SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'OCA'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QEU_B_ACTB141_0
(PUTATIVE
CARBOXYMUCONOLACTONE
DECARBOXYLASE)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
3 / 3 PRO B 401
ASN B 371
ARG B 373
OCA  B   1 ( 4.7A)
None
EDO  B 911 (-4.1A)
0.94A 2qeuB-3l91B:
undetectable
2qeuB-3l91B:
13.56
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QL8_B_BEZB143_0
(PUTATIVE REDOX
PROTEIN)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
4 / 6 TYR B 697
THR B 283
ALA B 281
PRO B 238
None
None
None
OCA  B   1 (-4.0A)
1.41A 2ql8A-3l91B:
undetectable
2ql8B-3l91B:
undetectable
2ql8A-3l91B:
13.77
2ql8B-3l91B:
13.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Y01_A_Y00A601_1
(BETA-1 ADRENERGIC
RECEPTOR)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
5 / 12 SER B 217
PHE B 248
PHE B 240
VAL B 272
ASN B 273
OCA  B   1 (-2.6A)
None
OCA  B   1 (-4.7A)
None
OCA  B   1 ( 3.1A)
1.47A 2y01A-3l91B:
undetectable
2y01A-3l91B:
20.55
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3A51_E_VDYE6178_1
(VITAMIN D
HYDROXYLASE)
2qhs LIPOYLTRANSFERASE
(Thermus
thermophilus)
5 / 12 THR A  80
ASN A 156
ALA A 143
VAL A  99
LEU A 103
OCA  A3913 ( 3.8A)
None
None
None
None
1.22A 3a51E-2qhsA:
undetectable
3a51E-2qhsA:
21.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3BJW_E_SVRE503_1
(PHOSPHOLIPASE A2)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
5 / 11 LEU B 714
ILE B 274
PRO B 238
SER B 217
THR B 695
None
None
OCA  B   1 (-4.0A)
OCA  B   1 (-2.6A)
None
1.36A 3bjwE-3l91B:
2.6
3bjwE-3l91B:
11.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CCF_B_BEZB261_0
(CYCLOPROPANE-FATTY-A
CYL-PHOSPHOLIPID
SYNTHASE)
2qhs LIPOYLTRANSFERASE
(Thermus
thermophilus)
4 / 8 HIS A  82
ILE A  45
PHE A 164
ARG A  75
OCA  A3913 ( 4.7A)
None
None
OCA  A3913 (-3.6A)
1.28A 3ccfB-2qhsA:
undetectable
3ccfB-2qhsA:
21.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3CE6_D_ADND500_1
(ADENOSYLHOMOCYSTEINA
SE)
1h2b ALCOHOL
DEHYDROGENASE

(Aeropyrum
pernix)
5 / 12 HIS A  79
ASP A 168
THR A 172
LEU A 131
MET A 121
ZN  A1362 ( 3.2A)
ZN  A1362 (-2.7A)
NAJ  A1361 (-3.4A)
OCA  A1360 (-4.8A)
None
1.47A 3ce6D-1h2bA:
4.7
3ce6D-1h2bA:
24.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3DH0_A_SAMA220_0
(SAM DEPENDENT
METHYLTRANSFERASE)
2qhs LIPOYLTRANSFERASE
(Thermus
thermophilus)
5 / 12 GLY A 152
GLY A 141
SER A 149
ALA A 154
LEU A  36
OCA  A3913 (-4.3A)
OCA  A3913 (-3.9A)
None
OCA  A3913 ( 4.1A)
None
1.40A 3dh0A-2qhsA:
undetectable
3dh0A-2qhsA:
24.03
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MJR_D_AC2D601_1
(DEOXYCYTIDINE KINASE)
1h2b ALCOHOL
DEHYDROGENASE

