SIMILAR PATTERNS OF AMINO ACIDS FOR 1L7G_A_BCZA801_0

List of similar pattern of amino acids derived from ASSAM search

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click link on the last column to view superposed patterns of amino acids in NGL viewer)
(Note that only 3-12 residue patterns can be used for ASSAM searches)
Filter list by:
Hit Macromolecule/
Organism		 Pfam Res. Interface HETATM RMSD Dali Z-score Seq. Identity (%) View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1e6y METHYL-COENZYME M
REDUCTASE SUBUNIT
GAMMA

(Methanosarcina
barkeri) 		PF02240
(MCR_gamma) 		5 LEU C3029
ASP C3145
ARG C3030
GLU C3208
GLU C3207
 None
 1.43A 1l7gA-1e6yC:
undetectable		 1l7gA-1e6yC:
22.03
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1nmb N9 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU N 134
ASP N 151
ARG N 152
ARG N 156
TRP N 178
ILE N 222
ARG N 224
GLU N 227
GLU N 276
GLU N 277
ARG N 292
TYR N 406
 None
 0.66A 1l7gA-1nmbN:
73.3		 1l7gA-1nmbN:
96.39
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1v0z NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 140
ASP A 157
ARG A 158
ARG A 162
TRP A 185
ILE A 229
ARG A 231
GLU A 234
GLU A 283
GLU A 284
ARG A 299
TYR A 412
 None
 0.23A 1l7gA-1v0zA:
73.1		 1l7gA-1v0zA:
69.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ARG A 150
ARG A 154
TRP A 177
ILE A 221
GLU A 275
 IBA  A   1 (-3.9A)
IBA  A   1 (-4.1A)
None
IBA  A   1 ( 4.3A)
IBA  A   1 (-4.1A)
 1.33A 1l7gA-1vcjA:
53.6		 1l7gA-1vcjA:
30.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ARG A 150
ILE A 221
GLU A 117
GLU A 275
TYR A 409
 IBA  A   1 (-3.9A)
IBA  A   1 ( 4.3A)
IBA  A   1 (-3.9A)
IBA  A   1 (-4.1A)
None
 1.42A 1l7gA-1vcjA:
53.6		 1l7gA-1vcjA:
30.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ASP A 149
ARG A 150
ILE A 221
ARG A 223
GLU A 226
 IBA  A   1 (-3.6A)
IBA  A   1 (-3.9A)
IBA  A   1 ( 4.3A)
IBA  A   1 ( 4.5A)
IBA  A   1 (-3.9A)
 1.32A 1l7gA-1vcjA:
53.6		 1l7gA-1vcjA:
30.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		9 ASP A 149
ARG A 150
TRP A 177
ILE A 221
ARG A 223
GLU A 275
GLU A 276
ARG A 292
TYR A 409
 IBA  A   1 (-3.6A)
IBA  A   1 (-3.9A)
None
IBA  A   1 ( 4.3A)
IBA  A   1 ( 4.5A)
IBA  A   1 (-4.1A)
IBA  A   1 (-3.9A)
IBA  A   1 (-3.5A)
None
 1.14A 1l7gA-1vcjA:
53.6		 1l7gA-1vcjA:
30.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1vcj NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		11 LEU A 132
ASP A 149
ARG A 150
ARG A 154
TRP A 177
ILE A 221
ARG A 223
GLU A 226
GLU A 276
ARG A 292
TYR A 409
 None
IBA  A   1 (-3.6A)
IBA  A   1 (-3.9A)
IBA  A   1 (-4.1A)
None
IBA  A   1 ( 4.3A)
IBA  A   1 ( 4.5A)
IBA  A   1 (-3.9A)
IBA  A   1 (-3.9A)
IBA  A   1 (-3.5A)
None
 0.58A 1l7gA-1vcjA:
53.6		 1l7gA-1vcjA:
30.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1xog NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 135
ASP A 152
ARG A 153
ARG A 157
TRP A 180
ILE A 224
ARG A 226
GLU A 229
GLU A 278
GLU A 279
ARG A 294
TYR A 406
 None
ABW  A1000 (-3.7A)
ABW  A1000 (-4.1A)
ABW  A1000 (-4.2A)
None
ABW  A1000 ( 4.7A)
None
ABW  A1000 ( 4.0A)
ABW  A1000 (-4.1A)
ABW  A1000 (-4.5A)
ABW  A1000 (-3.4A)
ABW  A1000 (-4.9A)
 0.47A 1l7gA-1xogA:
75.0		 1l7gA-1xogA:
99.74
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2htv NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		11 LEU A 134
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
 0.62A 1l7gA-2htvA:
62.8		 1l7gA-2htvA:
44.25
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2htv NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		11 LEU A 134
ASP A 151
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
 0.77A 1l7gA-2htvA:
62.8		 1l7gA-2htvA:
44.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2yfn ALPHA-GALACTOSIDASE-
SUCROSE KINASE AGASK

