SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'MLD'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GTN_G_TRPG81_0
(TRP RNA-BINDING
ATTENUATION PROTEIN)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
4 / 7 THR X 422
SER X 429
GLY X 472
HIS X 473
None
None
None
MLD  X 201 (-3.9A)
0.91A 1gtnF-2f2lX:
undetectable
1gtnG-2f2lX:
undetectable
1gtnF-2f2lX:
20.75
1gtnG-2f2lX:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1GTN_K_TRPK81_0
(TRP RNA-BINDING
ATTENUATION PROTEIN)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
4 / 7 THR X 422
SER X 429
GLY X 472
HIS X 473
None
None
None
MLD  X 201 (-3.9A)
0.98A 1gtnJ-2f2lX:
undetectable
1gtnK-2f2lX:
undetectable
1gtnJ-2f2lX:
20.75
1gtnK-2f2lX:
20.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XRL_A_DXTA1211_1
(TETRACYCLINE
REPRESSOR PROTEIN
CLASS D)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
5 / 12 HIS X 365
SER X 481
PHE X 438
LEU X 470
ILE X 490
MLD  X 201 (-3.9A)
MLD  X 201 (-3.4A)
None
None
None
1.19A 2xrlA-2f2lX:
undetectable
2xrlA-2f2lX:
20.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N58_A_ADNA500_2
(ADENOSYLHOMOCYSTEINA
SE)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX
PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LC
ISOFORM LCA

(Drosophila
melanogaster)
4 / 5 GLN A 404
THR A 405
GLU X 480
HIS X 473
None
MLD  X 201 (-4.1A)
None
MLD  X 201 (-3.9A)
1.42A 3n58A-2f2lA:
undetectable
3n58A-2f2lA:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N58_C_ADNC500_2
(ADENOSYLHOMOCYSTEINA
SE)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX
PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LC
ISOFORM LCA

(Drosophila
melanogaster)
4 / 5 GLN A 404
THR A 405
GLU X 480
HIS X 473
None
MLD  X 201 (-4.1A)
None
MLD  X 201 (-3.9A)
1.42A 3n58C-2f2lA:
undetectable
3n58C-2f2lA:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3N58_D_ADND500_2
(ADENOSYLHOMOCYSTEINA
SE)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX
PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LC
ISOFORM LCA

(Drosophila
melanogaster)
4 / 4 GLN A 404
THR A 405
GLU X 480
HIS X 473
None
MLD  X 201 (-4.1A)
None
MLD  X 201 (-3.9A)
1.46A 3n58D-2f2lA:
undetectable
3n58D-2f2lA:
16.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3OOI_A_SAMA237_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE,
H3 LYSINE-36 AND H4
LYSINE-20 SPECIFIC)
2cb3 PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LE

(Drosophila
melanogaster)
5 / 12 GLY A 265
ASN A 267
ASN A 318
CYH A 315
LEU A 205
None
MLD  A1345 (-3.2A)
MLD  A1345 (-3.2A)
None
MLD  A1345 ( 4.6A)
1.35A 3ooiA-2cb3A:
undetectable
3ooiA-2cb3A:
20.25
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RET_A_SALA201_1
(SALICYLATE
BIOSYNTHESIS PROTEIN
PCHB)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
5 / 10 ALA X 450
VAL X 409
TYR X 399
ILE X 432
ILE X 435
None
None
MLD  X 201 (-4.6A)
None
None
1.24A 3retA-2f2lX:
undetectable
3retB-2f2lX:
undetectable
3retA-2f2lX:
20.11
3retB-2f2lX:
20.11
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4MWZ_A_SAMA301_1
(PHOSPHOETHANOLAMINE
N-METHYLTRANSFERASE,
PUTATIVE)
4qtf L,D-TRANSPEPTIDASE
LDTB

(Mycobacterium
tuberculosis)
3 / 3 SER A  65
ASP A  76
ASP A 232
MLD  A 501 (-4.7A)
None
None
0.87A 4mwzA-4qtfA:
undetectable
4mwzA-4qtfA:
18.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FHZ_A_REAA602_1
(ALDEHYDE
DEHYDROGENASE FAMILY
1 MEMBER A3)
2cb3 PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LE

(Drosophila
melanogaster)
5 / 12 GLY A 253
ARG A 254
ASN A 218
LEU A 243
THR A 209
None
MLD  A1345 (-3.0A)
None
None
None
1.42A 5fhzA-2cb3A:
undetectable
5fhzA-2cb3A:
16.63
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UPD_A_SAMA1301_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
NSD3)
2cb3 PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LE

(Drosophila
melanogaster)
5 / 11 GLY A 265
ASN A 267
ASN A 318
CYH A 315
LEU A 205
None
MLD  A1345 (-3.2A)
MLD  A1345 (-3.2A)
None
MLD  A1345 ( 4.6A)
1.35A 5updA-2cb3A:
undetectable
5updA-2cb3A:
20.80
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_A_ACTA309_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
4 / 4 LEU X 486
GLY X 483
SER X 481
SER X 364
None
None
MLD  X 201 (-3.4A)
MLD  X 201 ( 3.9A)
1.33A 5uunA-2f2lX:
undetectable
5uunA-2f2lX:
21.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5UUN_B_ACTB306_0
(GLUTATHIONE
S-TRANSFERASE-LIKE
PROTEIN)
2f2l PEPTIDOGLYCAN
RECOGNITION
PROTEIN-LC ISOFORM
LCX

(Drosophila
melanogaster)
4 / 4 LEU X 486
GLY X 483
SER X 481
SER X 364
None
None
MLD  X 201 (-3.4A)
MLD  X 201 ( 3.9A)
1.30A 5uunB-2f2lX:
undetectable
5uunB-2f2lX:
21.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6CEN_A_SAMA1301_0
(HISTONE-LYSINE
N-METHYLTRANSFERASE
NSD3)
2cb3 PEPTIDOGLYCAN-RECOGN
ITION PROTEIN-LE

(Drosophila
melanogaster)
5 / 11 GLY A 265
ASN A 267
ASN A 318
CYH A 315
LEU A 205
None
MLD  A1345 (-3.2A)
MLD  A1345 (-3.2A)
None
MLD  A1345 ( 4.6A)
1.38A 6cenA-2cb3A:
undetectable
6cenA-2cb3A:
21.22