SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SNN'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA350_2
(PROTEIN (ADENOSINE
KINASE))
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
3 / 3 LEU A 183
SER A 175
ASN A  72
None
SNN  A 176 ( 3.4A)
CIT  A 502 (-3.8A)
0.82A 1bx4A-5nijA:
3.0
1bx4A-5nijA:
13.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA350_2
(PROTEIN (ADENOSINE
KINASE))
5obt VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
3 / 3 LEU A 183
SER A 175
ASN A  72
None
SNN  A 176 ( 3.2A)
None
0.80A 1bx4A-5obtA:
3.1
1bx4A-5obtA:
13.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1BX4_A_ADNA350_2
(PROTEIN (ADENOSINE
KINASE))
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
3 / 3 LEU A 184
SER A 176
ASN A  73
None
SNN  A 177 ( 3.5A)
None
0.78A 1bx4A-6aztA:
2.9
1bx4A-6aztA:
13.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1OT7_B_IU5B1002_1
(BILE ACID RECEPTOR)
1wl8 GMP SYNTHASE
[GLUTAMINE-HYDROLYZI
NG] SUBUNIT A

(Pyrococcus
horikoshii)
5 / 12 LEU A 118
ILE A 106
PHE A 165
ILE A 178
TYR A 161
None
None
None
None
SNN  A 112 ( 4.4A)
1.46A 1ot7B-1wl8A:
0.0
1ot7B-1wl8A:
22.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1PXX_C_DIFC2701_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
5 / 12 VAL A 141
LEU A 144
SER A 145
LEU A 217
TYR A 175
None
None
None
None
SNN  A 177 ( 4.3A)
1.00A 1pxxC-6aztA:
undetectable
1pxxC-6aztA:
8.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1S19_A_MC9A500_1
(VITAMIN D3 RECEPTOR)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
4 / 5 TYR A 316
SER A 242
HIS A 178
HIS A  76
None
None
SNN  A 177 (-3.6A)
SNN  A 177 ( 3.3A)
1.40A 1s19A-6aztA:
undetectable
1s19A-6aztA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VHW_A_ADNA252_1
(PURINE NUCLEOSIDE
PHOSPHORYLASE)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 11 SER A 221
GLY A 179
VAL A 182
ILE A 450
HIS A  75
None
None
None
None
SNN  A 176 ( 3.3A)
1.16A 1vhwA-5nijA:
undetectable
1vhwD-5nijA:
undetectable
1vhwA-5nijA:
14.57
1vhwD-5nijA:
14.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VHW_C_ADNC252_1
(PURINE NUCLEOSIDE
PHOSPHORYLASE)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 11 SER A 221
GLY A 179
VAL A 182
ILE A 450
HIS A  75
None
None
None
None
SNN  A 176 ( 3.3A)
1.20A 1vhwC-5nijA:
undetectable
1vhwE-5nijA:
undetectable
1vhwC-5nijA:
14.57
1vhwE-5nijA:
14.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VHW_D_ADND252_1
(PURINE NUCLEOSIDE
PHOSPHORYLASE)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 11 HIS A  75
SER A 221
GLY A 179
VAL A 182
ILE A 450
SNN  A 176 ( 3.3A)
None
None
None
None
1.21A 1vhwA-5nijA:
undetectable
1vhwD-5nijA:
undetectable
1vhwA-5nijA:
14.57
1vhwD-5nijA:
14.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1VHW_E_ADNE252_1
(PURINE NUCLEOSIDE
PHOSPHORYLASE)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 11 HIS A  75
SER A 221
GLY A 179
VAL A 182
ILE A 450
SNN  A 176 ( 3.3A)
None
None
None
None
1.16A 1vhwC-5nijA:
undetectable
1vhwE-5nijA:
undetectable
1vhwC-5nijA:
14.57
1vhwE-5nijA:
14.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2BM9_F_SAMF301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
6 / 12 GLY A 185
GLY A  70
ASP A 104
ASN A  73
HIS A  76
ALA A  78
SNN  A 177 ( 3.2A)
None
None
None
SNN  A 177 ( 3.3A)
None
1.41A 2bm9F-6aztA:
undetectable
2bm9F-6aztA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2I30_A_SALA1100_1
(SERUM ALBUMIN)
6dhi -
(-)
4 / 6 HIS A 165
TYR A 350
GLY A  56
LYS A  55
SNN  A 164 ( 3.8A)
None
None
None
1.45A 2i30A-6dhiA:
undetectable
2i30A-6dhiA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2LBD_A_REAA500_1
(RETINOIC ACID
RECEPTOR GAMMA)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 12 PHE A 214
LEU A 191
ILE A 224
PHE A 225
GLY A  66
None
None
None
None
SNN  A 176 ( 3.7A)
1.21A 2lbdA-5nijA:
undetectable
2lbdA-5nijA:
14.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QBN_A_CAMA442_0
(CYTOCHROME P450-CAM)
4d3y LEGUMAIN
(Cricetulus
griseus)
4 / 7 TYR A 149
THR A 151
VAL A 240
VAL A 100
None
SNN  A 152 ( 3.8A)
None
None
1.00A 2qbnA-4d3yA:
undetectable
2qbnA-4d3yA:
19.87
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2ZTH_A_SAMA305_1
(CATECHOL
O-METHYLTRANSFERASE)
4dx3 MANDELATE RACEMASE /
MUCONATE LACTONIZING
ENZYME FAMILY
PROTEIN

