED
PROTEIN

(Chaetomium
thermophilum) 		PF13476
(AAA_23) 		5 VAL A1192
LEU A1223
HIS A1141
ILE A 179
PHE A1227
 None
 1.28A 1skxA-5dacA:
undetectable		 1skxA-5dacA:
21.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5jp9 CMP
5-HYDROXYMETHYLASE

(Streptomyces
rimofaciens) 		PF00303
(Thymidylat_synt) 		5 VAL A 254
SER A 189
PHE A 190
ILE A  82
PHE A  64
 None
 1.44A 1skxA-5jp9A:
undetectable		 1skxA-5jp9A:
21.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mhr VIRAL ATTACHMENT
PROTEIN SIGMA 1

(Reovirus sp.) 		PF01664
(Reo_sigma1) 		5 VAL A 430
LEU A 426
TRP A 333
ILE A 350
PHE A 370
 None
 1.50A 1skxA-5mhrA:
undetectable		 1skxA-5mhrA:
22.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5t9g GLYCOSIDE HYDROLASE

(Bacteroides
uniformis) 		PF00703
(Glyco_hydro_2)
PF02836
(Glyco_hydro_2_C)
PF02837
(Glyco_hydro_2_N)
PF16355
(DUF4982) 		5 LEU A 308
PHE A 573
ARG A 503
ILE A 298
PHE A 306
 None
 1.48A 1skxA-5t9gA:
undetectable		 1skxA-5t9gA:
17.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6dk2 -

(-) 		no annotation 5 LEU A 293
PHE A 273
HIS A 489
ILE A 485
PHE A 289
 None
 1.17A 1skxA-6dk2A:
undetectable		 1skxA-6dk2A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1cbg CYANOGENIC
BETA-GLUCOSIDASE

(Trifolium
repens) 		PF00232
(Glyco_hydro_1) 		4 PHE A 444
LEU A 488
MET A  82
LEU A 125
 None
 1.15A 1skxA-1cbgA:
0.0		 1skxA-1cbgA:
20.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1f0i PHOSPHOLIPASE D

(Streptomyces
sp. PMF) 		PF13091
(PLDc_2) 		4 LYS A 464
PHE A 459
LEU A 326
LEU A 182
 None
 1.38A 1skxA-1f0iA:
0.0		 1skxA-1f0iA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1kbl PYRUVATE PHOSPHATE
DIKINASE

([Clostridium]
symbiosum) 		PF00391
(PEP-utilizers)
PF01326
(PPDK_N)
PF02896
(PEP-utilizers_C) 		4 LYS A 678
PHE A 626
LEU A 591
LEU A 707
 None
None
None
NH4  A 901 ( 4.3A)
 1.08A 1skxA-1kblA:
0.0		 1skxA-1kblA:
15.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ni3 YCHF GTP-BINDING
PROTEIN

(Schizosaccharomyces
pombe) 		PF01926
(MMR_HSR1)
PF06071
(YchF-GTPase_C) 		4 LYS A 250
PHE A 126
LEU A 246
MET A 265
 None
 1.32A 1skxA-1ni3A:
0.0		 1skxA-1ni3A:
21.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1xqs HSPBP1 PROTEIN

(Homo sapiens) 		PF08609
(Fes1) 		4 PHE A 232
LEU A 209
MET A 239
LEU A 296
 None
 1.36A 1skxA-1xqsA:
0.0		 1skxA-1xqsA:
22.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1yy5 FMS1 PROTEIN

(Saccharomyces
cerevisiae) 		PF01593
(Amino_oxidase) 		4 PHE A 130
LEU A 171
MET A 122
LEU A 150
 None
 1.40A 1skxA-1yy5A:
0.0		 1skxA-1yy5A:
20.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1zof ALKYL
HYDROPEROXIDE-REDUCT
ASE

(Helicobacter
pylori) 		PF00578
(AhpC-TSA)
PF10417
(1-cysPrx_C) 		4 LYS A   5
PHE A  10
LEU A   6
LEU A 116
 None
 1.39A 1skxA-1zofA:
0.0		 1skxA-1zofA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2b25 HYPOTHETICAL PROTEIN

