SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'HPN'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MZ9_D_VDYD1001_5
(CARTILAGE OLIGOMERIC
MATRIX PROTEIN)
1nww LIMONENE-1,2-EPOXIDE
HYDROLASE

(Rhodococcus
erythropolis)
3 / 3 THR A  70
LEU A  74
VAL A  77
None
HPN  A 900 ( 4.8A)
None
0.47A 1mz9E-1nwwA:
undetectable
1mz9E-1nwwA:
16.10
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5FUK_A_SNPA1236_1
(MROUPO)
1nww LIMONENE-1,2-EPOXIDE
HYDROLASE

(Rhodococcus
erythropolis)
4 / 7 ILE A   5
ILE A  80
ILE A 116
LEU A  35
None
HPN  A 900 ( 4.4A)
None
None
0.81A 5fukA-1nwwA:
undetectable
5fukB-1nwwA:
undetectable
5fukA-1nwwA:
21.16
5fukB-1nwwA:
21.16
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEF_A_NBVA1005_1
(NEUTRAL
ALPHA-GLUCOSIDASE AB)
1nww LIMONENE-1,2-EPOXIDE
HYDROLASE

(Rhodococcus
erythropolis)
5 / 12 TRP A 130
ASP A 132
ILE A 116
ASP A 101
PHE A  75
None
HPN  A 900 (-4.3A)
None
HPN  A 900 (-3.4A)
None
1.28A 5iefA-1nwwA:
undetectable
5iefA-1nwwA:
11.08