([Ruminococcus]
gnavus) 		PF02065
(Melibiase)
PF16874
(Glyco_hydro_36C)
PF16875
(Glyco_hydro_36N) 		5 LEU A 448
TRP A 383
ILE A 412
ARG A 524
TYR A 495
 None
 1.48A 1l7gA-2yfnA:
undetectable		 1l7gA-2yfnA:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3aii GLUTAMYL-TRNA
SYNTHETASE

(Methanothermobacter
thermautotrophicus) 		PF00749
(tRNA-synt_1c)
PF03950
(tRNA-synt_1c_C) 		5 LEU A 440
ASP A 462
ARG A 533
GLU A 532
ARG A 403
 None
 1.26A 1l7gA-3aiiA:
undetectable		 1l7gA-3aiiA:
19.05
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ckz NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		5 ASP A 151
ARG A 152
TRP A 178
GLU A 276
ARG A 292
 ZMR  A 469 (-3.5A)
ZMR  A 469 (-3.9A)
None
ZMR  A 469 (-2.8A)
ZMR  A 469 (-3.0A)
 1.45A 1l7gA-3ckzA:
64.4		 1l7gA-3ckzA:
47.95
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ckz NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
ZMR  A 469 (-3.5A)
ZMR  A 469 (-3.9A)
ZMR  A 469 (-3.4A)
None
None
ZMR  A 469 (-4.4A)
ZMR  A 469 (-3.5A)
ZMR  A 469 (-2.8A)
ZMR  A 469 (-3.7A)
ZMR  A 469 (-3.0A)
ZMR  A 469 (-4.7A)
 0.69A 1l7gA-3ckzA:
64.4		 1l7gA-3ckzA:
47.95
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3cx6 GUANINE
NUCLEOTIDE-BINDING
PROTEIN ALPHA-13
SUBUNIT

(Mus musculus) 		PF00503
(G-alpha) 		5 ARG A 230
TRP A 233
ILE A 271
GLU A 251
ARG A 264
 None
 1.29A 1l7gA-3cx6A:
undetectable		 1l7gA-3cx6A:
22.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3k0s DNA MISMATCH REPAIR
PROTEIN MUTS

(Escherichia
coli) 		PF00488
(MutS_V)
PF01624
(MutS_I)
PF05188
(MutS_II)
PF05190
(MutS_IV)
PF05192
(MutS_III) 		5 LEU A 407
ASP A 364
ARG A 367
ARG A 363
TYR A 528
 None
 1.49A 1l7gA-3k0sA:
undetectable		 1l7gA-3k0sA:
18.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3koy D-ORNITHINE
AMINOMUTASE E
COMPONENT

