SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SEE'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GHM_A_CEDA1_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
LYS A  71
SER A 125
ASN A 127
LYS A 232
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.40A 1ghmA-6aziA:
20.8
1ghmA-6aziA:
22.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_A_CFXA1300_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
7 / 12 ALA A  67
LYS A  71
SER A 125
ASN A 127
THR A 217
LYS A 232
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.47A 1i2wA-6aziA:
21.7
1i2wA-6aziA:
26.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1I2W_B_CFXB2300_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
LYS A  71
SER A 125
ASN A 127
THR A 217
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.9A)
0.46A 1i2wB-6aziA:
21.7
1i2wB-6aziA:
26.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1YMX_A_CFXA1001_1
(BETA-LACTAMASE
CTX-M-9)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 LYS A  71
SER A 125
ASN A 127
THR A 217
LYS A 232
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.38A 1ymxA-6aziA:
21.5
1ymxA-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_B_SAMB601_0
(CATECHOL-O-METHYLTRA
NSFERASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 GLY A 240
PHE A 262
ALA A  67
ASP A 260
ALA A 239
None
None
SEE  A  68 ( 2.7A)
None
None
1.16A 2avdB-6aziA:
undetectable
2avdB-6aziA:
21.36
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HCR_B_CHDB924_0
(FERROCHELATASE,
MITOCHONDRIAL)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
4 / 7 LEU A 179
ARG A  64
SER A 125
GLY A 240
None
None
SEE  A  68 ( 1.4A)
None
1.04A 3hcrB-6aziA:
undetectable
3hcrB-6aziA:
20.37
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_A_CE3A301_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 LYS A  71
SER A 125
ASN A 127
THR A 217
LYS A 232
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.47A 3hlwA-6aziA:
21.5
3hlwA-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HLW_B_CE3B302_1
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 SER A 125
ASN A 127
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.36A 3hlwB-6aziA:
21.6
3hlwB-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3HUO_A_PNNA300_0
(CTX-M-9
EXTENDED-SPECTRUM
BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 LYS A  71
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.39A 3huoA-6aziA:
21.6
3huoA-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MZE_A_CFXA364_1
(D-ALANYL-D-ALANINE
CARBOXYPEPTIDASE
DACA)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
LYS A  71
ASN A 127
LEU A 168
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 3.6A)
None
None
SEE  A  68 ( 3.9A)
0.47A 3mzeA-6aziA:
30.2
3mzeA-6aziA:
26.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MZE_A_CFXA364_1
(D-ALANYL-D-ALANINE
CARBOXYPEPTIDASE
DACA)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
LYS A  71
ASN A 127
THR A 233
GLY A 234
THR A 236
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.9A)
None
0.60A 3mzeA-6aziA:
30.2
3mzeA-6aziA:
26.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_A_WPPA300_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 LYS A  71
SER A 125
ASN A 127
LYS A 232
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.53A 3q07A-6aziA:
21.5
3q07A-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3Q07_B_WPPB400_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 LYS A  71
SER A 125
ASN A 127
LYS A 232
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.38A 3q07B-6aziA:
21.6
3q07B-6aziA:
27.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_A_CEDA1_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
SER A 125
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.35A 3sh8A-6aziA:
21.8
3sh8A-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SH8_B_CEDB1_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
LYS A  71
SER A 125
ASN A 127
LYS A 232
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.49A 3sh8B-6aziA:
21.7
3sh8B-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
7 / 12 LYS A  71
SER A 125
ASN A 127
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.40A 4euzA-6aziA:
20.8
4euzA-6aziA:
22.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EUZ_A_MEMA401_1
(CARBAPENEM-HYDROLIZI
NG BETA-LACTAMASE
SFC-1)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
7 / 12 SER A 125
ASN A 127
LEU A 168
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.72A 4euzA-6aziA:
20.8
4euzA-6aziA:
22.61
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_A_CEDA301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
SER A 125
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.31A 4n9kA-6aziA:
21.9
4n9kA-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4N9K_B_CEDB301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 12 ALA A  67
SER A 125
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.33A 4n9kB-6aziA:
21.9
4n9kB-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM5_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 ASN A 127
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.32A 4pm5A-6aziA:
21.4
4pm5A-6aziA:
27.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM7_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 LYS A  71
ASN A 127
THR A 217
LYS A 232
GLY A 234
SEE  A  68 ( 2.8A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.47A 4pm7A-6aziA:
21.4
4pm7A-6aziA:
27.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PM9_A_CE3A301_1
(BETA-LACTAMASE
CTX-M-14)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 ASN A 127
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.32A 4pm9A-6aziA:
21.4
4pm9A-6aziA:
28.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHY_A_CEDA301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 ALA A  67
SER A 125
ASN A 127
LYS A 232
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.32A 5ghyA-6aziA:
21.6
5ghyA-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_A_CEDA301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 11 ALA A  67
SER A 125
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.33A 5ghzA-6aziA:
21.7
5ghzA-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5GHZ_B_CEDB301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
6 / 10 ALA A  67
SER A 125
ASN A 127
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 2.7A)
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.31A 5ghzB-6aziA:
21.7
5ghzB-6aziA:
24.76
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B5Y_D_9F2D400_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 SER A 125
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 1.4A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.44A 6b5yD-6aziA:
21.4
6b5yD-6aziA:
17.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6B68_B_9F2B301_1
(BETA-LACTAMASE)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 SER A 125
THR A 217
LYS A 232
THR A 233
GLY A 234
SEE  A  68 ( 1.4A)
None
SEE  A  68 ( 3.5A)
None
SEE  A  68 ( 3.9A)
0.28A 6b68B-6aziA:
21.4
6b68B-6aziA:
17.14
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6C79_A_CE3A301_1
(BETA-LACTAMASE
TOHO-1)
6azi D-ALANYL-D-ALANINE
ENDOPEPTIDASE

(Enterobacter
cloacae)
5 / 12 SER A 125
ASN A 127
THR A 217
LYS A 232
GLY A 234
SEE  A  68 ( 1.4A)
SEE  A  68 ( 3.6A)
None
SEE  A  68 ( 3.5A)
SEE  A  68 ( 3.9A)
0.30A 6c79A-6aziA:
21.7
6c79A-6aziA:
15.22