SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'LYC'

List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)

Filter list by:

	DrReposER ID / Desc.	Hit PDBID	Hit Macromolecule	Res. Matches	Interface	HETATM	RMSD	Dali Z-score	Seq. Identity (%)
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4OAD_A_CLMA206_0 (GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794)	1lgh	LIGHT HARVESTING COMPLEX II (Phaeospirillum molischianum)	4 / 4	ALA A 32 ALA A 35 ALA A 36 ALA A 39	LYC A 97 ( 3.6A) HTO A 62 (-3.9A) LYC A 97 ( 3.0A) DET A 75 ( 3.7A)	0.11A	4oadA-1lghA: undetectable	4oadA-1lghA: 16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4OAE_A_CLMA208_0 (GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794)	1lgh	LIGHT HARVESTING COMPLEX II (Phaeospirillum molischianum)	4 / 4	ALA A 32 ALA A 35 ALA A 36 ALA A 39	LYC A 97 ( 3.6A) HTO A 62 (-3.9A) LYC A 97 ( 3.0A) DET A 75 ( 3.7A)	0.09A	4oaeA-1lghA: undetectable	4oaeA-1lghA: 16.88
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.	4XTA_A_DIFA501_1 (PEROXISOME PROLIFERATOR-ACTIVAT ED RECEPTOR GAMMA)	1lgh	LIGHT HARVESTING COMPLEX II (Phaeospirillum molischianum)	4 / 9	ALA B 15 LEU B 8 LEU A 11 ILE A 9	LYC A 97 ( 2.7A) None None BCL A 58 (-4.0A)	0.85A	4xtaA-1lghB: undetectable	4xtaA-1lghB: 11.81

[["DrReposER ID","Desc.","Hit PDB","Hit molecule","Hit organism","Res. no.","Interface","HETATM","RMSD","Z-score","Seq ID"],["4OAD_A_CLMA206_0","GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794","1lgh","LIGHT HARVESTING COMPLEX II","Phaeospirillum molischianum",4,"ALA A  32;ALA A  35;ALA A  36;ALA A  39","LYC A  97 ( 3.6A);HTO A  62 (-3.9A);LYC A  97 ( 3.0A);DET A  75 ( 3.7A)","0.11A","4oadA-1lghA:undetectable",null],["4OAE_A_CLMA208_0","GNAT SUPERFAMILY ACETYLTRANSFERASE PA4794","1lgh","LIGHT HARVESTING COMPLEX II","Phaeospirillum molischianum",4,"ALA A  32;ALA A  35;ALA A  36;ALA A  39","LYC A  97 ( 3.6A);HTO A  62 (-3.9A);LYC A  97 ( 3.0A);DET A  75 ( 3.7A)","0.09A","4oaeA-1lghA:undetectable","4oadA-1lghA:16.88"],["4XTA_A_DIFA501_1","PEROXISOME PROLIFERATOR-ACTIVATED RECEPTOR GAMMA","1lgh","LIGHT HARVESTING COMPLEX II","Phaeospirillum molischianum",4,"ALA B  15;LEU B   8;LEU A  11;ILE A   9","LYC A  97 ( 2.7A);None;None;BCL A  58 (-4.0A)","0.85A","4xtaA-1lghB:undetectable","4oaeA-1lghA:16.88"]]