SIMILAR PATTERNS OF AMINO ACIDS FOR 1NOD_B_H4BB902_1

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism
Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1a80 2,5-DIKETO-D-GLUCONI
C ACID REDUCTASE A


(Corynebacterium
sp.)
PF00248
(Aldo_ket_red)
3 ARG A 171
ILE A 255
TRP A 221
None
1.01A 1nodB-1a80A:
undetectable
1nodB-1a80A:
20.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1b0z PROTEIN
(PHOSPHOGLUCOSE
ISOMERASE)


(Geobacillus
stearothermophilus)
PF00342
(PGI)
3 ARG A  36
ILE A 199
TRP A  46
None
0.96A 1nodB-1b0zA:
0.0
1nodB-1b0zA:
21.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1g5b SERINE/THREONINE
PROTEIN PHOSPHATASE


(Escherichia
virus Lambda)
PF00149
(Metallophos)
3 ARG A 162
ILE A 159
TRP A 160
SO4  A3001 (-3.3A)
None
None
0.93A 1nodB-1g5bA:
undetectable
1nodB-1g5bA:
19.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gff BACTERIOPHAGE G4
CAPSID PROTEINS GPF,
GPG, GPJ


(Escherichia
virus G4)
PF02305
(Phage_F)
3 ARG 1 382
ILE 1 168
TRP 1 169
None
1.04A 1nodB-1gff1:
undetectable
1nodB-1gff1:
19.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1gnx BETA-GLUCOSIDASE

(Streptomyces
sp.)
PF00232
(Glyco_hydro_1)
3 ARG A  56
ILE A  46
TRP A  47
None
1.16A 1nodB-1gnxA:
0.0
1nodB-1gnxA:
19.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1hpl LIPASE

(Equus caballus)
PF00151
(Lipase)
PF01477
(PLAT)
3 ARG A 439
ILE A 401
TRP A 402
None
1.11A 1nodB-1hplA:
0.3
1nodB-1hplA:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1iiw SLR1257 PROTEIN

(Synechocystis
sp. PCC 6803)
PF00497
(SBP_bac_3)
3 ARG A  36
ILE A  30
TRP A 224
None
1.16A 1nodB-1iiwA:
0.0
1nodB-1iiwA:
21.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1jqg CARBOXYPEPTIDASE A

(Helicoverpa
armigera)
PF00246
(Peptidase_M14)
PF02244
(Propep_M14)
3 ARG A 302
ILE A 100
TRP A 105
None
1.14A 1nodB-1jqgA:
undetectable
1nodB-1jqgA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1kb0 QUINOHEMOPROTEIN
ALCOHOL
DEHYDROGENASE


(Comamonas
testosteroni)
PF13360
(PQQ_2)
PF13442
(Cytochrome_CBB3)
3 ARG A  67
ILE A 107
TRP A 136
HEC  A 802 (-4.2A)
None
None
1.09A 1nodB-1kb0A:
0.0
1nodB-1kb0A:
20.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1ltm 36 KDA SOLUBLE LYTIC
TRANSGLYCOSYLASE


(Escherichia
coli)
PF13406
(SLT_2)
3 ARG A 167
ILE A 159
TRP A 165
None
1.14A 1nodB-1ltmA:
undetectable
1nodB-1ltmA:
19.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1pgu ACTIN INTERACTING
PROTEIN 1


(Saccharomyces
cerevisiae)
PF00400
(WD40)
3 ARG A 609
ILE A 351
TRP A 362
None
1.10A 1nodB-1pguA:
undetectable
1nodB-1pguA:
18.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1qk1 CREATINE KINASE,
UBIQUITOUS
MITOCHONDRIAL


(Homo sapiens)
PF00217
(ATP-gua_Ptrans)
PF02807
(ATP-gua_PtransN)
3 ARG A 125
ILE A 222
TRP A 223
PO4  A 400 (-3.4A)
None
None
1.02A 1nodB-1qk1A:
undetectable
1nodB-1qk1A:
22.94
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1qw5 NITRIC OXIDE
SYNTHASE, INDUCIBLE


