SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'GYM'


List of Similar Pattern of Amino Acids

Hit pattern: 3D amino acid arrangements similar to known drug binding site
Query pattern: Residues from known binding site for annotated drug that match the hit pattern

(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID		 Hit
Macromolecule		 Res.
Matches		 Interface HETATM RMSD Dali
Z-score		 Seq.
Identity (%)		 View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3MJR_D_AC2D601_1
(DEOXYCYTIDINE KINASE)		 2wex APOLIPOPROTEIN M
(Homo
sapiens) 		4 / 8 GLU A 136
PHE A  71
ARG A 143
PHE A  63
 GYM  A1186 (-3.1A)
GYM  A1186 (-3.8A)
None
GYM  A1186 (-4.6A)
 1.07A 3mjrD-2wexA:
undetectable		 3mjrD-2wexA:
21.64
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5IEN_A_VDYA201_1
(CDL2.2)		 2wex APOLIPOPROTEIN M
(Homo
sapiens) 		5 / 12 LEU A  60
PHE A  63
MET A  73
ILE A 132
LEU A 123
 None
GYM  A1186 (-4.6A)
GYM  A1186 ( 4.9A)
GYM  A1186 ( 4.6A)
None
 1.26A 5ienA-2wexA:
undetectable		 5ienA-2wexA:
23.63