SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'PCW'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3NUV_A_ASDA126_1
(STEROID
DELTA-ISOMERASE)		 4f2a CHOLESTERYL ESTER
TRANSFER PROTEIN
(Homo
sapiens) 		5 / 12 PHE A 429
LEU A 455
PHE A 265
VAL A 269
PHE A 236
 2OB  A 606 (-3.5A)
None
PCW  A 607 (-4.4A)
None
PCW  A 607 (-4.5A)
 1.40A 3nuvA-4f2aA:
1.8		 3nuvA-4f2aA:
14.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3V4T_A_ACTA503_0
(UDP-N-ACETYLGLUCOSAM
INE
1-CARBOXYVINYLTRANSF
ERASE)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		3 / 3 ARG A 244
GLU A  46
THR A  58
 None
None
PCW  A 501 (-3.8A)
 0.89A 3v4tA-2a1lA:
undetectable		 3v4tA-2a1lA:
22.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GKH_I_KANI301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		5 / 11 GLN A 214
ASP A 153
ASN A 223
GLU A  33
GLU A 150
 None
None
None
PCW  A 501 (-4.0A)
None
 1.45A 4gkhI-2a1lA:
0.9
4gkhJ-2a1lA:
0.9		 4gkhI-2a1lA:
20.53
4gkhJ-2a1lA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GKI_E_KANE301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		5 / 10 GLN A 214
ASP A 153
ASN A 223
GLU A  33
GLU A 150
 None
None
None
PCW  A 501 (-4.0A)
None
 1.33A 4gkiE-2a1lA:
0.9		 4gkiE-2a1lA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4GKI_L_KANL301_1
(AMINOGLYCOSIDE
3'-PHOSPHOTRANSFERAS
E APHA1-IAB)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		5 / 12 GLN A 214
ASP A 153
ASN A 223
GLU A  33
GLU A 150
 None
None
None
PCW  A 501 (-4.0A)
None
 1.46A 4gkiK-2a1lA:
0.9
4gkiL-2a1lA:
0.9		 4gkiK-2a1lA:
20.53
4gkiL-2a1lA:
20.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z7F_B_FOLB201_0
(FOLATE ECF
TRANSPORTER)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		5 / 12 ALA A 192
PHE A   7
PHE A 221
THR A 222
LYS A  60
 None
None
PCW  A 501 (-4.9A)
None
PCW  A 501 ( 3.8A)
 1.34A 4z7fB-2a1lA:
0.0		 4z7fB-2a1lA:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4Z7F_C_FOLC201_0
(FOLATE ECF
TRANSPORTER)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		5 / 12 ALA A 192
PHE A   7
PHE A 221
THR A 222
LYS A  60
 None
None
PCW  A 501 (-4.9A)
None
PCW  A 501 ( 3.8A)
 1.29A 4z7fC-2a1lA:
undetectable		 4z7fC-2a1lA:
21.09
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5PBE_A_TYLA2001_1
(BROMODOMAIN ADJACENT
TO ZINC FINGER
DOMAIN PROTEIN 2B)		 2a1l PHOSPHATIDYLINOSITOL
TRANSFER PROTEIN
BETA ISOFORM
(Rattus
norvegicus) 		4 / 6 PRO A  77
VAL A  72
VAL A  68
ASN A 100
 None
PCW  A 501 (-4.2A)
None
PCW  A 501 ( 3.6A)
 0.92A 5pbeA-2a1lA:
undetectable		 5pbeA-2a1lA:
18.05