SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'PXP'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1FDU_A_ESTA351_1
(17-BETA-HYDROXYSTERO
ID DEHYDROGENASE)
3f4n PYRIDOXINE
5'-PHOSPHATE
SYNTHASE

(Yersinia
pestis)
5 / 12 VAL A   8
GLY A   7
LEU A   6
GLY A 215
LEU A 237
None
None
None
PXP  A 501 (-3.6A)
None
1.01A 1fduA-3f4nA:
undetectable
1fduA-3f4nA:
20.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A2Q_A_ACAA602_1
(6-AMINOHEXANOATE-CYC
LIC-DIMER HYDROLASE)
3f4n PYRIDOXINE
5'-PHOSPHATE
SYNTHASE

(Yersinia
pestis)
4 / 7 ASN A   9
ALA A  31
ALA A  30
ALA A  34
PXP  A 501 (-4.3A)
None
None
None
0.63A 3a2qA-3f4nA:
undetectable
3a2qA-3f4nA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CE6_D_ADND500_1
(ADENOSYLHOMOCYSTEINA
SE)
3f4n PYRIDOXINE
5'-PHOSPHATE
SYNTHASE

(Yersinia
pestis)
5 / 12 THR A 156
GLU A  72
THR A  43
GLY A 194
PHE A 133
None
PXP  A 501 (-3.0A)
None
PXP  A 501 (-3.5A)
PXP  A 501 (-3.3A)
1.48A 3ce6D-3f4nA:
undetectable
3ce6D-3f4nA:
20.00