(Mus musculus)
PF02898
(NO_synthase)
3 ARG A 375
ILE A 456
TRP A 457
H4B  A 901 (-3.4A)
H4B  A 901 (-4.7A)
H4B  A 901 ( 3.7A)
0.39A 1nodB-1qw5A:
59.7
1nodB-1qw5A:
100.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1rkx CDP-GLUCOSE-4,6-DEHY
DRATASE


(Yersinia
pseudotuberculosis)
PF16363
(GDP_Man_Dehyd)
3 ARG A 146
ILE A 142
TRP A 141
None
0.96A 1nodB-1rkxA:
undetectable
1nodB-1rkxA:
22.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1uw4 REGULATOR OF
NONSENSE TRANSCRIPTS
2


(Homo sapiens)
PF02854
(MIF4G)
3 ARG B 776
ILE B 816
TRP B 817
None
1.09A 1nodB-1uw4B:
undetectable
1nodB-1uw4B:
19.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1v10 LACCASE

(Rigidoporus
microporus)
PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3)
3 ARG A 121
ILE A 454
TRP A 456
None
CU  A1503 (-3.4A)
None
0.87A 1nodB-1v10A:
undetectable
1nodB-1v10A:
19.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1wlt 176AA LONG
HYPOTHETICAL
DTDP-4-DEHYDRORHAMNO
SE 3,5-EPIMERASE


(Sulfurisphaera
tokodaii)
PF00908
(dTDP_sugar_isom)
3 ARG A  40
ILE A  13
TRP A 111
None
0.95A 1nodB-1wltA:
undetectable
1nodB-1wltA:
18.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1y79 PEPTIDYL-DIPEPTIDASE
DCP


(Escherichia
coli)
PF01432
(Peptidase_M3)
3 ARG 1 248
ILE 1 243
TRP 1 246
None
1.16A 1nodB-1y791:
undetectable
1nodB-1y791:
19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2a46 GFP-LIKE FLUORESCENT
CHROMOPROTEIN
AMFP486


(Anemonia majano)
PF01353
(GFP)
3 ARG A  72
ILE A 113
TRP A 111
CR7  A  68 ( 4.4A)
None
CR7  A  68 ( 4.1A)
0.95A 1nodB-2a46A:
undetectable
1nodB-2a46A:
20.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ayu NUCLEOSOME ASSEMBLY
PROTEIN


(Saccharomyces
cerevisiae)
PF00956
(NAP)
3 ARG A 355
ILE A 131
TRP A 132
None
0.98A 1nodB-2ayuA:
undetectable
1nodB-2ayuA:
22.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2c40 INOSINE-URIDINE
PREFERRING
NUCLEOSIDE HYDROLASE
FAMILY PROTEIN


(Bacillus
anthracis)
PF01156
(IU_nuc_hydro)
3 ARG A 156
ILE A 194
TRP A 246
None
0.98A 1nodB-2c40A:
undetectable
1nodB-2c40A:
21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2fa8 HYPOTHETICAL PROTEIN
ATU0228


(Agrobacterium
fabrum)
PF10262
(Rdx)
3 ARG A  64
ILE A  52
TRP A  60
None
1.11A 1nodB-2fa8A:
undetectable
1nodB-2fa8A:
14.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2fkn UROCANATE HYDRATASE

(Bacillus
subtilis)
PF01175
(Urocanase)
PF17391
(Urocanase_N)
PF17392
(Urocanase_C)
3 ARG A 414
ILE A 406
TRP A 408
None
0.88A 1nodB-2fknA:
undetectable
1nodB-2fknA:
19.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2i51 UNCHARACTERIZED
CONSERVED PROTEIN OF
COG5135


(Nostoc
punctiforme)
PF12766
(Pyridox_oxase_2)
3 ARG A 109
ILE A 148
TRP A 113
None
1.14A 1nodB-2i51A:
undetectable
1nodB-2i51A:
18.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ljr GLUTATHIONE
S-TRANSFERASE


(Homo sapiens)
PF00043
(GST_C)
PF02798
(GST_N)
3 ARG A 107
ILE A 112
TRP A 115
None
1.14A 1nodB-2ljrA:
undetectable
1nodB-2ljrA:
18.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2nty EMB|CAB41934.1

