SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'P4G'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1A27_A_ESTA350_1
(17-BETA-HYDROXYSTERO
ID-DEHYDROGENASE)
3ci6 PHOSPHOENOLPYRUVATE-
PROTEIN
PHOSPHOTRANSFERASE

(Acinetobacter
sp.
ADP1)
5 / 12 VAL A 117
GLY A 116
LEU A 115
ASN A  90
MET A  37
None
None
None
None
P4G  A 169 ( 4.3A)
1.25A 1a27A-3ci6A:
undetectable
1a27A-3ci6A:
24.07
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AQI_B_CHDB4_0
(FERROCHELATASE)
5oex -
(-)
4 / 6 ARG A 237
PRO A 414
GLY A 322
TRP A 324
P4G  A 605 (-3.9A)
None
None
None
1.24A 3aqiB-5oexA:
undetectable
3aqiB-5oexA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ARR_A_PNXA607_1
(CHITINASE A)
3wmr PROLINE
IMINOPEPTIDASE

(Streptomyces
halstedii)
4 / 7 TRP A 111
VAL A 210
LEU A  86
TRP A 229
None
None
None
P4G  A 402 (-4.4A)
1.10A 3arrA-3wmrA:
undetectable
3arrA-3wmrA:
19.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4PGH_C_SAMC401_0
(CAFFEIC ACID
O-METHYLTRANSFERASE)
5yqw PEPTIDE ABC
TRANSPORTER,
PERIPLASMIC
PEPTIDE-BINDING
PROTEIN

(Vibrio
harveyi)
5 / 11 SER A 125
GLY A 104
ASP A 101
VAL A  94
MET A 434
P4G  A 602 (-3.5A)
P4G  A 602 ( 4.2A)
None
None
None
1.48A 4pghC-5yqwA:
undetectable
4pghC-5yqwA:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4QYN_B_RTLB201_0
(RETINOL-BINDING
PROTEIN 2)
6eq8 PERIPLASMIC
ALPHA-GALACTOSIDE-BI
NDING PROTEIN

(Agrobacterium
tumefaciens)
5 / 12 ILE D 113
THR D  88
ARG D 646
LEU D 661
LEU D 285
None
None
None
P4G  D 713 ( 3.6A)
None
1.29A 4qynB-6eq8D:
undetectable
4qynB-6eq8D:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5K9D_A_CE9A402_0
(DIHYDROOROTATE
DEHYDROGENASE
(QUINONE),
MITOCHONDRIAL)
3ci6 PHOSPHOENOLPYRUVATE-
PROTEIN
PHOSPHOTRANSFERASE

(Acinetobacter
sp.
ADP1)
5 / 12 ALA A  34
ALA A  36
THR A   8
PHE A 146
LEU A 150
None
P4G  A 169 ( 4.3A)
P4G  A 169 (-3.6A)
P4G  A 169 ( 4.2A)
None
1.18A 5k9dA-3ci6A:
undetectable
5k9dA-3ci6A:
19.78