SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SPH'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0P_A_TE4A201_1
(BETA-LACTOGLOBULIN)
5osn CAPSID PROTEIN
(Enterovirus
E)
5 / 12 ILE A  90
VAL A 175
VAL A 173
PHE A 114
MET A 112
SPH  A 301 (-4.1A)
SPH  A 301 (-4.9A)
None
SPH  A 301 ( 4.2A)
SPH  A 301 ( 4.2A)
1.02A 4y0pA-5osnA:
undetectable
4y0pA-5osnA:
18.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y0R_A_PX9A201_0
(BETA-LACTOGLOBULIN)
5osn CAPSID PROTEIN
(Enterovirus
E)
5 / 12 LEU A 213
ILE A  90
VAL A 175
PHE A 114
MET A 112
SPH  A 301 (-4.6A)
SPH  A 301 (-4.1A)
SPH  A 301 (-4.9A)
SPH  A 301 ( 4.2A)
SPH  A 301 ( 4.2A)
0.99A 4y0rA-5osnA:
undetectable
4y0rA-5osnA:
18.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5NR3_A_95EA401_0
(DNA
(CYTOSINE-5)-METHYLT
RANSFERASE 3B)
3epc PROTEIN VP1
(Enterovirus
C)
4 / 7 ILE 1 110
PHE 1 237
LYS 1 113
SER 1 128
SPH  1   0 (-4.5A)
SPH  1   0 ( 3.1A)
None
None
1.37A 5nr3A-3epc1:
undetectable
5nr3A-3epc1:
18.73