(Arabidopsis
thaliana)
PF03759
(PRONE)
3 ARG A 118
ILE A 125
TRP A  69
None
1.11A 1nodB-2ntyA:
undetectable
1nodB-2ntyA:
22.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2otb GFP-LIKE FLUORESCENT
CHROMOPROTEIN CFP484


(Clavularia sp.)
PF01353
(GFP)
3 ARG A  70
ILE A 111
TRP A  93
PIA  A  66 ( 4.1A)
None
PIA  A  66 ( 4.1A)
1.09A 1nodB-2otbA:
undetectable
1nodB-2otbA:
20.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2pes URICASE

(Aspergillus
flavus)
PF01014
(Uricase)
3 ARG A 128
ILE A 142
TRP A 188
None
0.94A 1nodB-2pesA:
undetectable
1nodB-2pesA:
20.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2v7g UROCANATE HYDRATASE

(Pseudomonas
putida)
PF01175
(Urocanase)
PF17391
(Urocanase_N)
PF17392
(Urocanase_C)
3 ARG A 418
ILE A 410
TRP A 412
None
0.87A 1nodB-2v7gA:
undetectable
1nodB-2v7gA:
23.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2wtb FATTY ACID
MULTIFUNCTIONAL
PROTEIN (ATMFP2)


(Arabidopsis
thaliana)
PF00378
(ECH_1)
PF00725
(3HCDH)
PF02737
(3HCDH_N)
3 ARG A 127
ILE A 204
TRP A 200
None
1.13A 1nodB-2wtbA:
undetectable
1nodB-2wtbA:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2z2r NUCLEOSOME ASSEMBLY
PROTEIN


(Saccharomyces
cerevisiae)
PF00956
(NAP)
3 ARG A 355
ILE A 131
TRP A 132
None
1.13A 1nodB-2z2rA:
undetectable
1nodB-2z2rA:
23.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2zsi PROBABLE GIBBERELLIN
RECEPTOR GID1L1


(Arabidopsis
thaliana)
PF07859
(Abhydrolase_3)
3 ARG A 226
ILE A 291
TRP A 294
None
1.01A 1nodB-2zsiA:
undetectable
1nodB-2zsiA:
21.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3a1z HEMOLYMPH JUVENILE
HORMONE BINDING
PROTEIN


(Bombyx mori)
PF06585
(JHBP)
3 ARG A 209
ILE A  37
TRP A  38
None
None
ZN  A 226 (-4.4A)
1.14A 1nodB-3a1zA:
undetectable
1nodB-3a1zA:
21.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cji POLYPROTEIN

(Senecavirus A)
no annotation 3 ARG A 169
ILE A 217
TRP A 140
None
1.12A 1nodB-3cjiA:
undetectable
1nodB-3cjiA:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dfr DIHYDROFOLATE
REDUCTASE


(Lactobacillus
casei)
PF00186
(DHFR_1)
3 ARG A 117
ILE A  13
TRP A   5
None
NDP  A 163 (-3.8A)
None
0.86A 1nodB-3dfrA:
undetectable
1nodB-3dfrA:
16.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dko EPHRIN TYPE-A
RECEPTOR 7


(Homo sapiens)
PF07714
(Pkinase_Tyr)
PF14575
(EphA2_TM)
3 ARG A 835
ILE A 824
TRP A 802
None
1.13A 1nodB-3dkoA:
undetectable
1nodB-3dkoA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3dmb PUTATIVE GENERAL
STRESS PROTEIN 26
WITH A PNP-OXIDASE
LIKE FOLD


(Xanthomonas
campestris)
PF16242
(Pyrid_ox_like)
3 ARG A  88
ILE A  48
TRP A  49
None
1.14A 1nodB-3dmbA:
undetectable
1nodB-3dmbA:
16.99
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3e7g NITRIC OXIDE
SYNTHASE, INDUCIBLE