(Acetoanaerobium
sticklandii) 		PF02310
(B12-binding)
PF09043
(Lys-AminoMut_A)
PF16554
(OAM_dimer) 		5 LEU A  55
ASP A 103
ILE A 105
GLU A 148
ARG A  29
 None
 1.37A 1l7gA-3koyA:
undetectable		 1l7gA-3koyA:
19.13
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3ti8 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
LNV  A 901 (-3.4A)
LNV  A 901 (-4.0A)
LNV  A 901 (-4.0A)
None
None
LNV  A 901 (-4.1A)
LNV  A 901 (-3.4A)
LNV  A 901 (-2.9A)
LNV  A 901 ( 3.8A)
LNV  A 901 (-2.8A)
LNV  A 901 (-4.8A)
 0.45A 1l7gA-3ti8A:
65.0		 1l7gA-3ti8A:
43.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3tia NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
LNV  A 801 (-3.4A)
LNV  A 801 (-3.9A)
LNV  A 801 (-4.0A)
None
None
LNV  A 801 (-4.2A)
LNV  A 801 (-3.5A)
LNV  A 801 (-2.9A)
LNV  A 801 (-3.8A)
LNV  A 801 (-3.0A)
LNV  A 801 (-4.4A)
 0.46A 1l7gA-3tiaA:
64.9		 1l7gA-3tiaA:
41.65
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4b7j NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		11 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 179
ARG A 225
GLU A 228
GLU A 277
GLU A 278
ARG A 293
TYR A 402
 None
G39  A1470 (-3.7A)
G39  A1470 (-3.9A)
None
None
G39  A1470 (-4.4A)
None
G39  A1470 (-3.7A)
G39  A1470 (-4.2A)
G39  A1470 (-2.9A)
G39  A1470 (-4.5A)
 0.28A 1l7gA-4b7jA:
64.4		 1l7gA-4b7jA:
40.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4cpn NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		5 ASP A 148
ARG A 149
ILE A 220
ARG A 222
GLU A 225
 ZMR  A 700 (-3.3A)
ZMR  A 700 (-4.0A)
None
ZMR  A 700 (-3.8A)
ZMR  A 700 (-3.5A)
 1.28A 1l7gA-4cpnA:
54.1		 1l7gA-4cpnA:
28.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4cpn NEURAMINIDASE

(Influenza B
virus) 		PF00064
(Neur) 		12 LEU A 131
ASP A 148
ARG A 149
ARG A 153
TRP A 176
ILE A 220
ARG A 222
GLU A 225
GLU A 274
GLU A 275
ARG A 291
TYR A 408
 None
ZMR  A 700 (-3.3A)
ZMR  A 700 (-4.0A)
ZMR  A 700 (-4.2A)
None
None
ZMR  A 700 (-3.8A)
ZMR  A 700 (-3.5A)
ZMR  A 700 (-2.7A)
ZMR  A 700 (-3.4A)
ZMR  A 700 (-2.8A)
ZMR  A 700 (-4.6A)
 0.47A 1l7gA-4cpnA:
54.1		 1l7gA-4cpnA:
28.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4h53 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		10 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
 None
SLB  A 512 (-3.5A)
SLB  A 512 (-3.8A)
None
None
None
SLB  A 512 (-4.2A)
None
SLB  A 512 (-2.8A)
SLB  A 512 (-2.7A)
 0.48A 1l7gA-4h53A:
64.9		 1l7gA-4h53A:
48.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4h53 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		10 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 277
ARG A 292
 None
SLB  A 512 (-3.5A)
SLB  A 512 (-3.8A)
None
None
None
SLB  A 512 (-4.2A)
None
SLB  A 512 (-2.7A)
SLB  A 512 (-3.1A)
 0.22A 1l7gA-4h53A:
64.9		 1l7gA-4h53A:
48.98
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4hzz NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
G39  A 509 (-3.6A)
G39  A 509 (-3.9A)
None
None
G39  A 509 ( 4.1A)
G39  A 509 (-4.7A)
None
G39  A 509 ( 4.1A)
G39  A 509 ( 4.0A)
G39  A 509 (-2.8A)
G39  A 509 (-4.6A)
 0.21A 1l7gA-4hzzA:
63.1		 1l7gA-4hzzA:
48.22
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4mju NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		11 LEU A 134
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
27S  A 501 (-4.2A)
None
None
27S  A 501 ( 4.6A)
27S  A 501 (-4.3A)
27S  A 501 (-3.3A)
27S  A 501 ( 3.7A)
27S  A 501 (-3.4A)
27S  A 501 (-3.1A)
27S  A 501 (-4.6A)
 0.43A 1l7gA-4mjuA:
62.6		 1l7gA-4mjuA:
43.73
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4mju NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		9 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
 None
27S  A 501 (-3.2A)
27S  A 501 (-4.2A)
None
None
27S  A 501 ( 4.6A)
27S  A 501 (-4.3A)
27S  A 501 (-3.3A)
27S  A 501 ( 3.7A)
 0.70A 1l7gA-4mjuA:
62.6		 1l7gA-4mjuA:
43.73
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4qn3 NEURAMINIDASE

