SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'YE1'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RL8_A_RITA9001_1
(PROTEASE RETROPEPSIN)
2pg8 DPGC
(Streptomyces
toyocaensis)
6 / 12 GLY A 327
ALA A 329
VAL A 345
GLY A 295
ALA A 320
ILE A 346
YE1  A 997 (-3.4A)
None
None
YE1  A 997 (-3.5A)
None
None
1.36A 1rl8A-2pg8A:
undetectable
1rl8A-2pg8A:
13.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N8X_A_NIMA701_1
(PROSTAGLANDIN G/H
SYNTHASE 1)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 ARG A 332
ILE A 259
GLY A 327
ALA A 328
LEU A 331
None
None
YE1  A 997 (-3.4A)
None
None
1.24A 3n8xA-2pg8A:
undetectable
3n8xA-2pg8A:
21.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NXU_A_RITA600_1
(CYTOCHROME P450 3A4)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 PHE A 412
ILE A 324
ALA A 319
ILE A 294
ALA A 233
None
OXY  A   3 (-3.9A)
OXY  A   3 (-3.2A)
YE1  A 997 ( 4.4A)
YE1  A 997 (-3.9A)
0.94A 3nxuA-2pg8A:
undetectable
3nxuA-2pg8A:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NXU_B_RITB600_1
(CYTOCHROME P450 3A4)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 PHE A 412
ILE A 324
ALA A 319
ILE A 294
ALA A 233
None
OXY  A   3 (-3.9A)
OXY  A   3 (-3.2A)
YE1  A 997 ( 4.4A)
YE1  A 997 (-3.9A)
0.92A 3nxuB-2pg8A:
undetectable
3nxuB-2pg8A:
20.98
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3S56_A_ROCA201_2
(PROTEASE)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 9 LEU A 240
GLY A 327
ILE A 325
ILE A 245
ILE A 235
None
YE1  A 997 (-3.4A)
None
None
YE1  A 997 (-3.3A)
1.12A 3s56B-2pg8A:
undetectable
3s56B-2pg8A:
14.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AC9_C_DXCC1475_0
(MJ0495-LIKE PROTEIN)
2pg8 DPGC
(Streptomyces
toyocaensis)
4 / 8 ILE A 245
ASP A 190
GLN A 299
GLY A 295
None
None
YE1  A 997 (-3.6A)
YE1  A 997 (-3.5A)
0.83A 4ac9C-2pg8A:
2.0
4ac9C-2pg8A:
21.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DJE_B_C2FB302_0
(5-METHYLTETRAHYDROFO
LATE CORRINOID/IRON
SULFUR PROTEIN
METHYLTRANSFERASE)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 GLU A 189
MET A 197
ASP A 190
ASP A 184
SER A 232
YE1  A 997 (-2.3A)
None
None
None
None
1.28A 4djeB-2pg8A:
undetectable
4djeB-2pg8A:
21.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKX_A_STRA601_1
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 ALA A 329
ILE A 235
GLY A 297
ALA A 298
ILE A 346
None
YE1  A 997 (-3.3A)
None
None
None
0.86A 4nkxA-2pg8A:
undetectable
4nkxA-2pg8A:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKX_C_STRC601_1
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 ALA A 329
ILE A 235
GLY A 297
ALA A 298
ILE A 346
None
YE1  A 997 (-3.3A)
None
None
None
0.80A 4nkxC-2pg8A:
undetectable
4nkxC-2pg8A:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4NKX_D_STRD601_1
(STEROID
17-ALPHA-HYDROXYLASE
/17,20 LYASE)
2pg8 DPGC
(Streptomyces
toyocaensis)
5 / 12 ALA A 329
ILE A 235
GLY A 297
ALA A 298
ILE A 346
None
YE1  A 997 (-3.3A)
None
None
None
0.81A 4nkxD-2pg8A:
undetectable
4nkxD-2pg8A:
22.60
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ODO_B_FK5B203_2
(PEPTIDYL-PROLYL
CIS-TRANS ISOMERASE
SLYD)
2pg8 DPGC
(Streptomyces
toyocaensis)
3 / 3 ALA A 287
GLN A 299
GLY A 327
None
YE1  A 997 (-3.6A)
YE1  A 997 (-3.4A)
0.62A 4odoC-2pg8A:
undetectable
4odoC-2pg8A:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R21_A_STRA601_1
(CYTOCHROME P450
FAMILY 17
POLYPEPTIDE 2)
2pg8 DPGC
(Streptomyces
toyocaensis)
4 / 6 ALA A 329
ILE A 235
GLY A 296
ILE A 346
None
YE1  A 997 (-3.3A)
YE1  A 997 (-3.6A)
None
0.74A 4r21A-2pg8A:
undetectable
4r21A-2pg8A:
23.78