(Homo sapiens)
PF02898
(NO_synthase)
3 ARG A 381
ILE A 462
TRP A 463
H4B  A 902 (-3.9A)
H4B  A 902 (-4.9A)
H4B  A 902 ( 3.6A)
0.33A 1nodB-3e7gA:
57.6
1nodB-3e7gA:
87.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3gbd SUCROSE ISOMERASE
SMUA FROM
PROTAMINOBACTER
RUBRUM


(Serratia
plymuthica)
PF00128
(Alpha-amylase)
PF16657
(Malt_amylase_C)
3 ARG A 485
ILE A 290
TRP A 333
None
0.98A 1nodB-3gbdA:
undetectable
1nodB-3gbdA:
20.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3iy7 FRAGMENT FROM
NEUTRALIZING
ANTIBODY F (HEAVY
CHAIN)


(Rattus
norvegicus)
PF07686
(V-set)
3 ARG B 164
ILE B 148
TRP B 147
None
1.13A 1nodB-3iy7B:
undetectable
1nodB-3iy7B:
13.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3j81 US2

(Kluyveromyces
lactis)
PF00318
(Ribosomal_S2)
3 ARG A 183
ILE A  57
TRP A  54
None
1.13A 1nodB-3j81A:
undetectable
1nodB-3j81A:
19.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3jq3 LOMBRICINE KINASE

(Urechis caupo)
PF00217
(ATP-gua_Ptrans)
PF02807
(ATP-gua_PtransN)
3 ARG A 117
ILE A 214
TRP A 215
ADP  A 400 (-2.6A)
None
None
0.82A 1nodB-3jq3A:
undetectable
1nodB-3jq3A:
21.40
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k7t 6-HYDROXY-L-NICOTINE
OXIDASE


(Paenarthrobacter
nicotinovorans)
PF01593
(Amino_oxidase)
3 ARG A 273
ILE A 263
TRP A 260
None
1.10A 1nodB-3k7tA:
undetectable
1nodB-3k7tA:
22.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3lwd 6-PHOSPHOGLUCONOLACT
ONASE


(Chromohalobacter
salexigens)
PF01182
(Glucosamine_iso)
3 ARG A 195
ILE A 188
TRP A 223
None
1.15A 1nodB-3lwdA:
undetectable
1nodB-3lwdA:
19.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m1u PUTATIVE
GAMMA-D-GLUTAMYL-L-D
IAMINO ACID
ENDOPEPTIDASE


(Desulfovibrio
vulgaris)
PF00877
(NLPC_P60)
PF12912
(N_NLPC_P60)
PF12913
(SH3_6)
PF12914
(SH3_7)
3 ARG A 390
ILE A 393
TRP A 388
None
0.92A 1nodB-3m1uA:
undetectable
1nodB-3m1uA:
21.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3m6m RPFF PROTEIN

(Xanthomonas
campestris)
PF00378
(ECH_1)
3 ARG A  24
ILE A  19
TRP A  28
None
1.08A 1nodB-3m6mA:
undetectable
1nodB-3m6mA:
21.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3opy 6-PHOSPHOFRUCTO-1-KI
NASE ALPHA-SUBUNIT


(Komagataella
pastoris)
PF00365
(PFK)
3 ARG A 230
ILE A 237
TRP A 265
SO4  A 996 (-4.3A)
None
None
1.05A 1nodB-3opyA:
undetectable
1nodB-3opyA:
17.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3p4s FUMARATE REDUCTASE
FLAVOPROTEIN SUBUNIT


(Escherichia
coli)
PF00890
(FAD_binding_2)
PF02910
(Succ_DH_flav_C)
3 ARG A 529
ILE A 570
TRP A  75
None
0.97A 1nodB-3p4sA:
undetectable
1nodB-3p4sA:
21.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3s9v ABIETADIENE
SYNTHASE,
CHLOROPLASTIC


(Abies grandis)
PF01397
(Terpene_synth)
PF03936
(Terpene_synth_C)
3 ARG A 749
ILE A 685
TRP A 689
None
0.94A 1nodB-3s9vA:
undetectable
1nodB-3s9vA:
20.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3t6w LACCASE

