SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'G3A'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XZX_X_T3X500_2
(THYROID HORMONE
RECEPTOR BETA-1)
5c8s GUANINE-N7
METHYLTRANSFERASE

(Severe
acute
respiratory
syndrome-related
coronavirus)
3 / 3 PHE B 426
ARG B  84
ASN B 410
G3A  B 606 (-3.4A)
None
None
0.91A 1xzxX-5c8sB:
undetectable
1xzxX-5c8sB:
21.02
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U9F_C_CLMC221_0
(CHLORAMPHENICOL
ACETYLTRANSFERASE)
5c8s GUANINE-N7
METHYLTRANSFERASE

(Severe
acute
respiratory
syndrome-related
coronavirus)
5 / 11 PHE B 506
CYH B 399
SER B 418
VAL B 398
PHE B 436
G3A  B 606 (-3.8A)
None
None
None
None
1.47A 3u9fA-5c8sB:
undetectable
3u9fC-5c8sB:
undetectable
3u9fA-5c8sB:
18.38
3u9fC-5c8sB:
18.38
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5C8T_B_SAMB605_0
(GUANINE-N7
METHYLTRANSFERASE)
5c8s GUANINE-N7
METHYLTRANSFERASE

(Severe
acute
respiratory
syndrome-related
coronavirus)
11 / 11 TRP B 292
GLY B 333
PRO B 335
ASP B 352
ALA B 353
PHE B 367
TYR B 368
TRP B 385
ASN B 386
CYH B 387
VAL B 389
None
SAH  B 605 (-3.3A)
SAH  B 605 (-3.8A)
SAH  B 605 (-2.3A)
SAH  B 605 (-3.5A)
SAH  B 605 (-3.5A)
None
G3A  B 606 ( 4.1A)
G3A  B 606 ( 3.8A)
SAH  B 605 ( 3.8A)
SAH  B 605 (-4.7A)
0.41A 5c8tB-5c8sB:
49.2
5c8tB-5c8sB:
100.00
Available target for annotated drug, i.e. matched protein structure has more than 30% sequence identity to known drug target.
5C8T_D_SAMD605_0
(GUANINE-N7
METHYLTRANSFERASE)
5c8s GUANINE-N7
METHYLTRANSFERASE

(Severe
acute
respiratory
syndrome-related
coronavirus)
10 / 10 TRP B 292
GLY B 333
ASN B 334
PRO B 335
ASP B 352
ALA B 353
GLN B 354
PHE B 367
TRP B 385
CYH B 387
None
SAH  B 605 (-3.3A)
SAH  B 605 (-4.1A)
SAH  B 605 (-3.8A)
SAH  B 605 (-2.3A)
SAH  B 605 (-3.5A)
None
SAH  B 605 (-3.5A)
G3A  B 606 ( 4.1A)
SAH  B 605 ( 3.8A)
0.71A 5c8tD-5c8sB:
45.9
5c8tD-5c8sB:
100.00