DRUG BINDING INTERFACES MAPPED TO 'AGMATINE'

List of Binding Interfaces

(Click on the entry ID to view details of interfaces and pattern clusters)
(Note that ASSAM search use only 3-12 residue containing patterns)
Filter list by:
DrReposER ID PDB Ligand Organism Macromolecule Pfam Res. Interface HETATM
1AQ7_B_AG2B4 1aq7 AG2

DB08838
(Agmatine) 		Bos taurus;
Microcystis
aeruginosa 		AERUGINOSIN 98-B;
TRYPSIN 		PF00089
(Trypsin)
no annotation 		8 HIS A  57
ASP A 189
SER A 190
GLN A 192
SER A 195
VAL A 213
GLY A 216
GLY A 226
 AG2 B   4
1MT1_A_AG2A7005 1mt1 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		PF01862
(PvlArgDC)
no annotation 		6 LEU A  31
ASP A  35
LEU A  38
ILE F  54
GLU F 109
ARG F 134
 AG2 A7005
1MT1_B_AG2B7001 1mt1 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		PF01862
(PvlArgDC)
no annotation 		6 LEU C  31
ASP C  35
LEU C  38
ILE B  54
GLU B 109
ARG B 134
 AG2 B7001
1MT1_C_AG2C7004 1mt1 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 6 LEU E  31
ASP E  35
LEU E  38
ALA D  76
LEU D 106
GLU D 109
 AG2 C7004
1MT1_G_AG2G7003 1mt1 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 6 LEU G  31
ASP G  35
LEU G  38
GLY G  44
ILE J  54
ARG J 134
 AG2 G7003
1MT1_K_AG2K7002 1mt1 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 7 LEU K  31
ASP K  35
LEU K  38
GLY K  44
ILE H  54
GLU H 109
ARG H 134
 AG2 K7002
1N13_B_AG2B7011 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		PF01862
(PvlArgDC)
no annotation 		5 LEU C  31
ASP C  35
LEU C  38
GLU B 109
ARG B 134
 AG2 B7011
1N13_D_AG2D7015 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 7 LEU E  31
ASP E  35
LEU E  38
GLY E  44
LEU D 106
GLU D 109
ARG D 134
 AG2 D7015
1N13_F_AG2F7016 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		PF01862
(PvlArgDC)
no annotation 		8 LEU A  31
ASP A  35
LEU A  38
GLY A  44
ILE F  54
MET F 108
GLU F 109
ARG F 134
 AG2 F7016
1N13_H_AG2H7012 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 6 LEU K  31
ASP K  35
LEU K  38
GLY K  44
GLU H 109
ARG H 134
 AG2 H7012
1N13_J_AG2J7013 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 7 LEU G  31
ASP G  35
LEU G  38
GLY G  44
MET J 108
GLU J 109
ARG J 134
 AG2 J7013
1N13_L_AG2L7014 1n13 AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE ALPHA
CHAIN;
PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE BETA
CHAIN 		no annotation 7 LEU I  31
ASP I  35
LEU I  38
ILE L  54
MET L 108
GLU L 109
ARG L 134
 AG2 L7014
2QQC_A_AG2A671 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		PF01862
(PvlArgDC)
no annotation 		7 LEU C  31
ASP C  35
LEU C  38
ILE B  54
MET B 108
GLN B 109
ARG B 134
 AG2 A 671
2QQC_A_AG2A672 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		PF01862
(PvlArgDC)
no annotation 		7 LEU A  31
ASP A  35
LEU A  38
ILE F  54
MET F 108
GLN F 109
ARG F 134
 AG2 A 672
2QQC_E_AG2E671 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		no annotation 7 LEU E  31
ASP E  35
LEU E  38
GLY E  44
ILE D  54
GLN D 109
ARG D 134
 AG2 E 671
2QQC_I_AG2I671 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		no annotation 7 LEU G  31
ASP G  35
LEU G  38
ILE J  54
MET J 108
GLN J 109
ARG J 134
 AG2 I 671
2QQC_I_AG2I672 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		no annotation 7 LEU I  31
ASP I  35
LEU I  38
ILE L  54
MET L 108
GLN L 109
ARG L 134
 AG2 I 672
2QQC_K_AG2K671 2qqc AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		no annotation 8 LEU K  31
ASP K  35
LEU K  38
GLY K  44
ILE H  54
MET H 108
GLN H 109
ARG H 134
 AG2 K 671
2QQD_A_AG2A671 2qqd AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		PF01862
(PvlArgDC)
no annotation 		7 LEU A  31
ASP A  35
LEU A  38
ILE E  54
MET E 108
GLU E 109
ARG E 134
 AG2 A 671
2QQD_B_AG2B671 2qqd AG2

