SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'UBD'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NWV_A_ACAA18_2
(SCRFP-TAG,GP41)		 4j7m PROTEIN DOM3Z
(Mus
musculus) 		4 / 7 GLN A  32
LEU A  35
ALA A 332
LEU A 335
 UBD  A 401 (-3.0A)
None
None
None
 0.97A 5nwvA-4j7mA:
undetectable		 5nwvA-4j7mA:
8.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ODQ_D_ACTD202_0
(METHYL-VIOLOGEN
REDUCING
HYDROGENASE, SUBUNIT
D)		 4j7m PROTEIN DOM3Z
(Mus
musculus) 		3 / 3 HIS A 113
GLU A 112
TRP A 109
 None
UBD  A 402 (-4.7A)
None
 1.04A 5odqD-4j7mA:
undetectable		 5odqD-4j7mA:
14.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5ODR_D_ACTD202_0
(METHYL-VIOLOGEN
REDUCING
HYDROGENASE, SUBUNIT
D)		 4j7m PROTEIN DOM3Z
(Mus
musculus) 		3 / 3 HIS A 113
GLU A 112
TRP A 109
 None
UBD  A 402 (-4.7A)
None
 0.96A 5odrD-4j7mA:
undetectable		 5odrD-4j7mA:
14.02