SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'JW5'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1JZS_A_MRCA1301_1
(ISOLEUCYL-TRNA
SYNTHETASE)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
5 / 11 GLY A 418
SER A 373
GLY A 450
ASP A 259
ILE A 277
JW5  A 482 ( 4.9A)
None
JW5  A 482 (-3.4A)
JW5  A 482 (-2.9A)
None
1.24A 1jzsA-2qcmA:
undetectable
1jzsA-2qcmA:
16.20
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1RG7_A_MTXA161_2
(DIHYDROFOLATE
REDUCTASE)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
3 / 3 ILE A 446
ILE A 448
THR A 252
None
JW5  A 482 ( 4.6A)
None
0.61A 1rg7A-2qcmA:
undetectable
1rg7A-2qcmA:
20.31
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DU8_A_BEZA352_0
(D-AMINO-ACID OXIDASE)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
4 / 6 LEU A 254
TYR A 466
ILE A 453
GLY A 418
None
None
None
JW5  A 482 ( 4.9A)
0.81A 2du8A-2qcmA:
undetectable
2du8A-2qcmA:
24.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2DU8_B_BEZB1352_0
(D-AMINO-ACID OXIDASE)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
4 / 6 LEU A 254
TYR A 466
ILE A 453
GLY A 418
None
None
None
JW5  A 482 ( 4.9A)
0.84A 2du8B-2qcmA:
undetectable
2du8B-2qcmA:
24.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_A_SAMA401_1
(METHYLTRANSFERASE
NSUN4)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
3 / 3 ASP A 285
ARG A 313
ASP A 259
None
None
JW5  A 482 (-2.9A)
0.86A 4fp9A-2qcmA:
undetectable
4fp9A-2qcmA:
19.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_C_SAMC401_1
(METHYLTRANSFERASE
NSUN4)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
3 / 3 ASP A 285
ARG A 313
ASP A 259
None
None
JW5  A 482 (-2.9A)
0.86A 4fp9C-2qcmA:
undetectable
4fp9C-2qcmA:
19.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4FP9_F_SAMF401_1
(METHYLTRANSFERASE
NSUN4)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
3 / 3 ASP A 285
ARG A 313
ASP A 259
None
None
JW5  A 482 (-2.9A)
0.88A 4fp9F-2qcmA:
undetectable
4fp9F-2qcmA:
19.67
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6GNG_B_QPSB601_3
(-)
2qcm URIDINE
5'-MONOPHOSPHATE
SYNTHASE (UMP
SYNTHASE)

(Homo
sapiens)
3 / 3 ASP A 289
ASP A 285
ASN A 341
None
None
JW5  A 482 (-4.3A)
0.83A 6gngB-2qcmA:
undetectable
6gngB-2qcmA:
19.64