DB08838
(Agmatine) 		Methanocaldococcu
s jannaschii 		PYRUVOYL-DEPENDENT
ARGININE
DECARBOXYLASE (EC
4.1.1.19) (PVLARGDC) 		PF01862
(PvlArgDC) 		8 LEU C  31
ASP C  35
LEU C  38
GLY C  44
ILE B  54
MET B 108
GLU B 109
ARG B 134
 AG2 B 671
3AMU_A_AG2A422 3amu AG2

DB08838
(Agmatine) 		Archaeoglobus
fulgidus 		PUTATIVE
UNCHARACTERIZED
PROTEIN 		PF01336
(tRNA_anti-codon)
PF08489
(DUF1743) 		5 GLU A 159
ASN A 194
VAL A 203
CYS A 204
ARG A 217
 AG2 A 422
3AU7_A_AG2A7011 3au7 AG2

DB08838
(Agmatine) 		Archaeoglobus
fulgidus 		PUTATIVE
UNCHARACTERIZED
PROTEIN 		PF01336
(tRNA_anti-codon)
PF08489
(DUF1743) 		4 ASN A 194
VAL A 203
CYS A 204
ARG A 217
 AG2 A7011
3IQD_B_AG2B406 3iqd AG2

DB08838
(Agmatine) 		Pecten maximus OCTOPINE
DEHYDROGENASE 		PF02317
(Octopine_DH) 		4 GLU B 142
THR B 143
HIS B 212
TRP B 278
 AG2 B 406
3N2O_A_AG2A1002 3n2o AG2

DB08838
(Agmatine) 		Vibrio vulnificus BIOSYNTHETIC
ARGININE
DECARBOXYLASE 		PF02784
(Orn_Arg_deC_N)
no annotation 		9 LYS B 105
HIS B 255
GLY B 257
SER B 258
ASP B 480
TRP A 482
ASP A 512
SER A 513
LEU B 555
 AG2 A1002
3N2O_B_AG2B1002 3n2o AG2

DB08838
(Agmatine) 		Vibrio vulnificus BIOSYNTHETIC
ARGININE
DECARBOXYLASE 		PF02784
(Orn_Arg_deC_N)
no annotation 		9 LYS A 105
HIS A 255
GLY A 257
SER A 258
TRP B 482
ASP B 512
SER B 513
TYR A 551
LEU A 555
 AG2 B1002
3N2O_C_AG2C1002 3n2o AG2

DB08838
(Agmatine) 		Vibrio vulnificus BIOSYNTHETIC
ARGININE
DECARBOXYLASE 		no annotation 8 LYS C 105
HIS C 255
SER C 258
ASP C 480
TRP D 482
ASP D 512
ASP D 514
LEU C 555
 AG2 C1002
3N2O_D_AG2D1002 3n2o AG2

