SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'RRM'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MDV_B_CL6B506_1
(CHOLESTEROL
24-HYDROXYLASE)
3wvs PUTATIVE
MONOOXYGENASE

(Streptomyces
sp.
SN-593)
5 / 12 LEU A 176
ILE A 240
ALA A 241
GLU A 244
THR A 245
RRM  A 502 (-4.9A)
RRM  A 502 ( 3.9A)
HEM  A 501 (-3.8A)
None
HEM  A 501 (-3.3A)
0.73A 3mdvB-3wvsA:
32.3
3mdvB-3wvsA:
24.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RRW_D_LURD705_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
3wvs PUTATIVE
MONOOXYGENASE

(Streptomyces
sp.
SN-593)
5 / 12 LEU A  25
SER A  26
LEU A 287
GLY A 288
SER A 291
None
None
HEM  A 501 (-4.3A)
RRM  A 502 (-3.6A)
None
1.05A 4rrwD-3wvsA:
undetectable
4rrwD-3wvsA:
21.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RRZ_D_LURD705_1
(PROSTAGLANDIN G/H
SYNTHASE 2)
3wvs PUTATIVE
MONOOXYGENASE

(Streptomyces
sp.
SN-593)
5 / 12 LEU A  25
SER A  26
LEU A 287
GLY A 288
SER A 291
None
None
HEM  A 501 (-4.3A)
RRM  A 502 (-3.6A)
None
1.05A 4rrzD-3wvsA:
undetectable
4rrzD-3wvsA:
21.71
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Y8W_B_STRB603_1
(CYTOCHROME P450
21-HYDROXYLASE)
3wvs PUTATIVE
MONOOXYGENASE

(Streptomyces
sp.
SN-593)
5 / 12 VAL A 194
LEU A 193
ILE A 236
GLY A 237
LEU A 176
None
None
RRM  A 502 (-4.2A)
RRM  A 502 (-3.7A)
RRM  A 502 (-4.9A)
1.11A 4y8wB-3wvsA:
32.9
4y8wB-3wvsA:
26.44