(Steccherinum
ochraceum)
PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3)
3 ARG A 122
ILE A 455
TRP A 457
None
CU  A 501 (-3.8A)
None
0.79A 1nodB-3t6wA:
undetectable
1nodB-3t6wA:
20.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3tw5 TRANSGLUTAMINASE
ELICITOR


(Phytophthora
sojae)
PF16683
(TGase_elicitor)
3 ARG A 438
ILE A 442
TRP A 441
None
0.96A 1nodB-3tw5A:
undetectable
1nodB-3tw5A:
21.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3v0a NTNH

(Clostridium
botulinum)
PF01742
(Peptidase_M27)
PF07953
(Toxin_R_bind_N)
PF08470
(NTNH_C)
3 ARG B  24
ILE B 201
TRP B 202
None
1.05A 1nodB-3v0aB:
undetectable
1nodB-3v0aB:
14.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3w36 NAPH1

(Streptomyces
sp. CNQ525)
no annotation 3 ARG A 385
ILE A 406
TRP A 411
None
0.67A 1nodB-3w36A:
undetectable
1nodB-3w36A:
21.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4bxs VENOM PROTHROMBIN
ACTIVATOR
PSEUTARIN-C
NON-CATALYTIC
SUBUNIT


(Pseudonaja
textilis)
PF00754
(F5_F8_type_C)
PF07732
(Cu-oxidase_3)
3 ARG V 926
ILE V 961
TRP V 939
None
1.00A 1nodB-4bxsV:
undetectable
1nodB-4bxsV:
15.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4czx PAB-DEPENDENT
POLY(A)-SPECIFIC
RIBONUCLEASE SUBUNIT
PAN2
PAB-DEPENDENT
POLY(A)-SPECIFIC
RIBONUCLEASE SUBUNIT
PAN3


(Neurospora
crassa)
no annotation 3 ARG A 104
ILE A  64
TRP B 566
PO4  A 401 (-4.0A)
None
None
1.00A 1nodB-4czxA:
undetectable
1nodB-4czxA:
21.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ddw REVERSE GYRASE

(Thermotoga
maritima)
PF00270
(DEAD)
PF01131
(Topoisom_bac)
PF01751
(Toprim)
3 ARG A 931
ILE A 859
TRP A 885
None
1.03A 1nodB-4ddwA:
undetectable
1nodB-4ddwA:
16.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4g0j NON-STRUCTURAL
PROTEIN 2


(Rotavirus A)
PF02509
(Rota_NS35)
3 ARG A 227
ILE A 265
TRP A 269
None
0.83A 1nodB-4g0jA:
undetectable
1nodB-4g0jA:
19.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4gw9 BACTERIOPHYTOCHROME

(Rhodopseudomonas
palustris)
PF00360
(PHY)
PF00989
(PAS)
PF01590
(GAF)
PF08446
(PAS_2)
3 ARG A 391
ILE A 385
TRP A 388
None
1.07A 1nodB-4gw9A:
undetectable
1nodB-4gw9A:
20.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4hjj ANTI-IL12 ANTI-IL18
DFAB HEAVY CHAIN


(Homo sapiens)
PF07654
(C1-set)
PF07686
(V-set)
3 ARG H 100
ILE H  39
TRP H  49
None
1.04A 1nodB-4hjjH:
undetectable
1nodB-4hjjH:
22.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4jc2 ASFP504

(Alcyonium)
PF01353
(GFP)
3 ARG A  66
ILE A 107
TRP A  89
CRQ  A  64 ( 4.3A)
None
CRQ  A  64 ( 3.9A)
1.09A 1nodB-4jc2A:
undetectable
1nodB-4jc2A:
19.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4kh8 HYPOTHETICAL PROTEIN

(Enterococcus
faecalis)
PF16103
(DUF4822)
3 ARG A 190
ILE A  89
TRP A  65
None
1.09A 1nodB-4kh8A:
undetectable
1nodB-4kh8A:
20.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4okj 3'-5'
EXORIBONUCLEASE
RV2179C/MT2234.1


(Mycobacterium
tuberculosis)
PF16473
(DUF5051)
3 ARG A 135
ILE A 156
TRP A 124
None
0.99A 1nodB-4okjA:
undetectable
1nodB-4okjA:
15.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4tsk KETOL-ACID
REDUCTOISOMERASE


