SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'P4C'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
1FM4_A_DXCA1002_0
(MAJOR POLLEN
ALLERGEN BET V 1-L)
2wql MAJOR ALLERGEN DAU C
1

(Daucus
carota)
5 / 12 ILE A  56
TYR A  81
VAL A  85
ILE A  98
LEU A 143
None
P4C  A 200 ( 4.5A)
None
PEG  A 201 ( 4.7A)
P4C  A 200 (-4.4A)
0.67A 1fm4A-2wqlA:
23.0
1fm4A-2wqlA:
34.59
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2BM9_F_SAMF301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)
2br4 CEPHALOSPORIN
HYDROXYLASE CMCI

(Streptomyces
clavuligerus)
9 / 12 GLY A  17
LEU A  18
LEU A  64
GLY A  89
ASP A 116
ALA A 161
HIS A 162
ALA A 163
ASP A 187
P4C  A 500 (-4.0A)
SAM  A 301 ( 4.4A)
SAM  A 301 (-4.2A)
SAM  A 301 (-3.3A)
SAM  A 301 (-3.0A)
SAM  A 301 (-3.6A)
MG  A 300 ( 4.4A)
SAM  A 301 ( 3.7A)
MG  A 300 (-3.3A)
0.64A 2bm9F-2br4A:
32.9
2bm9F-2br4A:
99.15
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
2BM9_F_SAMF301_0
(CEPHALOSPORIN
HYDROXYLASE CMCI)
2br4 CEPHALOSPORIN
HYDROXYLASE CMCI

(Streptomyces
clavuligerus)
8 / 12 GLY A  17
LEU A  64
ASP A 116
CYH A 139
ALA A 161
HIS A 162
ALA A 163
ASP A 187
P4C  A 500 (-4.0A)
SAM  A 301 (-4.2A)
SAM  A 301 (-3.0A)
SAM  A 301 (-2.9A)
SAM  A 301 (-3.6A)
MG  A 300 ( 4.4A)
SAM  A 301 ( 3.7A)
MG  A 300 (-3.3A)
0.78A 2bm9F-2br4A:
32.9
2bm9F-2br4A:
99.15
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3ELZ_A_CHDA150_0
(ILEAL BILE
ACID-BINDING PROTEIN)
2wql MAJOR ALLERGEN DAU C
1

(Daucus
carota)
5 / 12 PHE A  20
MET A 102
THR A 100
LEU A  25
ILE A  23
None
P4C  A 200 ( 4.0A)
P4C  A 200 ( 4.1A)
None
P4C  A 200 (-4.3A)
1.43A 3elzA-2wqlA:
1.7
3elzA-2wqlA:
24.36
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4A84_A_DXCA1160_0
(MAJOR POLLEN
ALLERGEN BET V 1-A)
2wql MAJOR ALLERGEN DAU C
1

(Daucus
carota)
5 / 12 ILE A  56
TYR A  81
VAL A  85
ILE A  98
LEU A 143
None
P4C  A 200 ( 4.5A)
None
PEG  A 201 ( 4.7A)
P4C  A 200 (-4.4A)
0.80A 4a84A-2wqlA:
22.9
4a84A-2wqlA:
36.48
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4IKL_A_SUZA201_1
(TRANSTHYRETIN)
2wql MAJOR ALLERGEN DAU C
1

(Daucus
carota)
4 / 7 LEU A   8
ALA A 118
THR A 100
SER A  83
None
PEG  A 201 ( 4.5A)
P4C  A 200 ( 4.1A)
P4C  A 200 ( 3.8A)
1.08A 4iklA-2wqlA:
undetectable
4iklB-2wqlA:
undetectable
4iklA-2wqlA:
21.29
4iklB-2wqlA:
21.29
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KOX_A_RFPA502_1
(PENTACHLOROPHENOL
4-MONOOXYGENASE)
3ezl ACETOACETYL-COA
REDUCTASE

(Burkholderia
pseudomallei)
5 / 12 VAL A  81
ILE A  84
THR A  11
GLY A  12
GLY A  13
None
None
P4C  A 249 ( 4.7A)
P4C  A 249 (-3.7A)
None
0.92A 5koxA-3ezlA:
4.4
5koxA-3ezlA:
23.30
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6ECX_A_SAMA1301_0
(STIE PROTEIN)
3ezl ACETOACETYL-COA
REDUCTASE

(Burkholderia
pseudomallei)
5 / 12 LEU A  87
GLY A  12
GLY A  35
ILE A  21
ILE A 140
None
P4C  A 249 (-3.7A)
P4C  A 249 (-3.2A)
None
None
1.00A 6ecxA-3ezlA:
4.7
6ecxA-3ezlA:
21.65