SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'VDX'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AA5_B_STRB302_1
(MINERALOCORTICOID
RECEPTOR)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 LEU A 190
ASN A 194
LEU A 196
ALA A 197
SER A 236
 None
None
None
None
VDX  A 501 (-3.3A)
 1.17A 2aa5B-2zbzA:
undetectable		 2aa5B-2zbzA:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2NYR_B_SVRB401_4
(NAD-DEPENDENT
DEACETYLASE
SIRTUIN-5)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		4 / 5 ALA A 361
ALA A 291
ALA A 294
GLN A 358
 HEM  A 413 (-3.5A)
HEM  A 413 ( 3.7A)
VDX  A 501 ( 3.8A)
None
 0.73A 2nyrB-2zbzA:
undetectable		 2nyrB-2zbzA:
20.56
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_A_VD3A2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ASN A 194
LEU A 240
ILE A 243
ALA A 244
THR A 248
 None
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
 0.97A 3a50A-2zbzA:
47.1		 3a50A-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_A_VD3A2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ILE A  96
LEU A 240
ILE A 243
ALA A 244
THR A 248
 HEM  A 413 (-4.0A)
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
 0.54A 3a50A-2zbzA:
47.1		 3a50A-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_B_VD3B2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 11 ILE A  96
LEU A 180
LEU A 240
ILE A 243
THR A 248
 HEM  A 413 (-4.0A)
VDX  A 501 (-4.2A)
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.2A)
 0.72A 3a50B-2zbzA:
47.6		 3a50B-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_C_VD3C2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 11 ILE A  96
LEU A 180
LEU A 240
ILE A 243
THR A 248
 HEM  A 413 (-4.0A)
VDX  A 501 (-4.2A)
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.2A)
 0.66A 3a50C-2zbzA:
47.8		 3a50C-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_D_VD3D2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		6 / 12 ILE A  96
LEU A 180
ASN A 194
ILE A 243
ALA A 244
THR A 248
 HEM  A 413 (-4.0A)
VDX  A 501 (-4.2A)
None
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
 1.43A 3a50D-2zbzA:
47.7		 3a50D-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A50_E_VD3E2001_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		6 / 12 ILE A  96
LEU A 180
ASN A 194
LEU A 240
ILE A 243
THR A 248
 HEM  A 413 (-4.0A)
VDX  A 501 (-4.2A)
None
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.2A)
 1.37A 3a50E-2zbzA:
47.7		 3a50E-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A51_D_VDYD6178_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ILE A  96
ASN A 194
LEU A 240
ILE A 243
THR A 248
 HEM  A 413 (-4.0A)
None
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.2A)
 1.12A 3a51D-2zbzA:
47.7		 3a51D-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3A51_E_VDYE6178_1
(VITAMIN D
HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ILE A  96
ASN A 194
ILE A 243
ALA A 244
THR A 248
 HEM  A 413 (-4.0A)
None
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
 1.07A 3a51E-2zbzA:
47.7		 3a51E-2zbzA:
37.88
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3CV9_A_VDXA501_1
(CYTOCHROME P450-SU1)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		6 / 9 LEU A 180
ARG A 193
SER A 236
ILE A 243
ILE A 293
GLY A 295
 VDX  A 501 (-4.2A)
VDX  A 501 (-3.5A)
VDX  A 501 (-3.3A)
VDX  A 501 (-4.2A)
VDX  A 501 (-4.9A)
HEM  A 413 ( 4.4A)
 1.10A 3cv9A-2zbzA:
70.2		 3cv9A-2zbzA:
99.76
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3CV9_A_VDXA501_1
(CYTOCHROME P450-SU1)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		9 / 9 THR A  81
VAL A  88
SER A  91
LEU A 180
ARG A 193
SER A 236
ILE A 243
ILE A 293
GLY A 296
 VDX  A 501 (-4.4A)
VDX  A 501 ( 4.4A)
VDX  A 501 (-4.3A)
VDX  A 501 (-4.2A)
VDX  A 501 (-3.5A)
VDX  A 501 (-3.3A)
VDX  A 501 (-4.2A)
VDX  A 501 (-4.9A)
None
 0.39A 3cv9A-2zbzA:
70.2		 3cv9A-2zbzA:
99.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3LW5_B_PQNB5002_1
(PHOTOSYSTEM I P700
CHLOROPHYLL A
APOPROTEIN A2)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 10 ILE A 159
ARG A 193
ALA A 197
LEU A 196
ALA A 176
 None
VDX  A 501 (-3.5A)
None
None
None
 1.27A 3lw5B-2zbzA:
undetectable		 3lw5B-2zbzA:
19.05
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MDR_B_GJZB506_1
(CHOLESTEROL
24-HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		4 / 6 ILE A 243
ALA A 244
THR A 248
ALA A 291
 VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
HEM  A 413 ( 3.7A)
 0.77A 3mdrB-2zbzA:
33.3		 3mdrB-2zbzA:
27.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MDV_B_CL6B506_1
(CHOLESTEROL
24-HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ILE A 243
ALA A 244
GLU A 247
THR A 248
ALA A 291
 VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
None
HEM  A 413 (-3.2A)
HEM  A 413 ( 3.7A)
 0.96A 3mdvB-2zbzA:
33.5		 3mdvB-2zbzA:
27.10
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3R9C_A_ECLA451_1
(CYTOCHROME P450
164A2)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 10 LEU A 180
LEU A 240
ILE A 243
ALA A 244
THR A 248
 VDX  A 501 (-4.2A)
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
HEM  A 413 (-3.2A)
 0.67A 3r9cA-2zbzA:
41.9		 3r9cA-2zbzA:
35.44
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3VRM_A_VD3A502_1
(VITAMIN D(3)
25-HYDROXYLASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		5 / 12 ILE A  96
LEU A 180
LEU A 240
ILE A 243
ALA A 244
 HEM  A 413 (-4.0A)
VDX  A 501 (-4.2A)
HEM  A 413 ( 4.5A)
VDX  A 501 (-4.2A)
HEM  A 413 (-3.5A)
 0.63A 3vrmA-2zbzA:
47.7		 3vrmA-2zbzA:
37.94
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4X5I_A_FOLA201_1
(DIHYDROFOLATE
REDUCTASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		3 / 3 ASP A 292
ARG A  73
ARG A 297
 None
VDX  A 501 ( 4.2A)
HEM  A 413 (-3.0A)
 0.98A 4x5iA-2zbzA:
undetectable		 4x5iA-2zbzA:
17.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5EAJ_B_FOLB201_1
(DIHYDROFOLATE
REDUCTASE)		 2zbz CYTOCHROME P450-SU1
(Streptomyces
griseolus) 		3 / 3 ASP A 292
ARG A  73
ARG A 297
 None
VDX  A 501 ( 4.2A)
HEM  A 413 (-3.0A)
 0.99A 5eajB-2zbzA:
undetectable		 5eajB-2zbzA:
17.84