DB08838
(Agmatine) 		Vibrio vulnificus BIOSYNTHETIC
ARGININE
DECARBOXYLASE 		no annotation 10 LYS D 105
HIS D 255
GLY D 257
ARG D 346
ASP D 480
TRP C 482
ASP C 512
SER C 513
TYR D 551
LEU D 555
 AG2 D1002
4XQE_A_AG2A505 4xqe AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		PF03435
(Sacchrp_dh_NADP)
PF16653
(Sacchrp_dh_C) 		13 ALA A 161
ASN A 162
PRO A 163
GLU A 210
TRP A 229
GLU A 237
VAL A 294
SER A 296
TYR A 323
TYR A 325
ASP A 361
LEU A 363
THR A 396
 AG2 A 505
4XQE_A_AG2A506 4xqe AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		PF03435
(Sacchrp_dh_NADP)
PF16653
(Sacchrp_dh_C) 		6 ARG A 139
ARG A 146
ARG A 191
ASP A 304
VAL A 420
ASP A 424
 AG2 A 506
4XQE_B_AG2B504 4xqe AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 13 ALA B 161
ASN B 162
PRO B 163
GLU B 210
TRP B 229
GLU B 237
VAL B 294
SER B 296
TYR B 323
TYR B 325
ASP B 361
LEU B 363
THR B 396
 AG2 B 504
4XQE_B_AG2B505 4xqe AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 6 ARG B 139
ARG B 146
ARG B 191
ASP B 304
VAL B 420
ASP B 424
 AG2 B 505
4XQG_A_AG2A505 4xqg AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		PF03435
(Sacchrp_dh_NADP)
PF16653
(Sacchrp_dh_C) 		8 ARG A 139
ARG A 146
ARG A 191
ASP A 304
PHE A 305
VAL A 420
ASP A 423
ASP A 424
 AG2 A 505
4XQG_B_AG2B505 4xqg AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 8 ARG B 139
ARG B 146
ARG B 191
ASP B 304
PHE B 305
VAL B 420
ASP B 423
ASP B 424
 AG2 B 505
4XR4_B_AG2B510 4xr4 AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 4 LYS B 204
ARG B 251
SER B 465
ASP B 466
 AG2 B 510
4XR4_B_AG2B511 4xr4 AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 3 VAL B   6
PHE B  36
ARG B  38
 AG2 B 511
4XRG_A_AG2A502 4xrg AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		PF03435
(Sacchrp_dh_NADP)
PF16653
(Sacchrp_dh_C) 		12 ASN A 162
PRO A 163
GLU A 210
TRP A 229
GLU A 237
VAL A 294
SER A 296
TYR A 323
TYR A 325
ASP A 361
LEU A 363
THR A 396
 AG2 A 502
4XRG_B_AG2B502 4xrg AG2

DB08838
(Agmatine) 		Blastochloris
viridis 		HOMOSPERMIDINE
SYNTHASE 		no annotation 14 ALA B 161
ASN B 162
PRO B 163
GLU B 210
TRP B 229
GLU B 237
VAL B 294
SER B 296
GLU B 298
TYR B 323
TYR B 325
ASP B 361
LEU B 363
THR B 396
 AG2 B 502
4XZK_A_AG2A700 4xzk AG2

DB08838
(Agmatine) 		Vibrio splendidus PUTATIVE
NAD(+)--ARGININE
ADP-RIBOSYLTRANSFERA
SE VIS 		PF03496
(ADPrib_exo_Tox) 		7 SER A  68
TYR A  72
ARG A 117
SER A 142
PHE A 153
GLU A 189
GLU A 191
 AG2 A 700
5J4N_A_AG2A501 5j4n AG2

DB08838
(Agmatine) 		Escherichia coli ARGININE/AGMATINE
ANTIPORTER 		PF13520
(AA_permease_2) 		6 SER A  26
GLY A 100
ASN A 101
MET A 104
ILE A 205
TRP A 293
 AG2 A 501
5J4N_B_AG2B501 5j4n AG2

DB08838
(Agmatine) 		Escherichia coli ARGININE/AGMATINE
ANTIPORTER 		no annotation 6 ILE B  23
GLY B 100
ASN B 101
MET B 104
ILE B 205
TRP B 293
 AG2 B 501
6AGG_Z_AG2Z503 6agg AG2

DB08838
(Agmatine) 		Archaeoglobus
fulgidus 		TRNA(ILE2)
2-AGMATINYLCYTIDINE
SYNTHETASE TIAS 		PF01336
(tRNA_anti-codon)
PF08489
(DUF1743) 		5 GLU Z 159
ASN Z 194
VAL Z 203
CYS Z 204
ARG Z 217
 AG2 Z 503
6B2W_A_AG2A401 6b2w AG2

DB08838
(Agmatine) 		Campylobacter
jejuni 		PUTATIVE
PEPTIDYL-ARGININE
DEIMINASE FAMILY
PROTEIN 		no annotation 10 ASP A  77
TRP A  79
ASP A  82
TRP A 104
ASP A 195
THR A 196
HIS A 199
GLN A 309
ASN A 310
SER A 315
 AG2 A 401
6B2W_B_AG2B401 6b2w AG2

DB08838
(Agmatine) 		Campylobacter
jejuni 		PUTATIVE
PEPTIDYL-ARGININE
DEIMINASE FAMILY
PROTEIN 		no annotation 11 ASP B  24
ASP B  77
TRP B  79
ASP B  82
TRP B 104
PHE B 108
ASP B 195
THR B 196
HIS B 199
GLN B 309
SER B 315
 AG2 B 401