SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'TCD'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FXV_B_PNNB1001_0
(PENICILLIN ACYLASE)		 1xls ORPHAN NUCLEAR
RECEPTOR NR1I3
(Mus
musculus) 		4 / 7 SER E 251
SER E 337
ALA E 335
PHE E 248
 None
None
None
TCD  E 805 (-4.3A)
 1.16A 1fxvA-1xlsE:
undetectable
1fxvB-1xlsE:
undetectable		 1fxvA-1xlsE:
24.50
1fxvB-1xlsE:
15.79
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AZQ_A_PCFA954_0
(CATECHOL
1,2-DIOXYGENASE)		 1xls ORPHAN NUCLEAR
RECEPTOR NR1I3
(Mus
musculus) 		5 / 9 LEU E 253
GLU E 237
HIS E 241
ALA E 239
LEU E 151
 None
None
None
TCD  E 805 ( 4.0A)
None
 1.22A 2azqA-1xlsE:
undetectable		 2azqA-1xlsE:
23.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEP_A_VDYA201_2
(CDL2.3B)		 1xls ORPHAN NUCLEAR
RECEPTOR NR1I3
(Mus
musculus) 		5 / 9 ILE E 332
VAL E 179
LEU E 353
ILE E 356
LEU E 249
 None
None
TCD  E 805 (-4.2A)
None
None
 1.08A 5iepA-1xlsE:
0.7		 5iepA-1xlsE:
19.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5MM4_B_TA1B501_1
(TUBULIN BETA CHAIN)		 1xls ORPHAN NUCLEAR
RECEPTOR NR1I3
(Mus
musculus) 		5 / 10 LEU E 253
ALA E 242
PHE E 171
PRO E 148
LEU E 151
 None
None
TCD  E 805 ( 4.7A)
None
None
 1.32A 5mm4B-1xlsE:
undetectable		 5mm4B-1xlsE:
13.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NWV_A_ACAA18_2
(SCRFP-TAG,GP41)		 1xls ORPHAN NUCLEAR
RECEPTOR NR1I3
(Mus
musculus) 		4 / 7 GLN E 144
ASP E 173
ALA E 172
LEU E 353
 None
None
TCD  E 805 ( 4.3A)
TCD  E 805 (-4.2A)
 1.05A 5nwvA-1xlsE:
undetectable		 5nwvA-1xlsE:
10.08