SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'F9F'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1NH8_A_HISA289_0
(ATP
PHOSPHORIBOSYLTRANSF
ERASE)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 ASP A 130
LEU A 127
ALA A  59
LEU A  58
None
F9F  A   1 (-4.7A)
F9F  A   1 (-3.5A)
None
1.11A 1nh8A-3pr2A:
undetectable
1nh8A-3pr2A:
22.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1S14_A_NOVA1300_1
(TOPOISOMERASE IV
SUBUNIT B)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN
TRYPTOPHAN SYNTHASE
BETA CHAIN

(Salmonella
enterica)
5 / 12 SER A 235
PRO A  57
ASP A  56
ARG B 175
THR A 183
F9F  A   1 (-2.5A)
None
None
None
F9F  A   1 (-3.9A)
1.39A 1s14A-3pr2A:
undetectable
1s14A-3pr2A:
20.74
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1XVA_B_ACTB294_0
(GLYCINE
N-METHYLTRANSFERASE)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 6 ALA A 129
TYR A 175
ILE A 153
LEU A 100
F9F  A   1 (-3.5A)
F9F  A   1 (-4.0A)
F9F  A   1 (-4.3A)
F9F  A   1 (-3.6A)
0.91A 1xvaA-3pr2A:
undetectable
1xvaB-3pr2A:
undetectable
1xvaA-3pr2A:
22.33
1xvaB-3pr2A:
22.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
2XKW_B_P1BB1475_2
(PEROXISOME
PROLIFERATOR-ACTIVAT
ED RECEPTOR GAMMA)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 6 ARG A 188
ILE A 214
ILE A 153
LEU A 100
None
None
F9F  A   1 (-4.3A)
F9F  A   1 (-3.6A)
0.98A 2xkwB-3pr2A:
undetectable
2xkwB-3pr2A:
20.27
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3FPJ_A_SAMA301_1
(PUTATIVE
UNCHARACTERIZED
PROTEIN)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 6 TYR A 175
GLY A 213
GLU A 186
GLU A 242
F9F  A   1 (-4.0A)
F9F  A   1 (-3.6A)
None
None
0.93A 3fpjA-3pr2A:
undetectable
3fpjA-3pr2A:
22.19
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3KPC_A_SAMA1000_0
(UNCHARACTERIZED
PROTEIN MJ0100)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
5 / 11 ILE A  64
THR A 183
THR A  63
VAL A 238
ILE A 237
None
F9F  A   1 (-3.9A)
None
None
None
1.26A 3kpcA-3pr2A:
undetectable
3kpcA-3pr2A:
18.44
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3U5J_A_08HA1_1
(BROMODOMAIN-CONTAINI
NG PROTEIN 4)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN
TRYPTOPHAN SYNTHASE
BETA CHAIN

(Salmonella
enterica)
4 / 7 PRO B  18
LEU A 162
ASN A 157
ILE B  20
F9F  A   1 (-4.1A)
None
None
None
0.96A 3u5jA-3pr2B:
undetectable
3u5jA-3pr2B:
14.99
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_A_W9TA1001_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.22A 3w9tA-3pr2A:
undetectable
3w9tA-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_B_W9TB503_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.21A 3w9tB-3pr2A:
undetectable
3w9tB-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_C_W9TC1001_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.21A 3w9tC-3pr2A:
undetectable
3w9tC-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_D_W9TD502_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.21A 3w9tD-3pr2A:
undetectable
3w9tD-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_E_W9TE504_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.22A 3w9tE-3pr2A:
undetectable
3w9tE-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_F_W9TF504_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.22A 3w9tF-3pr2A:
undetectable
3w9tF-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3W9T_G_W9TG504_1
(HEMOLYTIC LECTIN
CEL-III)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 5 VAL A  52
GLY A  51
TYR A 102
ASP A  60
None
None
None
F9F  A   1 ( 4.5A)
1.21A 3w9tG-3pr2A:
undetectable
3w9tG-3pr2A:
21.73
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4WH5_A_3QBA204_1
(LINCOSAMIDE
RESISTANCE PROTEIN)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
5 / 12 ASP A  60
GLY A  61
PHE A  22
ILE A  64
ALA A  67
F9F  A   1 ( 4.5A)
None
F9F  A   1 (-3.7A)
None
None
1.32A 4wh5A-3pr2A:
undetectable
4wh5A-3pr2A:
18.89
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
5A06_B_SORB1341_0
(ALDOSE-ALDOSE
OXIDOREDUCTASE)
3pr2 TRYPTOPHAN SYNTHASE
ALPHA CHAIN

(Salmonella
enterica)
4 / 7 ARG A 179
PHE A  22
ASP A  60
ILE A  64
F9F  A   1 ( 4.9A)
F9F  A   1 (-3.7A)
F9F  A   1 ( 4.5A)
None
1.36A 5a06B-3pr2A:
undetectable
5a06B-3pr2A:
22.97