(Homo sapiens) 		PF08704
(GCD14) 		4 LYS A  44
PHE A  53
LEU A  58
LEU A 157
 None
 1.22A 1skxA-2b25A:
0.0		 1skxA-2b25A:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2c47 CASEIN KINASE 1
GAMMA 2 ISOFORM

(Homo sapiens) 		PF00069
(Pkinase) 		4 LYS A 159
PHE A 171
LEU A  96
LEU A 308
 None
 1.20A 1skxA-2c47A:
undetectable		 1skxA-2c47A:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2eig LECTIN

(Lotus
tetragonolobus) 		PF00139
(Lectin_legB) 		4 PHE A  66
LEU A  14
MET A  30
LEU A 102
 None
 1.50A 1skxA-2eigA:
undetectable		 1skxA-2eigA:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2iew INOSITOL
POLYPHOSPHATE
MULTIKINASE

(Saccharomyces
cerevisiae) 		PF03770
(IPK) 		4 LYS A 229
PHE A 124
LEU A 224
LEU A 259
 None
 1.40A 1skxA-2iewA:
undetectable		 1skxA-2iewA:
22.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nz9 BOTULINUM NEUROTOXIN
TYPE A

(Clostridium
botulinum) 		PF01742
(Peptidase_M27)
PF07951
(Toxin_R_bind_C)
PF07952
(Toxin_trans)
PF07953
(Toxin_R_bind_N) 		4 LYS A  84
PHE A 163
LEU A  78
LEU A 151
 None
 1.47A 1skxA-2nz9A:
undetectable		 1skxA-2nz9A:
13.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2p6r AFUHEL308 HELICASE

(Archaeoglobus
fulgidus) 		PF00270
(DEAD)
PF00271
(Helicase_C) 		4 LYS A  53
PHE A  38
LEU A  45
LEU A  96
 None
 1.43A 1skxA-2p6rA:
undetectable		 1skxA-2p6rA:
18.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3d4o DIPICOLINATE
SYNTHASE SUBUNIT A

(Bacillus
halodurans) 		PF01262
(AlaDh_PNT_C)
PF16924
(DpaA_N) 		4 LYS A 172
PHE A 150
LEU A 176
LEU A 262
 None
 1.43A 1skxA-3d4oA:
undetectable		 1skxA-3d4oA:
23.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3e02 UNCHARACTERIZED
PROTEIN DUF849

(Paraburkholderia
xenovorans) 		PF05853
(BKACE) 		4 PHE A 151
LEU A  94
MET A 158
LEU A 196
 None
EDO  A 320 (-4.5A)
None
None
 1.16A 1skxA-3e02A:
undetectable		 1skxA-3e02A:
22.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3f1c PUTATIVE
2-C-METHYL-D-ERYTHRI
TOL 4-PHOSPHATE
CYTIDYLYLTRANSFERASE
2

(Listeria
monocytogenes) 		PF01128
(IspD) 		4 PHE A 171
LEU A 100
MET A  88
LEU A 183
 None
 1.40A 1skxA-3f1cA:
undetectable		 1skxA-3f1cA:
19.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3fgq NEUROSERPIN

(Homo sapiens) 		PF00079
(Serpin) 		4 LYS A  82
PHE A  89
LEU A  81
MET A  76
 None
 1.47A 1skxA-3fgqA:
undetectable		 1skxA-3fgqA:
25.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gkj NIEMANN-PICK C1
PROTEIN

(Homo sapiens) 		PF16414
(NPC1_N) 		4 PHE A 101
LEU A 173
MET A 156
LEU A 111
 None
 1.18A 1skxA-3gkjA:
undetectable		 1skxA-3gkjA:
20.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gnr OS03G0212800 PROTEIN

(Oryza sativa) 		PF00232
(Glyco_hydro_1) 		4 PHE A 442
LEU A 486
MET A  79
LEU A 120
 PHE  A 442 ( 1.3A)
LEU  A 486 ( 0.6A)
MET  A  79 ( 0.0A)
LEU  A 120 ( 0.6A)
 1.10A 1skxA-3gnrA:
undetectable		 1skxA-3gnrA:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jbr VOLTAGE-DEPENDENT
CALCIUM CHANNEL
SUBUNIT
ALPHA-2/DELTA-1

