SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'NFS'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3SUD_A_SUEA1201_1
(NS3 PROTEASE, NS4A
PROTEIN)		 1su7 CARBON MONOXIDE
DEHYDROGENASE 2
(Carboxydothermus
hydrogenoformans) 		5 / 12 GLY A 581
GLY A 445
ALA A 559
ALA A 566
SER A 216
 None
NFS  A 639 (-3.6A)
None
None
None
 1.06A 3sudA-1su7A:
undetectable		 3sudA-1su7A:
14.96
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4A97_I_ZPCI1318_2
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)		 1su7 CARBON MONOXIDE
DEHYDROGENASE 2
(Carboxydothermus
hydrogenoformans) 		4 / 6 ILE A 190
PHE A 154
HIS A 261
VAL A 264
 None
None
NFS  A 639 (-3.3A)
None
 1.09A 4a97I-1su7A:
undetectable		 4a97I-1su7A:
16.93
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4R20_A_AERA602_1
(CYTOCHROME P450
FAMILY 17
POLYPEPTIDE 2)		 1su7 CARBON MONOXIDE
DEHYDROGENASE 2
(Carboxydothermus
hydrogenoformans) 		4 / 8 ALA A 564
ILE A 460
VAL A 313
SER A 312
 None
None
None
NFS  A 639 (-3.3A)
 0.80A 4r20A-1su7A:
0.5		 4r20A-1su7A:
20.41
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A5Z_C_WJZC304_0
(BETA-LACTAMASE NDM-1)		 1su7 CARBON MONOXIDE
DEHYDROGENASE 2
(Carboxydothermus
hydrogenoformans) 		4 / 7 HIS A 561
CYH A 333
GLY A  92
HIS A 261
 NFS  A 639 (-4.5A)
NFS  A 639 (-2.2A)
None
NFS  A 639 (-3.3A)
 1.14A 5a5zC-1su7A:
undetectable		 5a5zC-1su7A:
19.84
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HIE_B_P06B801_2
(SERINE/THREONINE-PRO
TEIN KINASE B-RAF)		 1su7 CARBON MONOXIDE
DEHYDROGENASE 2
(Carboxydothermus
hydrogenoformans) 		4 / 7 ILE A 293
GLY A 292
LEU A 100
CYH A 333
 None
None
None
NFS  A 639 (-2.2A)
 0.81A 5hieB-1su7A:
undetectable		 5hieB-1su7A:
17.05