SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'THJ'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_A_FFOA1002_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.96A 1dfoA-3s4oA:
undetectable
1dfoA-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_B_FFOB2002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.96A 1dfoB-3s4oA:
undetectable
1dfoB-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_C_FFOC3002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.95A 1dfoC-3s4oA:
undetectable
1dfoC-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1DFO_D_FFOD4002_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.96A 1dfoD-3s4oA:
undetectable
1dfoD-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_A_FFOA1293_0
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.96A 1eqbA-3s4oA:
undetectable
1eqbA-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_B_FFOB2293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.96A 1eqbB-3s4oA:
undetectable
1eqbB-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_C_FFOC3293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.95A 1eqbC-3s4oA:
undetectable
1eqbC-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1EQB_D_FFOD4293_1
(SERINE
HYDROXYMETHYLTRANSFE
RASE)
3s4o PROTEIN TYROSINE
PHOSPHATASE-LIKE
PROTEIN

(Leishmania
major)
5 / 12 LEU A  47
VAL A  60
ALA A 119
SER A  28
PRO A  27
None
None
THJ  A 170 (-3.7A)
None
None
0.95A 1eqbD-3s4oA:
undetectable
1eqbD-3s4oA:
18.69
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1QAO_A_SAMA245_0
(ERMC'
METHYLTRANSFERASE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ILE A  34
ASP A  35
ASP A  55
THJ  A 249 (-3.4A)
None
THJ  A 249 (-4.5A)
None
None
0.65A 1qaoA-3gedA:
5.6
1qaoA-3gedA:
19.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
1cqd PROTEIN (PROTEASE
II)

(Zingiber
officinale)
7 / 10 GLN A  21
GLY A  25
SER A  26
PHE A  30
SER A  31
ALA A 162
GLY A  67
THJ  A 800 (-3.2A)
THJ  A 800 (-3.1A)
None
None
None
None
THJ  A 800 ( 4.6A)
1.17A 1stfE-1cqdA:
37.6
1stfI-1cqdA:
0.9
1stfE-1cqdA:
48.20
1stfI-1cqdA:
19.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
1cqd PROTEIN (PROTEASE
II)

(Zingiber
officinale)
8 / 10 GLN A  21
GLY A  25
SER A  26
TRP A  28
PHE A  30
SER A  31
HIS A 161
ALA A 162
THJ  A 800 (-3.2A)
THJ  A 800 (-3.1A)
None
None
None
None
THJ  A 800 ( 3.9A)
None
0.33A 1stfE-1cqdA:
37.6
1stfI-1cqdA:
0.9
1stfE-1cqdA:
48.20
1stfI-1cqdA:
19.35
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
1iwd ERVATAMIN B
(Tabernaemontana
divaricata)
6 / 10 GLN A  19
GLY A  23
SER A  24
PHE A  28
SER A  29
GLY A  65
THJ  A 601 (-3.6A)
THJ  A 601 (-3.0A)
None
None
None
THJ  A 601 (-3.6A)
1.15A 1stfE-1iwdA:
37.1
1stfI-1iwdA:
undetectable
1stfE-1iwdA:
48.18
1stfI-1iwdA:
17.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
1iwd ERVATAMIN B
(Tabernaemontana
divaricata)
7 / 10 GLN A  19
GLY A  23
SER A  24
TRP A  26
PHE A  28
SER A  29
HIS A 158
THJ  A 601 (-3.6A)
THJ  A 601 (-3.0A)
None
None
None
None
THJ  A 601 (-4.6A)
0.19A 1stfE-1iwdA:
37.1
1stfI-1iwdA:
undetectable
1stfE-1iwdA:
48.18
1stfI-1iwdA:
17.67
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
1o0e ERVATAMIN C
(Tabernaemontana
divaricata)
7 / 10 GLN A  19
GLY A  23
SER A  24
TRP A  26
PHE A  28
SER A  29
HIS A 157
THJ  A 601 ( 3.8A)
THJ  A 601 (-2.9A)
None
None
None
None
THJ  A 601 (-3.8A)
0.52A 1stfE-1o0eA:
25.6
1stfI-1o0eA:
undetectable
1stfE-1o0eA:
49.77
1stfI-1o0eA:
18.18
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
2pns ERVATAMIN-C, A
PAPAIN-LIKE PLANT
CYSTEINE PROTEASE