(Alicyclobacillus
acidocaldarius)
PF01450
(IlvC)
PF07991
(IlvN)
3 ARG A  84
ILE A 291
TRP A 290
None
1.13A 1nodB-4tskA:
undetectable
1nodB-4tskA:
21.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zb3 NUDIX HYDROLASE 7

(Arabidopsis
thaliana)
PF00293
(NUDIX)
3 ARG A  74
ILE A  53
TRP A  54
None
1.09A 1nodB-4zb3A:
undetectable
1nodB-4zb3A:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zkt BOTULINUM NEUROTOXIN
TYPE E,
NONTOXIC-NONHEMAGGLU
TININ COMPONENT,
NTNH


(Clostridium
botulinum)
PF01742
(Peptidase_M27)
PF07953
(Toxin_R_bind_N)
PF08470
(NTNH_C)
3 ARG B  24
ILE B 168
TRP B 169
None
1.13A 1nodB-4zktB:
undetectable
1nodB-4zktB:
16.01
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zxi TYROCIDINE
SYNTHETASE 3


(Acinetobacter
baumannii)
PF00501
(AMP-binding)
PF00550
(PP-binding)
PF00668
(Condensation)
PF00975
(Thioesterase)
PF13193
(AMP-binding_C)
3 ARG A1164
ILE A1161
TRP A1134
None
0.75A 1nodB-4zxiA:
undetectable
1nodB-4zxiA:
15.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4zxi TYROCIDINE
SYNTHETASE 3


(Acinetobacter
baumannii)
PF00501
(AMP-binding)
PF00550
(PP-binding)
PF00668
(Condensation)
PF00975
(Thioesterase)
PF13193
(AMP-binding_C)
3 ARG A1164
ILE A1298
TRP A1134
None
1.02A 1nodB-4zxiA:
undetectable
1nodB-4zxiA:
15.47
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5an9 60S RIBOSOMAL
PROTEIN L24


(Dictyostelium
discoideum)
PF01246
(Ribosomal_L24e)
3 ARG G  56
ILE G  49
TRP G  51
None
1.02A 1nodB-5an9G:
undetectable
1nodB-5an9G:
8.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5c2v HYDRAZINE SYNTHASE
ALPHA SUBUNIT


(Candidatus
Kuenenia
stuttgartiensis)
no annotation 3 ARG A 227
ILE A 163
TRP A 423
None
1.15A 1nodB-5c2vA:
undetectable
1nodB-5c2vA:
19.52
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5cs4 ACETYL-COA
CARBOXYLASE


(Saccharomyces
cerevisiae)
PF08326
(ACC_central)
3 ARG A1173
ILE A1115
TRP A1131
None
0.93A 1nodB-5cs4A:
1.3
1nodB-5cs4A:
20.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5csa ACETYL-COA
CARBOXYLASE


(Saccharomyces
cerevisiae)
PF00364
(Biotin_lipoyl)
PF08326
(ACC_central)
3 ARG A1173
ILE A1115
TRP A1131
None
1.09A 1nodB-5csaA:
1.6
1nodB-5csaA:
19.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ehf LACCASE

(Antrodiella
faginea)
PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3)
3 ARG A 121
ILE A 453
TRP A 455
None
CU  A 510 (-3.7A)
None
0.82A 1nodB-5ehfA:
undetectable
1nodB-5ehfA:
21.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5f2v GTP
PYROPHOSPHOKINASE
YJBM


(Bacillus
subtilis)
no annotation 3 ARG V 143
ILE V 153
TRP V 150
APC  V 301 ( 4.9A)
None
None
0.97A 1nodB-5f2vV:
undetectable
1nodB-5f2vV:
20.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5flz TUBULIN GAMMA CHAIN

(Saccharomyces
cerevisiae)
PF00091
(Tubulin)
PF03953
(Tubulin_C)
3 ARG C 114
ILE C 119
TRP C  93
None
1.08A 1nodB-5flzC:
undetectable
1nodB-5flzC:
20.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fsy MACRODOMAIN

