SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'SDS'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4AZT_A_SAMA1472_1
(METHYLTRANSFERASE
WBDD)		 3gp6 PROTEIN PAGP
(Escherichia
coli) 		3 / 3 GLN A 139
ASP A  24
GLN A 160
 SDS  A 163 ( 3.9A)
None
None
 0.89A 4aztA-3gp6A:
undetectable		 4aztA-3gp6A:
14.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5U6M_A_SALA503_1
(UDP-GLYCOSYLTRANSFER
ASE 74F2)		 3gp6 PROTEIN PAGP
(Escherichia
coli) 		4 / 7 THR A 141
PHE A  74
MET A  72
THR A 112
 SDS  A 163 ( 4.4A)
SO4  A 181 ( 4.8A)
SDS  A 163 (-4.6A)
SDS  A 163 ( 4.2A)
 1.18A 5u6mA-3gp6A:
undetectable		 5u6mA-3gp6A:
13.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6GNG_A_QPSA601_1
(-)		 3gp6 PROTEIN PAGP
(Escherichia
coli) 		5 / 12 GLY A  88
THR A 137
GLY A 132
ASP A  61
ASN A  65
 SDS  A 163 ( 4.7A)
None
SDS  A 166 (-3.3A)
None
None
 1.16A 6gngA-3gp6A:
undetectable		 6gngA-3gp6A:
15.06