(Oryctolagus
cuniculus) 		PF00092
(VWA)
PF08399
(VWA_N)
PF08473
(VGCC_alpha2) 		4 PHE F 363
LEU F 320
MET F 256
LEU F 429
 None
 1.47A 1skxA-3jbrF:
undetectable		 1skxA-3jbrF:
12.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jd8 NIEMANN-PICK C1
PROTEIN

(Homo sapiens) 		PF02460
(Patched)
PF12349
(Sterol-sensing)
PF16414
(NPC1_N) 		4 PHE A 101
LEU A 173
MET A 156
LEU A 111
 None
 1.17A 1skxA-3jd8A:
1.0		 1skxA-3jd8A:
13.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k8p DSL1
PROTEIN TRANSPORT
PROTEIN SEC39

(Kluyveromyces
lactis;
Saccharomyces
cerevisiae) 		PF08314
(Sec39)
PF11989
(Dsl1_C) 		4 PHE C 438
LEU D 651
MET C 344
LEU C 458
 None
 1.45A 1skxA-3k8pC:
undetectable		 1skxA-3k8pC:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m62 UBIQUITIN
CONJUGATION FACTOR
E4

(Saccharomyces
cerevisiae) 		PF04564
(U-box)
PF10408
(Ufd2P_core) 		4 PHE A 211
LEU A 388
MET A 312
LEU A 295
 None
 1.38A 1skxA-3m62A:
undetectable		 1skxA-3m62A:
14.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3oo9 ABC TRANSPORTER
BINDING PROTEIN ACBH

(Actinoplanes
sp. SE50/110) 		PF01547
(SBP_bac_1) 		4 PHE A 359
LEU A 188
MET A 200
LEU A 375
 GOL  A 414 (-3.5A)
None
None
None
 1.45A 1skxA-3oo9A:
undetectable		 1skxA-3oo9A:
22.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ptk BETA-GLUCOSIDASE
OS4BGLU12

(Oryza sativa) 		PF00232
(Glyco_hydro_1) 		4 PHE A 440
LEU A 484
MET A  78
LEU A 121
 None
 0.97A 1skxA-3ptkA:
undetectable		 1skxA-3ptkA:
19.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3qa8 MGC80376 PROTEIN

(Xenopus laevis) 		PF00069
(Pkinase) 		4 PHE A 390
LEU A 353
MET A 315
LEU A 448
 None
 1.49A 1skxA-3qa8A:
undetectable		 1skxA-3qa8A:
19.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3sv0 CASEIN KINASE I-LIKE

(Oryza sativa) 		PF00069
(Pkinase) 		4 LYS A 122
PHE A 134
LEU A  59
LEU A 269
 None
 1.39A 1skxA-3sv0A:
undetectable		 1skxA-3sv0A:
21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3u1t DMMA HALOALKANE
DEHALOGENASE

(unidentified) 		PF00561
(Abhydrolase_1) 		4 PHE A 210
LEU A  84
MET A 107
LEU A 119
 CL  A 350 (-4.7A)
None
None
None
 1.45A 1skxA-3u1tA:
undetectable		 1skxA-3u1tA:
22.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3vr1 PEPTIDE CHAIN
RELEASE FACTOR 3

(Desulfovibrio
vulgaris) 		PF00009
(GTP_EFTU)
PF03144
(GTP_EFTU_D2)
PF16658
(RF3_C) 		4 PHE A 253
LEU A 249
MET A 154
LEU A 229
 None
 1.39A 1skxA-3vr1A:
undetectable		 1skxA-3vr1A:
20.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3wh7 BETA-GLUCOSIDASE

(metagenomes) 		PF00232
(Glyco_hydro_1) 		4 PHE A 243
LEU A 187
MET A 264
LEU A 252
 None
 0.99A 1skxA-3wh7A:
undetectable		 1skxA-3wh7A:
19.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4cvm UDP-N-ACETYLMURAMOYL
-TRIPEPTIDE--D-ALANY
L-D- ALANINE LIGASE

