SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'KKK'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RV5_C_DXCC92_0
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
5li8 PUTATIVE CYTOCHROME
P450 126

(Mycobacterium
tuberculosis)
4 / 4 VAL A  94
PHE A 246
PHE A 251
VAL A 176
None
KKK  A 502 (-4.7A)
None
None
1.48A 3rv5C-5li8A:
1.2
3rv5D-5li8A:
0.9
3rv5C-5li8A:
11.92
3rv5D-5li8A:
11.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3RV5_C_DXCC92_0
(TROPONIN C, SLOW
SKELETAL AND CARDIAC
MUSCLES)
5li8 PUTATIVE CYTOCHROME
P450 126

(Mycobacterium
tuberculosis)
4 / 4 VAL A 225
PHE A 246
PHE A 251
VAL A 164
None
KKK  A 502 (-4.7A)
None
None
1.36A 3rv5C-5li8A:
1.2
3rv5D-5li8A:
0.9
3rv5C-5li8A:
11.92
3rv5D-5li8A:
11.92
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5HS1_A_VORA602_1
(LANOSTEROL 14-ALPHA
DEMETHYLASE)
5li8 PUTATIVE CYTOCHROME
P450 126

(Mycobacterium
tuberculosis)
4 / 8 ILE A 119
GLY A 365
LEU A 250
LEU A 162
None
HEM  A 501 (-3.3A)
KKK  A 502 ( 4.4A)
None
0.76A 5hs1A-5li8A:
27.9
5hs1A-5li8A:
22.45
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5N5D_A_SAMA306_0
(METHYLTRANSFERASE)
5li8 PUTATIVE CYTOCHROME
P450 126

(Mycobacterium
tuberculosis)
5 / 12 ALA A 226
VAL A 225
GLU A 208
ARG A 201
PHE A 246
None
None
None
None
KKK  A 502 (-4.7A)
1.17A 5n5dA-5li8A:
undetectable
5n5dA-5li8A:
22.44