SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'HTG'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1HPV_B_478B200_2
(HIV-1 PROTEASE)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 9 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 1.01A 1hpvB-4bemJ:
undetectable		 1hpvB-4bemJ:
22.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2O4S_A_AB1A400_1
(PROTEASE)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 12 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 0.96A 2o4sA-4bemJ:
undetectable		 2o4sA-4bemJ:
21.08
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2OXT_C_SAMC300_0
(NUCLEOSIDE-2'-O-METH
YLTRANSFERASE)		 4bem F1FO ATPASE C2
SUBUNIT
F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii;
Acetobacterium
woodii) 		5 / 12 GLY A  36
GLY A  34
GLY A  30
ILE A  50
VAL J 153
 None
None
None
None
HTG  J1184 ( 4.5A)
 0.98A 2oxtC-4bemA:
undetectable		 2oxtC-4bemA:
16.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2Q5K_A_AB1A201_1
(PROTEASE)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 9 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 0.93A 2q5kA-4bemJ:
undetectable		 2q5kA-4bemJ:
19.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2QHC_B_AB1B9001_1
(PROTEASE RETROPEPSIN)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 11 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 1.01A 2qhcA-4bemJ:
undetectable		 2qhcA-4bemJ:
22.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2YVL_C_SAMC604_0
(HYPOTHETICAL PROTEIN)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 12 GLY J 116
ALA J 112
ALA J  38
VAL J  37
PHE J  84
 None
None
None
None
HTG  J1187 ( 4.7A)
 1.27A 2yvlC-4bemJ:
undetectable		 2yvlC-4bemJ:
22.39
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4DQC_A_017A101_1
(ASPARTYL PROTEASE)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 10 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 1.10A 4dqcA-4bemJ:
undetectable		 4dqcA-4bemJ:
20.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5SXQ_B_NIZB808_1
(CATALASE-PEROXIDASE)		 4bem F1FO ATPASE C1
SUBUNIT
F1FO ATPASE C2
SUBUNIT
(Acetobacterium
woodii) 		4 / 8 VAL J  77
GLY A  26
GLN J 162
THR J 164
 HTG  J1186 (-4.7A)
None
HTG  J1186 (-4.4A)
NA  A 201 ( 4.2A)
 1.02A 5sxqB-4bemJ:
undetectable		 5sxqB-4bemJ:
15.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5SYJ_A_NIZA809_1
(CATALASE-PEROXIDASE)		 4bem F1FO ATPASE C1
SUBUNIT
F1FO ATPASE C2
SUBUNIT
(Acetobacterium
woodii) 		4 / 8 VAL J  77
GLY A  26
GLN J 162
THR J 164
 HTG  J1186 (-4.7A)
None
HTG  J1186 (-4.4A)
NA  A 201 ( 4.2A)
 1.02A 5syjA-4bemJ:
undetectable		 5syjA-4bemJ:
15.66
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5WWS_A_SAMA501_0
(PUTATIVE
METHYLTRANSFERASE
NSUN6)		 5zzn -
(-) 		5 / 12 ALA U  53
PRO U  54
ASP U  60
LEU U  67
LEU U  75
 DMS  U 202 ( 3.5A)
HTG  U 203 (-3.9A)
HTG  U 203 (-4.3A)
None
None
 1.04A 5wwsA-5zznU:
undetectable		 5wwsA-5zznU:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
6DJ2_B_AB1B201_0
(HIV-1 PROTEASE)		 4bem F1FO ATPASE C1
SUBUNIT
(Acetobacterium
woodii) 		5 / 10 ALA J 172
GLY J 165
ILE J 166
VAL J  87
ILE J  88
 None
None
None
HTG  J1187 (-4.5A)
None
 0.93A 6dj2A-4bemJ:
undetectable		 6dj2A-4bemJ:
20.25