(Aeropyrum
pernix)
4 / 8 GLU A  80
PHE A 128
ARG A 354
ASP A  57
None
OCA  A1360 (-4.5A)
NAJ  A1361 (-3.1A)
None
1.10A 3mjrD-1h2bA:
undetectable
3mjrD-1h2bA:
20.49
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FGK_A_0TXA304_0
(RIBOSYLDIHYDRONICOTI
NAMIDE DEHYDROGENASE
[QUINONE])
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
5 / 10 GLY B 694
GLY B 693
ASN B 485
VAL B 286
PHE B 248
None
None
None
OCA  B   1 (-4.0A)
None
1.16A 4fgkA-3l91B:
undetectable
4fgkB-3l91B:
undetectable
4fgkA-3l91B:
19.82
4fgkB-3l91B:
19.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YFB_C_PACC601_0
(PROTEIN RELATED TO
PENICILLIN ACYLASE)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
9 / 12 SER B 217
PRO B 238
PHE B 248
ILE B 274
HIS B 284
VAL B 286
TRP B 378
TRP B 402
VAL B 403
OCA  B   1 (-2.6A)
OCA  B   1 (-4.0A)
None
None
OCA  B   1 (-4.6A)
OCA  B   1 (-4.0A)
EDO  B 915 ( 3.5A)
OCA  B   1 (-4.6A)
OCA  B   1 (-4.8A)
0.62A 4yfbC-3l91B:
49.2
4yfbC-3l91B:
36.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YFB_F_PACF601_0
(PROTEIN RELATED TO
PENICILLIN ACYLASE)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
9 / 12 SER B 217
PRO B 238
PHE B 248
ILE B 274
HIS B 284
VAL B 286
TRP B 378
TRP B 402
VAL B 403
OCA  B   1 (-2.6A)
OCA  B   1 (-4.0A)
None
None
OCA  B   1 (-4.6A)
OCA  B   1 (-4.0A)
EDO  B 915 ( 3.5A)
OCA  B   1 (-4.6A)
OCA  B   1 (-4.8A)
0.62A 4yfbF-3l91B:
49.3
4yfbF-3l91B:
36.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YFB_I_PACI601_0
(PROTEIN RELATED TO
PENICILLIN ACYLASE)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
9 / 12 SER B 217
PRO B 238
PHE B 248
ILE B 274
HIS B 284
VAL B 286
TRP B 378
TRP B 402
VAL B 403
OCA  B   1 (-2.6A)
OCA  B   1 (-4.0A)
None
None
OCA  B   1 (-4.6A)
OCA  B   1 (-4.0A)
EDO  B 915 ( 3.5A)
OCA  B   1 (-4.6A)
OCA  B   1 (-4.8A)
0.57A 4yfbI-3l91B:
48.2
4yfbI-3l91B:
36.82
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
4YFB_L_PACL601_0
(PROTEIN RELATED TO
PENICILLIN ACYLASE)
3l91 ACYL-HOMOSERINE
LACTONE ACYLASE PVDQ
SUBUNIT BETA

(Pseudomonas
aeruginosa)
9 / 12 SER B 217
PRO B 238
PHE B 248
ILE B 274
HIS B 284
VAL B 286
TRP B 378
TRP B 402
VAL B 403
OCA  B   1 (-2.6A)
OCA  B   1 (-4.0A)
None
None
OCA  B   1 (-4.6A)
OCA  B   1 (-4.0A)
EDO  B 915 ( 3.5A)
OCA  B   1 (-4.6A)
OCA  B   1 (-4.8A)
0.61A 4yfbL-3l91B:
48.9
4yfbL-3l91B:
36.82
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6F3N_B_ADNB505_1
(-)
1h2b ALCOHOL
DEHYDROGENASE

(Aeropyrum
pernix)
5 / 12 HIS A  79
ASP A 168
THR A 172
LEU A 131
MET A 121
ZN  A1362 ( 3.2A)
ZN  A1362 (-2.7A)
NAJ  A1361 (-3.4A)
OCA  A1360 (-4.8A)
None
1.48A 6f3nB-1h2bA:
6.4
6f3nB-1h2bA:
23.99