(Tabernaemontana
divaricata)
7 / 10 GLN A  19
GLY A  23
SER A  24
TRP A  26
PHE A  28
SER A  29
HIS A 157
THJ  A 601 (-2.1A)
THJ  A 601 (-2.5A)
None
THJ  A 601 (-4.8A)
None
None
THJ  A 601 ( 4.7A)
0.49A 1stfE-2pnsA:
24.5
1stfI-2pnsA:
undetectable
1stfE-2pnsA:
49.31
1stfI-2pnsA:
17.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q6O_A_SAMA500_0
(HYPOTHETICAL PROTEIN)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
4 / 7 VAL A 105
ALA A  83
PRO A  59
THR A  61
None
THJ  A 249 ( 4.1A)
None
None
1.07A 2q6oA-3gedA:
undetectable
2q6oA-3gedA:
22.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QE6_A_SAMA400_0
(UNCHARACTERIZED
PROTEIN TFU_2867)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ILE A  34
ASP A  55
VAL A  56
THJ  A 249 (-3.4A)
None
THJ  A 249 (-4.5A)
None
None
0.79A 2qe6A-3gedA:
6.8
2qe6A-3gedA:
23.33
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AI8_A_HNQA255_1
(CATHEPSIN B)
1cqd PROTEIN (PROTEASE
II)

(Zingiber
officinale)
4 / 7 GLN A  21
GLY A  25
HIS A 161
TRP A 183
THJ  A 800 (-3.2A)
THJ  A 800 (-3.1A)
THJ  A 800 ( 3.9A)
None
0.37A 3ai8A-1cqdA:
27.5
3ai8A-1cqdA:
31.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_A_HNQA255_1
(CATHEPSIN B)
1iwd ERVATAMIN B
(Tabernaemontana
divaricata)
4 / 7 GLN A  19
GLY A  23
HIS A 158
TRP A 180
THJ  A 601 (-3.6A)
THJ  A 601 (-3.0A)
THJ  A 601 (-4.6A)
None
0.48A 3ai8A-1iwdA:
27.0
3ai8A-1iwdA:
27.97
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_A_HNQA255_1
(CATHEPSIN B)
1o0e ERVATAMIN C
(Tabernaemontana
divaricata)
4 / 7 GLN A  19
GLY A  23
HIS A 157
TRP A 175
THJ  A 601 ( 3.8A)
THJ  A 601 (-2.9A)
THJ  A 601 (-3.8A)
None
0.35A 3ai8A-1o0eA:
26.4
3ai8A-1o0eA:
28.68
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_A_HNQA255_1
(CATHEPSIN B)
2pns ERVATAMIN-C, A
PAPAIN-LIKE PLANT
CYSTEINE PROTEASE

(Tabernaemontana
divaricata)
4 / 7 GLN A  19
GLY A  23
HIS A 157
TRP A 175
THJ  A 601 (-2.1A)
THJ  A 601 (-2.5A)
THJ  A 601 ( 4.7A)
None
0.47A 3ai8A-2pnsA:
26.4
3ai8A-2pnsA:
28.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AY0_B_ADNB402_1
(UNCHARACTERIZED
PROTEIN MJ0883)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 10 GLY A  10
ASP A  33
ILE A  34
ASP A  55
VAL A  56
None
None
THJ  A 249 (-4.5A)
None
None
0.95A 3ay0B-3gedA:
6.5
3ay0B-3gedA:
22.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AY0_B_ADNB402_1
(UNCHARACTERIZED
PROTEIN MJ0883)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 10 GLY A  11
ASP A  33
ILE A  34
ASP A  55
VAL A  56
None
None
THJ  A 249 (-4.5A)
None
None
0.72A 3ay0B-3gedA:
6.5
3ay0B-3gedA:
22.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CCF_A_BEZA261_0
(CYCLOPROPANE-FATTY-A
CYL-PHOSPHOLIPID
SYNTHASE)
2pns ERVATAMIN-C, A
PAPAIN-LIKE PLANT
CYSTEINE PROTEASE