(Agrobacterium
fabrum)
3 / 3 SER A 329
GLU A 343
ASP A 291
None
SNN  A 319 ( 3.8A)
None
0.82A 2zthA-4dx3A:
undetectable
2zthA-4dx3A:
22.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AXZ_A_ADNA401_1
(TRNA
(GUANINE-N(1)-)-METH
YLTRANSFERASE)
1wl8 GMP SYNTHASE
[GLUTAMINE-HYDROLYZI
NG] SUBUNIT A

(Pyrococcus
horikoshii)
5 / 12 PRO A 167
GLY A  81
GLY A  51
ILE A 114
GLY A  77
None
None
CL  A1202 ( 3.7A)
SNN  A 112 ( 4.2A)
None
1.04A 3axzA-1wl8A:
undetectable
3axzA-1wl8A:
23.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BWY_A_SAMA301_1
(COMT PROTEIN)
4dx3 MANDELATE RACEMASE /
MUCONATE LACTONIZING
ENZYME FAMILY
PROTEIN

(Agrobacterium
fabrum)
3 / 3 SER A 329
GLU A 343
ASP A 291
None
SNN  A 319 ( 3.8A)
None
0.84A 3bwyA-4dx3A:
undetectable
3bwyA-4dx3A:
21.23
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3C0Z_B_SHHB301_1
(HISTONE DEACETYLASE
7A)
5lub LEGUMAIN
(Homo
sapiens)
4 / 8 ASP B  48
HIS B  45
ASP B 231
GLY B 230
None
SNN  B 147 (-3.3A)
3Y7  B 304 (-3.7A)
None
0.92A 3c0zB-5lubB:
undetectable
3c0zB-5lubB:
19.22
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3JZJ_A_ACRA405_1
(ACARBOSE/MALTOSE
BINDING PROTEIN GACH)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 12 GLU A 220
GLY A 249
ALA A  65
ASP A 358
GLY A 184
None
None
None
CIT  A 502 (-3.6A)
SNN  A 176 ( 3.5A)
0.84A 3jzjA-5nijA:
undetectable
3jzjA-5nijA:
12.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KKZ_B_SAMB302_0
(UNCHARACTERIZED
PROTEIN Q5LES9)
5obt VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 12 GLY A 222
GLY A 178
LEU A 191
SER A  67
ALA A 218
None
None
None
SNN  A 176 ( 4.0A)
SNN  A 176 ( 3.7A)
1.08A 3kkzB-5obtA:
2.7
3kkzB-5obtA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RET_A_SALA201_1
(SALICYLATE
BIOSYNTHESIS PROTEIN
PCHB)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 10 VAL A  64
ALA A  61
TYR A 174
ILE A 172
ILE A  79
None
None
SNN  A 176 ( 4.4A)
None
None
1.21A 3retA-5nijA:
undetectable
3retB-5nijA:
undetectable
3retA-5nijA:
15.84
3retB-5nijA:
15.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ARC_A_LEUA1001_0
(LEUCINE--TRNA LIGASE)
4dx3 MANDELATE RACEMASE /
MUCONATE LACTONIZING
ENZYME FAMILY
PROTEIN

(Agrobacterium
fabrum)
4 / 7 ASP A 243
SER A 265
TYR A 118
HIS A 318
None
None
None
SNN  A 319 ( 3.0A)
1.37A 4arcA-4dx3A:
1.3
4arcA-4dx3A:
18.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DX7_B_DM2B1104_1
(ACRIFLAVINE
RESISTANCE PROTEIN B)
1wl8 GMP SYNTHASE
[GLUTAMINE-HYDROLYZI
NG] SUBUNIT A

(Pyrococcus
horikoshii)
4 / 8 GLU A 113
PHE A 139
ILE A 150
VAL A 132
SNN  A 112 ( 3.2A)
None
None
None
0.94A 4dx7B-1wl8A:
undetectable
4dx7B-1wl8A:
11.58
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4LAJ_B_ACAB512_1
(HIV-1 YU2 GP120
ENVELOPE
GLYCOPROTEIN)
3nzm DNA POLYMERASE III
SUBUNIT ALPHA

