SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'PYS'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MJQ_G_SAMG199_0
(METHIONINE REPRESSOR)		 1cte CATHEPSIN B
(Rattus
norvegicus) 		5 / 10 GLU A  36
ALA A 200
HIS A 199
PHE A  32
GLY A  27
 None
None
PYS  A 255 ( 4.1A)
None
None
 1.25A 1mjqG-1cteA:
undetectable
1mjqH-1cteA:
undetectable		 1mjqG-1cteA:
16.87
1mjqH-1cteA:
16.87
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))		 1cte CATHEPSIN B
(Rattus
norvegicus) 		6 / 10 GLN A  23
GLY A  27
SER A  28
TRP A  30
PHE A  32
ALA A 200
 PYS  A 255 (-2.9A)
None
None
None
None
None
 0.42A 1stfE-1cteA:
27.2
1stfI-1cteA:
0.0		 1stfE-1cteA:
31.03
1stfI-1cteA:
15.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))		 2ipp CATHEPSIN B
CATHEPSIN B
(Homo
sapiens;
Homo
sapiens) 		7 / 10 GLN A  23
GLY A  27
SER A  28
TRP A  30
PHE A  32
HIS B 199
ALA B 200
 PYS  A 255 ( 4.7A)
PYS  A 255 (-3.3A)
None
None
None
None
None
 0.35A 1stfE-2ippA:
undetectable
1stfI-2ippA:
undetectable		 1stfE-2ippA:
10.19
1stfI-2ippA:
15.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2AVD_A_SAMA501_0
(CATECHOL-O-METHYLTRA
NSFERASE)		 1cte CATHEPSIN B
(Rattus
norvegicus) 		5 / 12 GLY A  33
SER A 220
VAL A 247
ALA A  79
ALA A  34
 None
PYS  A 255 ( 3.8A)
None
None
None
 1.49A 2avdA-1cteA:
undetectable		 2avdA-1cteA:
22.76
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AI8_A_HNQA255_1
(CATHEPSIN B)		 1cte CATHEPSIN B
(Rattus
norvegicus) 		5 / 7 GLN A  23
GLY A  27
HIS A 110
HIS A 111
TRP A 221
 PYS  A 255 (-2.9A)
None
None
None
PYS  A 255 (-4.0A)
 0.30A 3ai8A-1cteA:
45.8		 3ai8A-1cteA:
82.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AI8_A_HNQA255_1
(CATHEPSIN B)		 2ipp CATHEPSIN B
(Homo
sapiens) 		6 / 7 GLN A  23
GLY A  27
HIS B 110
HIS B 111
HIS B 199
TRP B 221
 PYS  A 255 ( 4.7A)
PYS  A 255 (-3.3A)
None
None
None
None
 0.45A 3ai8A-2ippA:
undetectable		 3ai8A-2ippA:
95.92
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AI8_B_HNQB255_1
(CATHEPSIN B)		 1cte CATHEPSIN B
(Rattus
norvegicus) 		5 / 6 GLN A  23
GLY A  27
HIS A 110
HIS A 111
TRP A 221
 PYS  A 255 (-2.9A)
None
None
None
PYS  A 255 (-4.0A)
 0.23A 3ai8B-1cteA:
45.8		 3ai8B-1cteA:
82.42
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
3AI8_B_HNQB255_1
(CATHEPSIN B)		 2ipp CATHEPSIN B
(Homo
sapiens) 		5 / 6 GLN A  23
GLY A  27
HIS B 110
HIS B 111
TRP B 221
 PYS  A 255 ( 4.7A)
PYS  A 255 (-3.3A)
None
None
None
 0.34A 3ai8B-2ippA:
undetectable		 3ai8B-2ippA:
95.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4RZV_A_032A801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 1cte CATHEPSIN B
(Rattus
norvegicus) 		4 / 5 ILE A 201
VAL A 217
CYH A 240
HIS A 199
 PYS  A 255 (-4.6A)
None
None
PYS  A 255 ( 4.1A)
 1.13A 4rzvA-1cteA:
0.0		 4rzvA-1cteA:
21.17