(Pseudomonas
aeruginosa) 		PF01225
(Mur_ligase)
PF02875
(Mur_ligase_C)
PF08245
(Mur_ligase_M) 		4 PHE A 407
LEU A 420
MET A 400
LEU A 348
 None
 1.46A 1skxA-4cvmA:
undetectable		 1skxA-4cvmA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4dg5 PHOSPHOGLYCERATE
KINASE

(Staphylococcus
aureus) 		PF00162
(PGK) 		4 PHE A 250
LEU A 264
MET A 226
LEU A 379
 None
 1.42A 1skxA-4dg5A:
undetectable		 1skxA-4dg5A:
22.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4eb0 LCC

(uncultured
bacterium) 		PF12695
(Abhydrolase_5) 		4 PHE A 114
LEU A 139
MET A  91
LEU A 203
 None
 1.43A 1skxA-4eb0A:
undetectable		 1skxA-4eb0A:
20.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4esa HEMOGLOBIN ALPHA
CHAIN

(Eleginops
maclovinus) 		PF00042
(Globin) 		4 LYS A  73
LEU A  81
MET A  64
LEU A  13
 None
 1.46A 1skxA-4esaA:
undetectable		 1skxA-4esaA:
15.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4hpe PUTATIVE CELL WALL
HYDROLASE
TN916-LIKE,CTN1-ORF1
7

(Clostridioides
difficile) 		PF00877
(NLPC_P60)
PF13702
(Lysozyme_like) 		4 LYS A  60
PHE A 116
MET A  90
LEU A  47
 None
 1.48A 1skxA-4hpeA:
undetectable		 1skxA-4hpeA:
21.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4m7e PROTEIN
BRASSINOSTEROID
INSENSITIVE 1

(Arabidopsis
thaliana) 		PF00560
(LRR_1)
PF08263
(LRRNT_2)
PF12799
(LRR_4)
PF13516
(LRR_6)
PF13855
(LRR_8) 		4 PHE A 658
LEU A 707
MET A 677
LEU A 556
 None
 1.41A 1skxA-4m7eA:
undetectable		 1skxA-4m7eA:
16.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4n0t U4/U6
SNRNA-ASSOCIATED-SPL
ICING FACTOR PRP24

(Saccharomyces
cerevisiae) 		PF00076
(RRM_1)
PF16842
(RRM_occluded) 		4 PHE A 234
LEU A 286
MET A 258
LEU A 226
 None
 1.47A 1skxA-4n0tA:
undetectable		 1skxA-4n0tA:
19.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4na3 POLYKETIDE SYNTHASE
PKSJ

(Bacillus
subtilis) 		PF00109
(ketoacyl-synt)
PF02801
(Ketoacyl-synt_C)
PF16197
(KAsynt_C_assoc) 		4 PHE A  78
LEU A 114
MET A 159
LEU A  95
 None
 1.43A 1skxA-4na3A:
undetectable		 1skxA-4na3A:
19.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4o7z PHOSPHORIBOSYLAMINOI
MIDAZOLE-SUCCINOCARB
OXAMIDE SYNTHASE

(Pyrococcus
horikoshii) 		PF01259
(SAICAR_synt) 		4 LYS A  82
PHE A  27
LEU A  23
LEU A 176
 None
 1.27A 1skxA-4o7zA:
undetectable		 1skxA-4o7zA:
21.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ou4 ALPHA/BETA HYDROLASE
FOLD-3 DOMAIN
PROTEIN

(Pseudomonas sp.
ECU1011) 		PF07859
(Abhydrolase_3) 		4 LYS A 173
PHE A  84
LEU A 170
LEU A 315
 None
 1.43A 1skxA-4ou4A:
undetectable		 1skxA-4ou4A:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4pj3 INTRON-BINDING
PROTEIN AQUARIUS

(Homo sapiens) 		PF13086
(AAA_11)
PF13087
(AAA_12)
PF16399
(Aquarius_N) 		4 PHE A1123
LEU A1088
MET A1061
LEU A1068
 None
 1.31A 1skxA-4pj3A:
undetectable		 1skxA-4pj3A:
11.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4qlj BETA-GLUCOSIDASE 7

