SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SDT'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GVC_B_MMZB501_1
(MONOOXYGENASE)
2zi8 PROBABLE
BIPHENYL-2,3-DIOL
1,2-DIOXYGENASE BPHC

(Mycobacterium
tuberculosis)
3 / 3 ASN A 249
TYR A 256
SER A 288
SDT  A 702 (-2.9A)
None
None
0.92A 2gvcB-2zi8A:
undetectable
2gvcB-2zi8A:
20.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GVC_E_MMZE501_1
(MONOOXYGENASE)
2zi8 PROBABLE
BIPHENYL-2,3-DIOL
1,2-DIOXYGENASE BPHC

(Mycobacterium
tuberculosis)
3 / 3 ASN A 249
TYR A 256
SER A 288
SDT  A 702 (-2.9A)
None
None
0.93A 2gvcE-2zi8A:
undetectable
2gvcE-2zi8A:
20.35
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2WKO_F_CUF154_0
(SUPEROXIDE DISMUTASE
[CU-ZN])
2zi8 PROBABLE
BIPHENYL-2,3-DIOL
1,2-DIOXYGENASE BPHC

(Mycobacterium
tuberculosis)
4 / 5 HIS A 145
HIS A 200
VAL A 147
HIS A 215
FE2  A 701 ( 3.3A)
SDT  A 702 (-4.0A)
None
FE2  A 701 ( 3.3A)
0.92A 2wkoF-2zi8A:
undetectable
2wkoF-2zi8A:
20.20