SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'QEM'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	3QEL_B_QELB1_1 (NMDA GLUTAMATE RECEPTOR SUBUNIT GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	7 / 11	ALA B 102 GLN B 105 ILE B 106 PHE B 109 THR B 169 PRO B 172 GLU B 231	QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-3.8A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.51A	3qelA-4tllB: 30.6 3qelB-4tllB: 49.4	3qelA-4tllB: 18.38 3qelB-4tllB: 38.85
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	3QEL_D_QELD2_2 (GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	9 / 9	PRO B 73 ALA B 102 GLN B 105 ILE B 106 PHE B 109 THR B 169 PHE B 171 PRO B 172 GLU B 231	None QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-3.8A) QEM B 901 (-4.7A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.56A	3qelD-4tllB: 28.5	3qelD-4tllB: 38.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4PE5_B_QELB920_1 (GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1 GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	6 / 10	ALA B 102 GLN B 105 ILE B 106 PHE B 109 PRO B 172 GLU B 231	QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.48A	4pe5A-4tllB: 30.1 4pe5B-4tllB: 35.9	4pe5A-4tllB: 29.93 4pe5B-4tllB: 86.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4PE5_C_QELC939_1 (GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1 GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	6 / 10	ALA B 102 GLN B 105 ILE B 106 PHE B 109 PRO B 172 GLU B 231	QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.53A	4pe5C-4tllB: 30.6 4pe5D-4tllB: 50.2	4pe5C-4tllB: 29.93 4pe5D-4tllB: 86.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5EWJ_B_QELB503_1 (NMDA GLUTAMATE RECEPTOR SUBUNIT GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	7 / 11	PRO B 73 ALA B 102 GLN B 105 ILE B 106 PHE B 109 PRO B 172 GLU B 231	None QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.55A	5ewjA-4tllB: 30.5 5ewjB-4tllB: 49.3	5ewjA-4tllB: 19.51 5ewjB-4tllB: 38.85
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	5EWJ_D_QELD503_1 (NMDA GLUTAMATE RECEPTOR SUBUNIT GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B)	4tll	RECEPTOR SUBUNIT GLUN2B (Xenopus laevis)	8 / 12	PRO B 73 ALA B 102 GLN B 105 ILE B 106 PHE B 109 THR B 169 PRO B 172 GLU B 231	None QEM B 901 ( 4.0A) QEM B 901 (-3.3A) QEM B 901 (-4.6A) QEM B 901 (-4.4A) QEM B 901 (-3.8A) QEM B 901 (-4.5A) QEM B 901 (-3.1A)	0.58A	5ewjC-4tllB: 20.9 5ewjD-4tllB: 48.9	5ewjC-4tllB: 19.51 5ewjD-4tllB: 38.85

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["3QEL_B_QELB1_1","NMDA GLUTAMATE RECEPTOR SUBUNIT;GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",7,"ALA B 102;GLN B 105;ILE B 106;PHE B 109;THR B 169;PRO B 172;GLU B 231","QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-3.8A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.51A","3qelA-4tllB:30.6;3qelB-4tllB:49.4",null],["3QEL_D_QELD2_2","GLUTAMATE [NMDA] RECEPTOR SUBUNIT EPSILON-2","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",9,"PRO B  73;ALA B 102;GLN B 105;ILE B 106;PHE B 109;THR B 169;PHE B 171;PRO B 172;GLU B 231","None;QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-3.8A);QEM B 901 (-4.7A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.56A","3qelD-4tllB:28.5","3qelA-4tllB:18.38;3qelB-4tllB:38.85"],["4PE5_B_QELB920_1","GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1;GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",6,"ALA B 102;GLN B 105;ILE B 106;PHE B 109;PRO B 172;GLU B 231","QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.48A","4pe5A-4tllB:30.1;4pe5B-4tllB:35.9","3qelD-4tllB:38.85"],["4PE5_C_QELC939_1","GLUTAMATE RECEPTOR IONOTROPIC, NMDA 1;GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",6,"ALA B 102;GLN B 105;ILE B 106;PHE B 109;PRO B 172;GLU B 231","QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.53A","4pe5C-4tllB:30.6;4pe5D-4tllB:50.2","4pe5A-4tllB:29.93;4pe5B-4tllB:86.11"],["5EWJ_B_QELB503_1","NMDA GLUTAMATE RECEPTOR SUBUNIT;GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",7,"PRO B  73;ALA B 102;GLN B 105;ILE B 106;PHE B 109;PRO B 172;GLU B 231","None;QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.55A","5ewjA-4tllB:30.5;5ewjB-4tllB:49.3","4pe5C-4tllB:29.93;4pe5D-4tllB:86.11"],["5EWJ_D_QELD503_1","NMDA GLUTAMATE RECEPTOR SUBUNIT;GLUTAMATE RECEPTOR IONOTROPIC, NMDA 2B","4tll","RECEPTOR SUBUNIT GLUN2B","Xenopus laevis",8,"PRO B  73;ALA B 102;GLN B 105;ILE B 106;PHE B 109;THR B 169;PRO B 172;GLU B 231","None;QEM B 901 ( 4.0A);QEM B 901 (-3.3A);QEM B 901 (-4.6A);QEM B 901 (-4.4A);QEM B 901 (-3.8A);QEM B 901 (-4.5A);QEM B 901 (-3.1A)","0.58A","5ewjC-4tllB:20.9;5ewjD-4tllB:48.9","5ewjA-4tllB:19.51;5ewjB-4tllB:38.85"]]