(Oryza sativa) 		PF00232
(Glyco_hydro_1) 		4 PHE A 431
LEU A 474
MET A  77
LEU A 118
 None
 1.09A 1skxA-4qljA:
undetectable		 1skxA-4qljA:
20.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4rmx PHI92_GP150

(Enterobacteria
phage phi92) 		no annotation 4 LYS A 311
PHE A 323
MET A 355
LEU A 363
 None
 1.20A 1skxA-4rmxA:
undetectable		 1skxA-4rmxA:
18.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tqk LECTIN 2

(Agrocybe
aegerita) 		PF13517
(VCBS) 		4 LYS A 377
PHE A 342
LEU A 379
LEU A 291
 None
 1.45A 1skxA-4tqkA:
undetectable		 1skxA-4tqkA:
22.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4uav HALOACID
DEHALOGENASE-LIKE
HYDROLASE
DOMAIN-CONTAINING
PROTEIN AT3G48420

(Arabidopsis
thaliana) 		PF13419
(HAD_2) 		4 LYS A 252
PHE A 304
LEU A 313
LEU A 188
 None
 1.28A 1skxA-4uavA:
undetectable		 1skxA-4uavA:
21.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4xyd NITRIC-OXIDE
REDUCTASE SUBUNIT B

(Roseobacter
denitrificans) 		PF00115
(COX1) 		4 PHE A 339
LEU A 348
MET A 380
LEU A  30
 HEM  A 504 ( 3.8A)
None
HEM  A 501 (-4.3A)
HEM  A 501 (-3.7A)
 1.23A 1skxA-4xydA:
1.6		 1skxA-4xydA:
19.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5b6a PYRIDOXAL KINASE
PDXY

(Pseudomonas
aeruginosa) 		PF08543
(Phos_pyr_kin) 		4 PHE A 283
LEU A 213
MET A 198
LEU A 230
 None
 1.45A 1skxA-5b6aA:
undetectable		 1skxA-5b6aA:
23.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5c6u AMINOTRANSFERASE

(Mycobacterium
tuberculosis) 		PF12897
(Aminotran_MocR) 		4 LYS A 291
PHE A 301
LEU A  75
LEU A  51
 None
 1.36A 1skxA-5c6uA:
undetectable		 1skxA-5c6uA:
21.21
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5e2g BETA-LACTAMASE

(Burkholderia
cenocepacia) 		PF00144
(Beta-lactamase) 		4 PHE A 165
LEU A 101
MET A 161
LEU A 243
 None
None
None
SCN  A 402 ( 4.0A)
 1.42A 1skxA-5e2gA:
undetectable		 1skxA-5e2gA:
20.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5f7u CYCLOALTERNAN-FORMIN
G ENZYME

(Listeria
monocytogenes) 		PF01055
(Glyco_hydro_31)
PF13802
(Gal_mutarotas_2)
PF16338
(DUF4968)
PF16990
(CBM_35) 		4 PHE A 181
LEU A 164
MET A 189
LEU A 243
 None
 1.44A 1skxA-5f7uA:
undetectable		 1skxA-5f7uA:
13.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fqd CASEIN KINASE I
ISOFORM ALPHA

(Homo sapiens) 		PF00069
(Pkinase) 		4 LYS C 130
PHE C 142
LEU C  67
LEU C 277
 None
 1.48A 1skxA-5fqdC:
undetectable		 1skxA-5fqdC:
20.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5g5t ARGONAUTE

(Methanocaldococcus
jannaschii) 		PF02171
(Piwi) 		4 LYS A 354
LEU A 356
MET A 481
LEU A 343
 None
 1.08A 1skxA-5g5tA:
undetectable		 1skxA-5g5tA:
17.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hwq HYDROXYMETHYLGLUTARY
L-COA SYNTHASE

