SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SND'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3LOQ_A_ACTA277_0 (UNIVERSAL STRESS PROTEIN)	1ptj	NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA PART 1 (Rhodospirillum rubrum)	3 / 3	ASP A 135 SER A 138 ARG A 127	SND A 500 (-3.7A) SND A 500 (-3.1A) SND A 500 (-3.9A)	0.97A	3loqA-1ptjA: 4.7	3loqA-1ptjA: 24.06
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4EYR_B_RITB301_1 (HIV-1 PROTEASE)	1ptj	NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA PART 1 (Rhodospirillum rubrum)	4 / 7	LEU A 266 ALA A 183 VAL A 180 ILE A 260	SND A 500 (-3.6A) None None None	0.96A	4eyrA-1ptjA: undetectable	4eyrA-1ptjA: 13.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4QTU_D_SAMD301_0 (PUTATIVE METHYLTRANSFERASE BUD23)	1ptj	NAD(P) TRANSHYDROGENASE SUBUNIT ALPHA PART 1 (Rhodospirillum rubrum)	5 / 12	GLY A 145 GLY A 184 ILE A 291 SER A 141 ALA A 144	None None None SND A 500 ( 4.7A) None	1.18A	4qtuD-1ptjA: 3.8	4qtuD-1ptjA: 19.37