SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'PYD'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	1DZ4_A_CAMA502_0 (CYTOCHROME P450-CAM)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	4 / 6	LEU A 303 VAL A 299 VAL A 62 ASP A 272	None None None PYD A 371 (-4.3A)	1.15A	1dz4A-4thiA: undetectable	1dz4A-4thiA: 21.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	2PNC_A_CLUA808_1 (COPPER AMINE OXIDASE, LIVER ISOZYME)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	4 / 7	TYR A 239 TYR A 270 ASP A 64 TYR A 16	PYD A 371 (-4.2A) PYD A 371 ( 3.7A) None None	1.42A	2pncA-4thiA: undetectable	2pncA-4thiA: 19.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4G3R_B_CAMB502_0 (CAMPHOR 5-MONOOXYGENASE)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	4 / 6	LEU A 303 VAL A 299 VAL A 62 ASP A 272	None None None PYD A 371 (-4.3A)	1.11A	4g3rB-4thiA: undetectable	4g3rB-4thiA: 22.25
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	4KYS_A_VIBA501_1 (THIAMINE PYRIDINYLASE I)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	9 / 10	TYR A 16 TYR A 50 ASP A 64 THR A 163 TYR A 239 GLU A 241 TYR A 270 ASP A 272 LEU A 315	None None None None PYD A 371 (-4.2A) PYD A 371 ( 4.3A) PYD A 371 ( 3.7A) PYD A 371 (-4.3A) None	0.70A	4kysA-4thiA: 55.3	4kysA-4thiA: 48.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	4KYS_B_VIBB501_1 (THIAMINE PYRIDINYLASE I)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	10 / 11	TYR A 16 TYR A 50 ASP A 64 ILE A 111 THR A 163 TYR A 239 GLU A 241 TYR A 270 ASP A 272 LEU A 315	None None None None None PYD A 371 (-4.2A) PYD A 371 ( 4.3A) PYD A 371 ( 3.7A) PYD A 371 (-4.3A) None	0.70A	4kysB-4thiA: 55.2	4kysB-4thiA: 48.19
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.	4KYS_B_VIBB501_1 (THIAMINE PYRIDINYLASE I)	4thi	PROTEIN (THIAMINASE I) (Bacillus subtilis)	8 / 11	TYR A 16 TYR A 50 ASP A 64 ILE A 111 THR A 164 TYR A 270 ASP A 272 LEU A 315	None None None None None PYD A 371 ( 3.7A) PYD A 371 (-4.3A) None	1.41A	4kysB-4thiA: 55.2	4kysB-4thiA: 48.19

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["1DZ4_A_CAMA502_0","CYTOCHROME P450-CAM","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",4,"LEU A 303;VAL A 299;VAL A  62;ASP A 272","None;None;None;PYD A 371 (-4.3A)","1.15A","1dz4A-4thiA:undetectable",null],["2PNC_A_CLUA808_1","COPPER AMINE OXIDASE, LIVER ISOZYME","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",4,"TYR A 239;TYR A 270;ASP A  64;TYR A  16","PYD A 371 (-4.2A);PYD A 371 ( 3.7A);None;None","1.42A","2pncA-4thiA:undetectable","1dz4A-4thiA:21.41"],["4G3R_B_CAMB502_0","CAMPHOR 5-MONOOXYGENASE","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",4,"LEU A 303;VAL A 299;VAL A  62;ASP A 272","None;None;None;PYD A 371 (-4.3A)","1.11A","4g3rB-4thiA:undetectable","2pncA-4thiA:19.39"],["4KYS_A_VIBA501_1","THIAMINE PYRIDINYLASE I","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",9,"TYR A  16;TYR A  50;ASP A  64;THR A 163;TYR A 239;GLU A 241;TYR A 270;ASP A 272;LEU A 315","None;None;None;None;PYD A 371 (-4.2A);PYD A 371 ( 4.3A);PYD A 371 ( 3.7A);PYD A 371 (-4.3A);None","0.70A","4kysA-4thiA:55.3","4g3rB-4thiA:22.25"],["4KYS_B_VIBB501_1","THIAMINE PYRIDINYLASE I","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",10,"TYR A  16;TYR A  50;ASP A  64;ILE A 111;THR A 163;TYR A 239;GLU A 241;TYR A 270;ASP A 272;LEU A 315","None;None;None;None;None;PYD A 371 (-4.2A);PYD A 371 ( 4.3A);PYD A 371 ( 3.7A);PYD A 371 (-4.3A);None","0.70A","4kysB-4thiA:55.2","4kysA-4thiA:48.19"],["4KYS_B_VIBB501_1","THIAMINE PYRIDINYLASE I","4thi","PROTEIN (THIAMINASE I)","Bacillus subtilis",8,"TYR A  16;TYR A  50;ASP A  64;ILE A 111;THR A 164;TYR A 270;ASP A 272;LEU A 315","None;None;None;None;None;PYD A 371 ( 3.7A);PYD A 371 (-4.3A);None","1.41A","4kysB-4thiA:55.2","4kysB-4thiA:48.19"]]