SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'MCA'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1KT7_A_RTLA184_0
(PLASMA
RETINOL-BINDING
PROTEIN)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
5 / 11 LEU A 193
LEU A 191
ALA A  67
VAL A 188
LEU A 160
None
None
None
MCA  A 486 ( 4.1A)
None
0.95A 1kt7A-3nyqA:
undetectable
1kt7A-3nyqA:
17.62
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3G2O_B_SAMB600_0
(PCZA361.24)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
5 / 12 GLY A 209
LEU A 183
SER A 212
GLY A 215
GLU A 219
None
MCA  A 486 ( 4.3A)
None
None
None
1.04A 3g2oB-3nyqA:
undetectable
3g2oB-3nyqA:
25.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3TYE_B_YTZB902_1
(DIHYDROPTEROATE
SYNTHASE)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
3 / 3 PHE A 105
LYS A  38
SER A  41
MCA  A4001 (-4.4A)
None
None
1.36A 3tyeB-1on9A:
undetectable
3tyeB-1on9A:
21.43
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4HFP_B_15UB402_1
(PROTHROMBIN)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
5 / 12 HIS A 187
ALA A 455
ILE A 389
GLU A  86
GLY A 145
MCA  A 486 ( 4.2A)
CL  A 498 ( 3.7A)
None
None
None
1.12A 4hfpB-3nyqA:
undetectable
4hfpB-3nyqA:
18.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4ZE1_A_X2NA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
5 / 12 GLY A 285
MET A 286
PHE A  24
GLY A  62
LEU A 196
MCA  A 486 ( 3.7A)
AMP  A 487 ( 3.8A)
CL  A 497 (-4.7A)
None
None
1.29A 4ze1A-3nyqA:
undetectable
4ze1A-3nyqA:
20.91
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5DBY_A_ACTA617_0
(SERUM ALBUMIN)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
3 / 3 TRP A 171
ARG A 283
LEU A 179
None
MCA  A 486 ( 3.0A)
None
0.85A 5dbyA-3nyqA:
undetectable
5dbyA-3nyqA:
22.42
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E26_B_PAUB601_0
(PANTOTHENATE KINASE
2, MITOCHONDRIAL)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
4 / 7 GLU A 147
GLY A  85
SER A 111
GLY A 109
None
None
MCA  A4001 (-3.7A)
MCA  A4001 (-3.0A)
0.80A 5e26A-1on9A:
undetectable
5e26B-1on9A:
undetectable
5e26A-1on9A:
22.46
5e26B-1on9A:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5E26_C_PAUC602_0
(PANTOTHENATE KINASE
2, MITOCHONDRIAL)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
4 / 7 GLU A 147
GLY A  85
SER A 111
GLY A 109
None
None
MCA  A4001 (-3.7A)
MCA  A4001 (-3.0A)
0.81A 5e26C-1on9A:
undetectable
5e26D-1on9A:
undetectable
5e26C-1on9A:
22.46
5e26D-1on9A:
22.46
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IMS_A_ACTA708_0
(ACETOLACTATE
SYNTHASE CATALYTIC
SUBUNIT,
MITOCHONDRIAL)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
3 / 3 GLY A 142
GLY A 141
GLN A 103
MCA  A4001 ( 4.1A)
MCA  A4001 (-3.4A)
None
0.47A 5imsA-1on9A:
2.1
5imsA-1on9A:
22.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5KPR_A_PAUA404_0
(PANTOTHENATE KINASE
3)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
4 / 5 GLU A 147
GLY A  85
SER A 111
GLY A 109
None
None
MCA  A4001 (-3.7A)
MCA  A4001 (-3.0A)
0.89A 5kprA-1on9A:
undetectable
5kprA-1on9A:
23.53
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5XXI_A_LSNA501_2
(CYTOCHROME P450 2C9)
3nyq MALONYL-COA LIGASE
(Streptomyces
coelicolor)
4 / 4 PHE A 228
LEU A 160
LEU A 167
VAL A 188
None
None
None
MCA  A 486 ( 4.1A)
0.96A 5xxiA-3nyqA:
undetectable
5xxiA-3nyqA:
19.75
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DGX_A_017A101_2
(PROTEASE)
1on9 METHYLMALONYL-COA
CARBOXYLTRANSFERASE
12S SUBUNIT

(Propionibacteriu
m
freudenreichii)
3 / 3 GLY A 141
ASP A 139
ILE A 175
MCA  A4001 (-3.4A)
None
None
0.57A 6dgxB-1on9A:
undetectable
6dgxB-1on9A:
8.80