SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'MLB'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GVC_B_MMZB501_1
(MONOOXYGENASE)
3alt LECTIN CEL-IV,
C-TYPE

(Cucumaria
echinata)
3 / 3 ASN A 115
TYR A 129
SER A 111
MLB  A 301 (-2.6A)
MLB  A 301 ( 4.2A)
None
0.82A 2gvcB-3altA:
undetectable
2gvcB-3altA:
17.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2GVC_E_MMZE501_1
(MONOOXYGENASE)
3alt LECTIN CEL-IV,
C-TYPE

(Cucumaria
echinata)
3 / 3 ASN A 115
TYR A 129
SER A 111
MLB  A 301 (-2.6A)
MLB  A 301 ( 4.2A)
None
0.88A 2gvcE-3altA:
undetectable
2gvcE-3altA:
17.86
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4TWD_F_377F402_1
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
3alt LECTIN CEL-IV,
C-TYPE

(Cucumaria
echinata)
4 / 8 ALA A 123
ALA A 135
SER A 130
ALA A  80
None
MLB  A 301 ( 3.9A)
None
None
0.80A 4twdF-3altA:
undetectable
4twdG-3altA:
undetectable
4twdH-3altA:
undetectable
4twdI-3altA:
undetectable
4twdJ-3altA:
undetectable
4twdF-3altA:
17.10
4twdG-3altA:
17.10
4twdH-3altA:
17.10
4twdI-3altA:
17.10
4twdJ-3altA:
17.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4TWD_F_377F402_1
(CYS-LOOP
LIGAND-GATED ION
CHANNEL)
3alt LECTIN CEL-IV,
C-TYPE

(Cucumaria
echinata)
4 / 8 ALA A 135
SER A 130
ALA A  80
ALA A 123
MLB  A 301 ( 3.9A)
None
None
None
0.67A 4twdF-3altA:
undetectable
4twdG-3altA:
undetectable
4twdH-3altA:
undetectable
4twdI-3altA:
undetectable
4twdJ-3altA:
undetectable
4twdF-3altA:
17.10
4twdG-3altA:
17.10
4twdH-3altA:
17.10
4twdI-3altA:
17.10
4twdJ-3altA:
17.10