SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'LXV'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1STF_E_CCSE25_0
(PAPAIN
STEFIN B (CYSTATIN
B))
3pdf DIPEPTIDYL PEPTIDASE
1

(Homo
sapiens)
6 / 10 GLN A 228
GLY A 232
SER A 233
PHE A 237
HIS A 381
ALA A 382
LXV  A 442 (-3.4A)
LXV  A 442 (-3.5A)
None
None
None
LXV  A 442 ( 3.8A)
0.31A 1stfE-3pdfA:
29.4
1stfI-3pdfA:
undetectable
1stfE-3pdfA:
19.00
1stfI-3pdfA:
11.81
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3AI8_A_HNQA255_1
(CATHEPSIN B)
3pdf DIPEPTIDYL PEPTIDASE
1

(Homo
sapiens)
4 / 7 GLN A 228
GLY A 232
HIS A 381
TRP A 405
LXV  A 442 (-3.4A)
LXV  A 442 (-3.5A)
None
None
0.51A 3ai8A-3pdfA:
29.6
3ai8A-3pdfA:
24.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IH0_A_ACTA402_0
(MACROLIDE
2'-PHOSPHOTRANSFERAS
E II)
3pdf DIPEPTIDYL PEPTIDASE
1

(Homo
sapiens)
4 / 6 PHE A 278
PRO A 279
THR A 379
ILE A 429
LXV  A 442 ( 3.8A)
CL  A 443 ( 4.0A)
LXV  A 442 (-4.2A)
None
1.27A 5ih0A-3pdfA:
1.7
5ih0A-3pdfA:
20.77