(Myxococcus
xanthus) 		PF01154
(HMG_CoA_synt_N)
PF08540
(HMG_CoA_synt_C) 		4 LYS A 259
PHE A 348
LEU A 213
LEU A 322
 CAA  A 501 (-2.7A)
None
None
None
 1.21A 1skxA-5hwqA:
undetectable		 1skxA-5hwqA:
21.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5i3e PUTATIVE
DEOXYRIBONUCLEASE-2

(Burkholderia
thailandensis) 		PF03265
(DNase_II) 		4 LYS A 102
PHE A 200
LEU A 118
LEU A 160
 None
None
EDO  A 400 (-4.3A)
None
 1.39A 1skxA-5i3eA:
undetectable		 1skxA-5i3eA:
22.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mil DUTPASE FAMILY
PROTEIN

(Staphylococcus
aureus) 		PF08761
(dUTPase_2) 		4 PHE A  41
LEU A 120
MET A  71
LEU A 136
 None
 0.94A 1skxA-5milA:
undetectable		 1skxA-5milA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5nth PUTATIVE
AMINOPEPTIDASE

(Leishmania
major) 		PF00883
(Peptidase_M17) 		4 PHE A 347
LEU A 244
MET A 342
LEU A 207
 None
 1.26A 1skxA-5nthA:
undetectable		 1skxA-5nthA:
18.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5uin FORMYLTRANSFERASE

(Salmonella
enterica) 		PF00551
(Formyl_trans_N)
PF13637
(Ank_4) 		4 LYS A 280
PHE A 298
LEU A 276
LEU A 363
 None
 1.45A 1skxA-5uinA:
undetectable		 1skxA-5uinA:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vhj 26S PROTEASOME
REGULATORY SUBUNIT
10B

(Homo sapiens) 		PF00004
(AAA) 		4 LYS E 298
PHE E 231
LEU E 295
LEU E 182
 None
 1.29A 1skxA-5vhjE:
undetectable		 1skxA-5vhjE:
22.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5voc ENVELOPE
GLYCOPROTEIN H
ENVELOPE
GLYCOPROTEIN L

(Human
betaherpesvirus
5) 		PF01801
(Cytomega_gL)
PF02489
(Herpes_glycop_H)
PF17488
(Herpes_glycoH_C) 		4 PHE B 232
LEU B 246
MET A  92
LEU B  56
 None
 1.48A 1skxA-5vocB:
undetectable		 1skxA-5vocB:
22.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5whs CATALASE-PEROXIDASE

(Neurospora
crassa) 		no annotation 4 PHE A 726
LEU A 618
MET A 734
LEU A 480
 None
 1.48A 1skxA-5whsA:
undetectable		 1skxA-5whsA:
15.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wvg CHITINASE

(Ostrinia
furnacalis) 		no annotation 4 PHE A 658
LEU A 568
MET A 623
LEU A 667
 None
 1.28A 1skxA-5wvgA:
undetectable		 1skxA-5wvgA:
15.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5x6x MRNA CAPPING ENZYME
P5

(Rice dwarf
virus) 		no annotation 4 PHE C 461
LEU C 233
MET C 465
LEU C 406
 None
 1.26A 1skxA-5x6xC:
undetectable		 1skxA-5x6xC:
14.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xag TUBULIN TYROSINE
LIGASE

(Gallus gallus) 		no annotation 4 LYS F 184
PHE F 319
LEU F 186
LEU F  87
 None
None
ACP  F 402 (-4.0A)
None
 1.21A 1skxA-5xagF:
undetectable		 1skxA-5xagF:
14.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5xon PROTEIN THAT FORMS A
COMPLEX WITH SPT4P
TRANSCRIPTION
ELONGATION FACTOR
SPT4

(Komagataella
phaffii) 		PF00467
(KOW)
PF03439
(Spt5-NGN)
PF06093
(Spt4) 		4 LYS V   9
PHE V  77
LEU V  19
LEU W 310
 None
 1.47A 1skxA-5xonV:
undetectable		 1skxA-5xonV:
16.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f1e INTERFERON GAMMA

(Paralichthys
olivaceus) 		no annotation 4 LYS A 122
PHE A  55
LEU A 126
LEU A  38
 None
 1.31A 1skxA-6f1eA:
undetectable		 1skxA-6f1eA:
14.55