(Tabernaemontana
divaricata)
4 / 8 HIS A  61
GLY A  66
ASN A  60
TYR A  70
None
THJ  A 601 (-4.5A)
None
None
1.25A 3ccfA-2pnsA:
undetectable
3ccfA-2pnsA:
20.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DMF_A_SAMA388_0
(PROBABLE RIBOSOMAL
RNA SMALL SUBUNIT
METHYLTRANSFERASE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ASP A  55
VAL A  56
VAL A 105
THJ  A 249 (-3.4A)
None
None
None
None
1.12A 3dmfA-3gedA:
7.6
3dmfA-3gedA:
20.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IV8_A_SAMA301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ASP A  33
ILE A  34
ASP A  55
THJ  A 249 (-3.4A)
None
None
THJ  A 249 (-4.5A)
None
0.49A 4iv8A-3gedA:
7.2
4iv8A-3gedA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IV8_B_SAMB301_0
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ASP A  33
ILE A  34
ASP A  55
THJ  A 249 (-3.4A)
None
None
THJ  A 249 (-4.5A)
None
0.49A 4iv8B-3gedA:
7.2
4iv8B-3gedA:
23.38
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4KIC_A_SAMA401_0
(METHYLTRANSFERASE
MPPJ)
1cqd PROTEIN (PROTEASE
II)

(Zingiber
officinale)
5 / 12 GLY A  64
GLY A  25
ARG A  66
ALA A  29
ASP A  57
None
THJ  A 800 (-3.1A)
None
None
None
1.09A 4kicA-1cqdA:
undetectable
4kicA-1cqdA:
19.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEN_B_VDYB201_2
(CDL2.2)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 LEU A  62
PHE A  65
LEU A 113
ILE A 129
ALA A  83
None
None
None
None
THJ  A 249 ( 4.1A)
1.19A 5ienB-3gedA:
undetectable
5ienB-3gedA:
20.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WY0_A_SAMA800_0
(SMALL RNA
2'-O-METHYLTRANSFERA
SE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ASP A  33
ILE A  34
ILE A  14
THJ  A 249 (-3.4A)
None
None
THJ  A 249 (-4.5A)
None
0.73A 5wy0A-3gedA:
2.4
5wy0A-3gedA:
21.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WY0_A_SAMA800_0
(SMALL RNA
2'-O-METHYLTRANSFERA
SE)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
GLY A  11
ASP A  33
ILE A  34
VAL A  56
THJ  A 249 (-3.4A)
None
None
THJ  A 249 (-4.5A)
None
0.73A 5wy0A-3gedA:
2.4
5wy0A-3gedA:
21.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQ4_A_ADNA401_1
(THERMOSPERMINE
SYNTHASE ACAULIS
PROTEIN)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
ASP A  33
ILE A  34
ASP A  35
ASP A  55
THJ  A 249 (-3.4A)
None
THJ  A 249 (-4.5A)
None
None
0.59A 6bq4A-3gedA:
6.3
6bq4A-3gedA:
15.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6BQ4_B_ADNB401_1
(THERMOSPERMINE
SYNTHASE ACAULIS
PROTEIN)
3ged SHORT-CHAIN
DEHYDROGENASE/REDUCT
ASE SDR

(Ruminiclostridiu
m
thermocellum)
5 / 12 GLY A   9
ASP A  33
ILE A  34
ASP A  35
ASP A  55
THJ  A 249 (-3.4A)
None
THJ  A 249 (-4.5A)
None
None
0.53A 6bq4B-3gedA:
6.9
6bq4B-3gedA:
15.79