SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'UP3'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_A_CHDA200_0
(ILEAL BILE
ACID-BINDING PROTEIN)		 3d8n UROPORPHYRINOGEN-III
SYNTHASE
(Thermus
thermophilus) 		4 / 5 PRO A  37
THR A  59
VAL A  61
GLY A  62
 None
UP3  A 944 (-4.2A)
UP3  A 944 ( 3.8A)
None
 1.01A 3elzA-3d8nA:
undetectable		 3elzA-3d8nA:
16.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TNE_A_RITA401_2
(SECRETED ASPARTIC
PROTEASE)		 3d8n UROPORPHYRINOGEN-III
SYNTHASE
(Thermus
thermophilus) 		4 / 6 SER A 114
VAL A 216
THR A  58
THR A  59
 None
None
None
UP3  A 944 (-4.2A)
 1.11A 3tneA-3d8nA:
undetectable		 3tneA-3d8nA:
21.05