SIMILAR PATTERNS OF AMINO ACIDS FOR 1RQP_B_SAMB500_0
List of similar pattern of amino acids derived from ASSAM searchHit | Macromolecule/ Organism |
Pfam | Res. | Interface | HETATM | RMSD | Dali Z-score | Seq. Identity (%) | View | Dock | |
---|---|---|---|---|---|---|---|---|---|---|---|
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1biy | LACTOFERRIN (Bubalus bubalis) |
PF00405(Transferrin) | 5 | LEU A 298ASP A 302SER A 291TRP A 8THR A 10 | None | 1.42A | 1rqpB-1biyA:0.5 | 1rqpB-1biyA:18.92 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1hq0 | CYTOTOXICNECROTIZING FACTOR 1 (Escherichiacoli) |
PF05785(CNF1) | 5 | LEU A 936SER A 958THR A 977PHE A1010SER A 992 | None | 1.43A | 1rqpB-1hq0A:0.0 | 1rqpB-1hq0A:22.02 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1kv9 | TYPE IIQUINOHEMOPROTEINALCOHOLDEHYDROGENASE (Pseudomonasputida) |
PF13360(PQQ_2)PF13442(Cytochrome_CBB3) | 5 | LEU A 640ASP A 638SER A 639TYR A 587PHE A 590 | None | 1.45A | 1rqpB-1kv9A:undetectable | 1rqpB-1kv9A:20.87 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1n76 | LACTOFERRIN (Homo sapiens) |
PF00405(Transferrin) | 5 | LEU A 298ASP A 302SER A 291TRP A 8THR A 10 | None | 1.45A | 1rqpB-1n76A:0.4 | 1rqpB-1n76A:18.01 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1qjm | LACTOFERRIN (Equus caballus) |
PF00405(Transferrin) | 5 | LEU A 298ASP A 302SER A 291TRP A 8THR A 10 | None | 1.38A | 1rqpB-1qjmA:0.0 | 1rqpB-1qjmA:18.08 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 1y7i | SALICYLICACID-BINDING PROTEIN2 (Nicotianatabacum) |
PF12697(Abhydrolase_6) | 5 | ASP A 185LEU A 186SER A 115THR A 54THR A 59 | None | 1.31A | 1rqpB-1y7iA:0.9 | 1rqpB-1y7iA:21.66 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 2c4t | 5'-FLUORO-5'-DEOXYADENOSINE SYNTHASE (Streptomycescattleya) |
PF01887(SAM_adeno_trans) | 10 | ASP A 16LEU A 17ASP A 21SER A 23TRP A 50THR A 76TYR A 77THR A 80PHE A 156SER A 158 | SA8 A1299 (-2.9A)SA8 A1299 ( 4.8A)SA8 A1299 (-3.7A)SA8 A1299 (-3.1A)SA8 A1299 (-4.2A)SA8 A1299 ( 4.7A)NoneSA8 A1299 (-4.0A)SA8 A1299 (-3.5A)SA8 A1299 (-2.6A) | 0.15A | 1rqpB-2c4tA:46.7 | 1rqpB-2c4tA:100.00 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2okx | RHAMNOSIDASE B (Bacillus sp.GL1) |
PF05592(Bac_rhamnosid)PF08531(Bac_rhamnosid_N)PF17389(Bac_rhamnosid6H)PF17390(Bac_rhamnosid_C) | 5 | ASP A 683ASP A 750SER A 763TRP A 684TYR A 843 | NoneNoneNoneNoneGOL A3019 (-4.0A) | 1.49A | 1rqpB-2okxA:0.5 | 1rqpB-2okxA:16.17 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 2p9n | ACTIN-RELATEDPROTEIN 2/3 COMPLEXSUBUNIT 1B (Bos taurus) |
PF00400(WD40) | 5 | LEU C 335SER C 336THR C 347THR C 251SER C 333 | None | 1.48A | 1rqpB-2p9nC:undetectable | 1rqpB-2p9nC:23.53 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 4hsc | STREPTOLYSIN O (Streptococcuspyogenes) |
PF01289(Thiol_cytolysin)PF17440(Thiol_cytolys_C) | 5 | ASP X 205LEU X 206THR X 303TYR X 344PHE X 422 | None | 1.38A | 1rqpB-4hscX:undetectable | 1rqpB-4hscX:19.41 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5jwz | CELLULOSE-BINDINGFAMILY II (Streptomycessp. SirexAA-E) |
PF02012(BNR) | 5 | ASP A 296ASP A 288SER A 290TYR A 298PHE A 301 | None | 1.37A | 1rqpB-5jwzA:undetectable | 1rqpB-5jwzA:17.82 | ||
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target. | 5lmz | FLUORINASE (Streptomycessp. MA37) |
PF01887(SAM_adeno_trans) | 10 | ASP A 16LEU A 17ASP A 21SER A 23TRP A 50THR A 76TYR A 77THR A 80PHE A 156SER A 158 | NoneNoneNoneNoneNoneNone CL A 302 ( 4.6A)NoneNoneNone | 0.22A | 1rqpB-5lmzA:43.1 | 1rqpB-5lmzA:87.33 | ||
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site. | 5tdx | ANCESTRALHYDROXYNITRILE LYASE1 (syntheticconstruct) |
no annotation | 5 | ASP A 182LEU A 183ASP A 119SER A 115THR A 53 | None | 1.50A | 1rqpB-5tdxA:3.0 | 1rqpB-5tdxA:22.08 |