(Trypanosoma
brucei)
PF01661
(Macro)
3 ARG A 169
ILE A  57
TRP A  76
None
0.96A 1nodB-5fsyA:
undetectable
1nodB-5fsyA:
23.04
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5fur TRANSCRIPTION
INITIATION FACTOR
TFIID SUBUNIT 2


(Homo sapiens)
no annotation 3 ARG I 361
ILE I 417
TRP I 368
None
1.14A 1nodB-5furI:
undetectable
1nodB-5furI:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5gzu CHITINASE

(Paenibacillus
sp. FPU-7)
PF00704
(Glyco_hydro_18)
3 ARG A1190
ILE A1187
TRP A1176
None
1.06A 1nodB-5gzuA:
undetectable
1nodB-5gzuA:
18.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5i6e ACETYL-COA
CARBOXYLASE


(Saccharomyces
cerevisiae)
PF08326
(ACC_central)
3 ARG A1173
ILE A1115
TRP A1131
SEP  A1157 ( 2.8A)
None
None
0.87A 1nodB-5i6eA:
undetectable
1nodB-5i6eA:
20.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ibv CAPSID POLYPROTEIN
VP90


(Mamastrovirus 1)
PF03115
(Astro_capsid_N)
3 ARG A 179
ILE A 102
TRP A 350
None
1.08A 1nodB-5ibvA:
undetectable
1nodB-5ibvA:
20.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ja1 ENTEROBACTIN
SYNTHASE COMPONENT F


(Escherichia
coli)
PF00501
(AMP-binding)
PF00550
(PP-binding)
PF00668
(Condensation)
PF00975
(Thioesterase)
PF13193
(AMP-binding_C)
3 ARG A 623
ILE A 659
TRP A 656
None
1.08A 1nodB-5ja1A:
undetectable
1nodB-5ja1A:
15.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mew LACCASE 2

(Steccherinum
murashkinskyi)
PF00394
(Cu-oxidase)
PF07731
(Cu-oxidase_2)
PF07732
(Cu-oxidase_3)
3 ARG A 122
ILE A 455
TRP A 457
None
CU  A 504 (-3.8A)
None
0.83A 1nodB-5mewA:
undetectable
1nodB-5mewA:
22.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mqp GLYCOSIDE HYDROLASE
BT_1002


(Bacteroides
thetaiotaomicron)
no annotation 3 ARG A  97
ILE A  22
TRP A  23
None
1.14A 1nodB-5mqpA:
undetectable
1nodB-5mqpA:
20.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5n77 MAGNESIUM TRANSPORT
PROTEIN CORA


(Escherichia
coli)
PF01544
(CorA)
3 ARG A  14
ILE A  29
TRP A  28
None
1.11A 1nodB-5n77A:
undetectable
1nodB-5n77A:
22.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ojr -

(-)
no annotation 3 ARG A  82
ILE A  64
TRP A  70
None
1.11A 1nodB-5ojrA:
undetectable
1nodB-5ojrA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5oqj RNA POLYMERASE II
TRANSCRIPTION FACTOR
B SUBUNIT 1


(Saccharomyces
cerevisiae)
no annotation 3 ARG 1  30
ILE 1  16
TRP 1  29
None
0.90A 1nodB-5oqj1:
undetectable
1nodB-5oqj1:
11.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5oqm GENERAL
TRANSCRIPTION AND
DNA REPAIR FACTOR
IIH SUBUNIT TFB1


(Saccharomyces
cerevisiae)
no annotation 3 ARG 1  30
ILE 1  16
TRP 1  29
None
0.87A 1nodB-5oqm1:
undetectable
1nodB-5oqm1:
11.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5tey N6-ADENOSINE-METHYLT
RANSFERASE 70 KDA
SUBUNIT


(Homo sapiens)
PF05063
(MT-A70)
3 ARG A 508
ILE A 503
TRP A 457
None
0.95A 1nodB-5teyA:
undetectable
1nodB-5teyA:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5u6o POTASSIUM/SODIUM
HYPERPOLARIZATION-AC
TIVATED CYCLIC
NUCLEOTIDE-GATED
CHANNEL 1