(Influenza A
virus) 		PF00064
(Neur) 		12 LEU A  52
ASP A  69
ARG A  70
ARG A  74
TRP A  97
ILE A 141
ARG A 143
GLU A 146
GLU A 195
GLU A 196
ARG A 211
TYR A 324
 None
 0.28A 1l7gA-4qn3A:
71.3		 1l7gA-4qn3A:
61.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4z7g SERINE/THREONINE-PRO
TEIN
KINASE/ENDORIBONUCLE
ASE IRE1

(Homo sapiens) 		PF00069
(Pkinase)
PF06479
(Ribonuc_2-5A) 		5 LEU A 950
ARG A 946
GLU A 949
GLU A 807
TYR A 961
 None
 1.33A 1l7gA-4z7gA:
undetectable		 1l7gA-4z7gA:
20.78
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5guj DNA PRIMASE

(Bacillus
subtilis) 		PF08275
(Toprim_N)
PF10410
(DnaB_bind)
PF13155
(Toprim_2) 		5 LEU A 174
ASP A 201
ILE A 191
ARG A 202
TYR A 128
 None
 1.28A 1l7gA-5gujA:
undetectable		 1l7gA-5gujA:
21.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5hlb PENICILLIN-BINDING
PROTEIN 1B

(Escherichia
coli) 		PF00905
(Transpeptidase)
PF00912
(Transgly)
PF14814
(UB2H) 		5 LEU A 128
ASP A 198
ARG A 156
GLU A 340
GLU A 341
 None
 1.49A 1l7gA-5hlbA:
undetectable		 1l7gA-5hlbA:
19.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5k6o B-GLUCOSIDASE

(metagenome) 		PF00933
(Glyco_hydro_3)
PF01915
(Glyco_hydro_3_C)
PF14310
(Fn3-like) 		5 LEU A 582
ASP A 532
ARG A 538
GLU A 600
ARG A 597
 None
GAL  A1000 (-3.1A)
GAL  A1000 (-4.4A)
None
GAL  A1000 (-3.1A)
 1.44A 1l7gA-5k6oA:
undetectable		 1l7gA-5k6oA:
18.70
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5mpd 26S PROTEASOME
REGULATORY SUBUNIT
RPN9

(Saccharomyces
cerevisiae) 		PF01399
(PCI) 		5 LEU O  11
ARG O  15
GLU O  30
GLU O  35
GLU O  34
 None
 1.13A 1l7gA-5mpdO:
undetectable		 1l7gA-5mpdO:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5wug BETA-GLUCOSIDASE

(Paenibacillus
barengoltzii) 		no annotation 5 LEU A 620
ASP A 570
ARG A 576
GLU A 638
ARG A 635
 None
 1.36A 1l7gA-5wugA:
undetectable		 1l7gA-5wugA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6br6 NEURAMINIDASE

(Influenza A
virus) 		no annotation 12 LEU A 134
ASP A 151
ARG A 152
ARG A 156
TRP A 178
ILE A 222
ARG A 224
GLU A 227
GLU A 276
GLU A 277
ARG A 292
TYR A 406
 None
E3M  A 511 (-2.9A)
E3M  A 511 (-3.8A)
None
None
E3M  A 511 ( 4.3A)
E3M  A 511 (-3.8A)
E3M  A 511 ( 4.8A)
E3M  A 511 (-2.3A)
E3M  A 511 ( 3.6A)
E3M  A 511 (-2.9A)
E3M  A 511 (-4.5A)
 0.49A 1l7gA-6br6A:
64.7		 1l7gA-6br6A:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6eks SIALIDASE

(Vibrio cholerae) 		no annotation 5 ASP A 276
TRP A 337
GLU A 645
ARG A 661
TYR A 766
 G39  A 908 (-3.3A)
None
G39  A 908 (-4.0A)
G39  A 908 (-2.8A)
G39  A 908 (-4.6A)
 0.58A 1l7gA-6eksA:
20.7		 1l7gA-6eksA:
17.48