SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'MSS'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OXT_C_SAMC300_1
(NUCLEOSIDE-2'-O-METH
YLTRANSFERASE)		 5wa0 PUTATIVE SULFITE
OXIDASE
(Sinorhizobium
meliloti) 		4 / 4 SER A 240
GLY A 241
HIS A 386
ASP A 137
 MSS  A 401 ( 4.6A)
MSS  A 401 (-3.9A)
None
None
 1.34A 2oxtC-5wa0A:
undetectable		 2oxtC-5wa0A:
23.24
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4CP3_B_RBTB1129_1
(B-CELL LYMPHOMA 6
PROTEIN)		 2ca4 SULFITE:CYTOCHROME C
OXIDOREDUCTASE
SUBUNIT A
(Starkeya
novella) 		4 / 7 ARG A 260
GLY A 210
TYR A 209
SER A 105
 None
MSS  A1374 (-3.8A)
None
MSS  A1374 (-2.7A)
 0.90A 4cp3A-2ca4A:
undetectable
4cp3B-2ca4A:
undetectable		 4cp3A-2ca4A:
16.39
4cp3B-2ca4A:
16.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4EJJ_B_NCTB501_1
(CYTOCHROME P450 2A6)		 2ca4 SULFITE:CYTOCHROME C
OXIDOREDUCTASE
SUBUNIT A
(Starkeya
novella) 		4 / 7 VAL A 204
PHE A  53
GLY A 210
PHE A  52
 None
MSS  A1374 (-3.2A)
MSS  A1374 (-3.8A)
None
 0.98A 4ejjB-2ca4A:
undetectable		 4ejjB-2ca4A:
21.28
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JSD_A_1GNA615_1
(PHIAB6 TAILSPIKE)		 5wa0 PUTATIVE SULFITE
OXIDASE
(Sinorhizobium
meliloti) 		3 / 3 TYR A 267
TYR A  76
GLN A  78
 MSS  A 401 (-4.7A)
MSS  A 401 (-3.3A)
MSS  A 401 (-3.5A)
 0.74A 5jsdA-5wa0A:
undetectable
5jsdB-5wa0A:
undetectable		 5jsdA-5wa0A:
17.77
5jsdB-5wa0A:
17.77
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5JSD_B_1GNB606_1
(PHIAB6 TAILSPIKE)		 5wa0 PUTATIVE SULFITE
OXIDASE
(Sinorhizobium
meliloti) 		3 / 3 TYR A 267
TYR A  76
GLN A  78
 MSS  A 401 (-4.7A)
MSS  A 401 (-3.3A)
MSS  A 401 (-3.5A)
 0.74A 5jsdB-5wa0A:
undetectable
5jsdC-5wa0A:
undetectable		 5jsdB-5wa0A:
17.77
5jsdC-5wa0A:
17.77