SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'TDM'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JFF_B_TA1B601_1
(TUBULIN BETA CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 1jffB-3e9yA:
undetectable		 1jffB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HXF_B_TA1B601_1
(TUBULIN BETA CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 2hxfB-3e9yA:
undetectable		 2hxfB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2HXH_B_TA1B601_1
(TUBULIN BETA CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 2hxhB-3e9yA:
undetectable		 2hxhB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2P4N_B_TA1B601_1
(TUBULIN BETA CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 2p4nB-3e9yA:
undetectable		 2p4nB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WBE_B_TA1B1439_1
(TUBULIN BETA-2B
CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 2wbeB-3e9yA:
undetectable		 2wbeB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DCO_B_TA1B601_1
(BOVINE BETA TUBULIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 3dcoB-3e9yA:
undetectable		 3dcoB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3EDL_B_TA1B601_1
(BETA TUBULIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 3edlB-3e9yA:
undetectable		 3edlB-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HUO_A_PNNA303_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		4 / 4 GLN A 573
GLN A 487
GLY A 486
HIS A 488
 None
TDM  A 700 (-4.9A)
TDM  A 700 (-3.4A)
TDM  A 700 (-4.1A)
 1.10A 3huoA-3e9yA:
undetectable		 3huoA-3e9yA:
19.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3IZ0_B_TA1B820_1
(BETA TUBULIN, CHAIN
B FROM PDB 1JFF)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.12A 3iz0B-3e9yA:
undetectable		 3iz0B-3e9yA:
22.50
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IGJ_A_CTYA402_2
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		4 / 5 HIS A 352
LEU A 568
TYR A 579
PHE A 578
 None
TDM  A 700 (-3.8A)
None
None
 1.43A 5igjA-3e9yA:
undetectable		 5igjA-3e9yA:
19.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5OGC_B_TA1B601_1
(TUBULIN BETA CHAIN)		 3e9y ACETOLACTATE
SYNTHASE,
CHLOROPLASTIC
(Arabidopsis
thaliana) 		5 / 12 VAL A 533
ASP A 534
LEU A 621
ARG A 614
GLY A 537
 None
None
None
None
TDM  A 700 (-3.6A)
 1.11A 5ogcB-3e9yA:
undetectable		 5ogcB-3e9yA:
22.50