(Homo sapiens)
PF00027
(cNMP_binding)
PF00520
(Ion_trans)
PF08412
(Ion_trans_N)
3 ARG A 267
ILE A 176
TRP A 175
None
1.16A 1nodB-5u6oA:
undetectable
1nodB-5u6oA:
19.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5uhe DNA-DIRECTED RNA
POLYMERASE SUBUNIT
BETA'


(Mycobacterium
tuberculosis)
PF00623
(RNA_pol_Rpb1_2)
PF04983
(RNA_pol_Rpb1_3)
PF04997
(RNA_pol_Rpb1_1)
PF04998
(RNA_pol_Rpb1_5)
PF05000
(RNA_pol_Rpb1_4)
3 ARG D 113
ILE D 104
TRP D 105
None
0.87A 1nodB-5uheD:
undetectable
1nodB-5uheD:
15.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5vf4 UNCHARACTERIZED
PROTEIN


(Thermus
aquaticus)
PF03781
(FGE-sulfatase)
3 ARG A 370
ILE A  93
TRP A 201
None
1.13A 1nodB-5vf4A:
undetectable
1nodB-5vf4A:
22.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ygh CAPSID PROTEIN

(Zika virus)
no annotation 3 ARG A  55
ILE A  66
TRP A  69
None
0.94A 1nodB-5yghA:
undetectable
1nodB-5yghA:
12.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5yqw PEPTIDE ABC
TRANSPORTER,
PERIPLASMIC
PEPTIDE-BINDING
PROTEIN


(Vibrio harveyi)
no annotation 3 ARG A 509
ILE A 512
TRP A 513
None
None
CBS  A 604 (-3.8A)
1.10A 1nodB-5yqwA:
undetectable
1nodB-5yqwA:
12.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5z0r EXTRACELLULAR
SOLUTE-BINDING
PROTEIN FAMILY
1,VIRAL GENOME
PROTEIN


(Escherichia
coli)
no annotation 3 ARG A 402
ILE A 413
TRP A 416
None
1.04A 1nodB-5z0rA:
undetectable
1nodB-5z0rA:
12.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5z5d BETA-XYLOSIDASE

(Geobacillus
thermoleovorans)
no annotation 3 ARG A 142
ILE A 114
TRP A 117
None
1.15A 1nodB-5z5dA:
undetectable
1nodB-5z5dA:
9.83
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6b0t FASCIN

(Homo sapiens)
no annotation 3 ARG A 224
ILE A  93
TRP A 101
None
C7V  A 501 ( 4.2A)
C7V  A 501 (-3.2A)
1.14A 1nodB-6b0tA:
undetectable
1nodB-6b0tA:
13.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6byk 14-3-3 PROTEIN
BETA/ALPHA


(Homo sapiens)
no annotation 3 ARG A  58
ILE A  88
TRP A  61
None
1.10A 1nodB-6bykA:
undetectable
1nodB-6bykA:
10.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6c7v -

(-)
no annotation 3 ARG A 202
ILE A  11
TRP A  50
None
1.12A 1nodB-6c7vA:
undetectable
1nodB-6c7vA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6cfz ASK1
DAD4


(Chaetomium
thermophilum)
no annotation 3 ARG A  59
ILE E  44
TRP A  62
None
0.95A 1nodB-6cfzA:
undetectable
1nodB-6cfzA:
10.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ei1 ZINC FINGER WITH
UFM1-SPECIFIC
PEPTIDASE DOMAIN
PROTEIN


(Homo sapiens)
no annotation 3 ARG A 338
ILE A 498
TRP A 341
None
0.85A 1nodB-6ei1A:
undetectable
1nodB-6ei1A:
11.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6f5o POLYMERASE BASIC
PROTEIN 2
RNA-DIRECTED RNA
POLYMERASE CATALYTIC
SUBUNIT


(Influenza B
virus)
no annotation 3 ARG B 622
ILE B 574
TRP C 100
None
1.07A 1nodB-6f5oB:
undetectable
1nodB-6f5oB:
12.43