SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SE7'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3T3S_C_9PLC1_1
(CYTOCHROME P450 2A13)
6elw PHOSPHOLIPID
HYDROPEROXIDE
GLUTATHIONE
PEROXIDASE,
MITOCHONDRIAL

(Homo
sapiens)
4 / 7 PHE A  92
ASN A  76
ALA A  43
THR A  49
None
None
SE7  A  46 ( 4.6A)
SE7  A  46 ( 3.7A)
0.89A 3t3sC-6elwA:
undetectable
3t3sC-6elwA:
9.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3T3S_E_9PLE1_1
(CYTOCHROME P450 2A13)
6elw PHOSPHOLIPID
HYDROPEROXIDE
GLUTATHIONE
PEROXIDASE,
MITOCHONDRIAL

(Homo
sapiens)
4 / 8 PHE A  92
ASN A  76
ALA A  43
THR A  49
None
None
SE7  A  46 ( 4.6A)
SE7  A  46 ( 3.7A)
0.93A 3t3sE-6elwA:
undetectable
3t3sE-6elwA:
9.32
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DV4_A_NMYA601_2
(CCR4-NOT
TRANSCRIPTION
COMPLEX SUBUNIT
6-LIKE)
1gp1 GLUTATHIONE
PEROXIDASE

(Bos
taurus)
3 / 3 GLU A 161
TRP A 158
ASN A 114
None
SE7  A  45 ( 4.4A)
None
1.00A 5dv4A-1gp1A:
undetectable
5dv4A-1gp1A:
19.54