(Synechocystis
sp.
PCC
6803)
4 / 6 ARG A  50
GLY A  51
ASP A 140
HIS A  72
None
None
SNN  A 159 ( 4.9A)
SNN  A 159 ( 3.5A)
1.22A 4lajA-3nzmA:
undetectable
4lajB-3nzmA:
undetectable
4lajA-3nzmA:
18.13
4lajB-3nzmA:
18.13
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MA3_L_ACTL301_0
(C2095 HEAVY CHAIN
C2095 LIGHT CHAIN)
4d3y LEGUMAIN
(Cricetulus
griseus)
3 / 3 PRO A 316
ASN A  47
HIS A 153
None
None
SNN  A 152 ( 3.5A)
1.03A 4ma3H-4d3yA:
undetectable
4ma3L-4d3yA:
undetectable
4ma3H-4d3yA:
18.63
4ma3L-4d3yA:
19.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA0_A_SHHA404_1
(HISTONE DEACETYLASE
8)
6dhi -
(-)
5 / 12 TYR A 350
ASP A  65
HIS A  62
ASP A 257
GLY A 256
None
None
SNN  A 164 ( 3.2A)
None
None
1.29A 4qa0A-6dhiA:
undetectable
4qa0A-6dhiA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA2_A_SHHA404_1
(HISTONE DEACETYLASE
8)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
5 / 12 GLY A  72
ASP A  79
HIS A  76
ASP A 270
GLY A 269
None
None
SNN  A 177 ( 3.3A)
None
None
1.11A 4qa2A-6aztA:
2.8
4qa2A-6aztA:
11.57
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QA2_B_SHHB404_1
(HISTONE DEACETYLASE
8)
6dhi -
(-)
5 / 12 TYR A 350
ASP A  65
HIS A  62
ASP A 257
GLY A 256
None
None
SNN  A 164 ( 3.2A)
None
None
1.29A 4qa2B-6dhiA:
2.1
4qa2B-6dhiA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R38_B_RBFB201_1
(BLUE-LIGHT-ACTIVATED
HISTIDINE KINASE 2)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 12 ALA A 218
ALA A 193
ILE A 224
GLY A  66
GLN A 447
SNN  A 176 ( 4.2A)
None
None
SNN  A 176 ( 3.7A)
SNN  A 176 (-3.0A)
1.24A 4r38B-5nijA:
undetectable
4r38B-5nijA:
20.90
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HGC_A_HCYA501_1
(SERPIN)
5nij VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
5 / 12 VAL A 125
PHE A 173
ILE A  79
SER A 175
ASN A 118
None
None
None
SNN  A 176 ( 3.4A)
None
1.41A 5hgcA-5nijA:
undetectable
5hgcA-5nijA:
11.17
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HI2_A_BAXA801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)
1wl8 GMP SYNTHASE
[GLUTAMINE-HYDROLYZI
NG] SUBUNIT A

(Pyrococcus
horikoshii)
5 / 8 ILE A  29
VAL A 124
ILE A 178
ILE A 106
ILE A 114
None
None
None
None
SNN  A 112 ( 4.2A)
1.31A 5hi2A-1wl8A:
undetectable
5hi2A-1wl8A:
21.12
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IGV_A_ZITA404_1
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E II)
6dhi -
(-)
5 / 12 GLY A 210
GLU A 435
ALA A 445
ILE A 179
TYR A 162
None
None
None
None
SNN  A 164 ( 4.6A)
1.21A 5igvA-6dhiA:
undetectable
5igvA-6dhiA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IGV_A_ZITA404_2
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E II)
2omk HYPOTHETICAL PROTEIN
(Bacteroides
thetaiotaomicron)
4 / 4 ASN A  15
ILE A  99
TYR A 122
PHE A 138
SNN  A  38 ( 3.4A)
None
None
None
1.32A 5igvA-2omkA:
undetectable
5igvA-2omkA:
22.54
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5VKQ_C_PCFC1801_0
(NO MECHANORECEPTOR
POTENTIAL C ISOFORM
L)
6dhi -
(-)
4 / 9 ILE A 179
TYR A 162
ILE A 160
ILE A 200
None
SNN  A 164 ( 4.6A)
None
None
0.70A 5vkqB-6dhiA:
undetectable
5vkqC-6dhiA:
undetectable
5vkqB-6dhiA:
undetectable
5vkqC-6dhiA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WBV_A_SAMA402_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
KMT5B)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
5 / 12 SER A 248
GLY A 243
ALA A 244
HIS A 178
GLU A 218
None
None
None
SNN  A 177 (-3.6A)
None
1.36A 5wbvA-6aztA:
undetectable
5wbvA-6aztA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WBV_B_SAMB402_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
KMT5B)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
5 / 12 SER A 248
GLY A 243
ALA A 244
HIS A 178
GLU A 218
None
None
None
SNN  A 177 (-3.6A)
None
1.37A 5wbvB-6aztA:
undetectable
5wbvB-6aztA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AG0_C_ACRC607_0
(ALPHA-AMYLASE)
5obt VACUOLAR-PROCESSING
ENZYME GAMMA-ISOZYME

(Arabidopsis
thaliana)
4 / 6 GLY A 181
ASP A 195
GLY A 178
GLY A 184
None
None
None
SNN  A 176 ( 3.3A)
0.74A 6ag0C-5obtA:
undetectable
6ag0C-5obtA:
15.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6AG0_C_ACRC607_0
(ALPHA-AMYLASE)
6azt ASPARAGINYL
ENDOPEPTIDASE 1

(Helianthus
annuus)
4 / 6 GLY A 182
ASP A 196
GLY A 179
GLY A 185
None
None
GOL  A 503 (-3.7A)
SNN  A 177 ( 3.2A)
0.76A 6ag0C-6aztA:
undetectable
6ag0C-6aztA:
18.07