SIMILAR PATTERN OF AMINO ACIDS MAPPED TO 'F4S'


List of Similar Pattern of Amino Acids


Hit pattern: 3D amino acid arrangements similar to known drug binding site

Query pattern: Residues from known binding site for annotated drug that match the hit pattern


(Click on the DrReposER ID to view details on interfaces and similar patterns of amino acids)
(Click on the view link on the last column to view superposed patterns of amino acids)
Filter list by:
DrReposER ID / Desc. Hit
PDBID
Hit
Macromolecule
Res.
Matches
Interface HETATM RMSD Dali
Z-score
Seq.
Identity (%)
View Dock
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MOG_A_RBFA200_1
(DODECIN)
3ayx MEMBRANE-BOUND
HYDROGENASE SMALL
SUBUNIT

(Hydrogenovibrio
marinus)
3 / 3 PHE B  30
TRP B  17
GLU B  82
None
None
F4S  B 301 ( 4.8A)
1.16A 1mogA-3ayxB:
undetectable
1mogA-3ayxB:
14.34
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MOG_A_RBFA200_1
(DODECIN)
4c3o HYDROGENASE-1 SMALL
SUBUNIT

(Salmonella
enterica)
3 / 3 PHE B  24
TRP B  11
GLU B  76
None
None
F4S  B1003 ( 4.8A)
1.01A 1mogA-4c3oB:
undetectable
1mogA-4c3oB:
13.65
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
1MOG_A_RBFA200_1
(DODECIN)
5mdj HOXK
UPTAKE HYDROGENASE
SMALL SUBUNIT

(Cupriavidus
necator)
3 / 3 PHE S  24
TRP S  11
GLU S  76
None
None
F4S  S1003 (-4.1A)
1.19A 1mogA-5mdjS:
undetectable
1mogA-5mdjS:
25.00
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3GWX_B_EPAB3_1
(PROTEIN (PEROXISOME
PROLIFERATOR
ACTIVATED RECEPTOR
(PPAR-DELTA)))
4c3o HYDROGENASE-1 LARGE
SUBUNIT
HYDROGENASE-1 SMALL
SUBUNIT

(Salmonella
enterica)
5 / 12 THR B  47
THR B  18
GLU B  76
ILE B  25
LEU A 580
None
None
F4S  B1003 ( 4.8A)
None
None
1.45A 3gwxB-4c3oB:
undetectable
3gwxB-4c3oB:
21.59
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3QL6_A_NIMA614_1
(LACTOPEROXIDASE)
3ayx MEMBRANE-BOUND
HYDROGENASE LARGE
SUBUNIT
MEMBRANE-BOUND
HYDROGENASE SMALL
SUBUNIT

(Hydrogenovibrio
marinus)
4 / 7 HIS A 117
GLU A  73
GLU B  28
PRO B 159
None
None
None
F4S  B 301 ( 4.8A)
1.20A 3ql6A-3ayxA:
undetectable
3ql6A-3ayxA:
23.51
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R9T_C_BEZC264_0
(ECHA1_1)
3ayx MEMBRANE-BOUND
HYDROGENASE SMALL
SUBUNIT

(Hydrogenovibrio
marinus)
4 / 5 ALA B 122
GLU B  82
ALA B  80
MET B 165
None
F4S  B 301 ( 4.8A)
None
None
1.45A 3r9tC-3ayxB:
undetectable
3r9tC-3ayxB:
21.33
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
3R9T_C_BEZC264_0
(ECHA1_1)
5mdj UPTAKE HYDROGENASE
SMALL SUBUNIT
HOXK

(Cupriavidus
necator)
4 / 5 ALA S 116
GLU S  76
ALA S  74
MET S 156
None
F4S  S1003 (-4.1A)
None
None
1.48A 3r9tC-5mdjS:
undetectable
3r9tC-5mdjS:
undetectable
Potential target for repurposing, i.e. matched protein structure has less than 30% sequence identity to known drug target, and may potentially interact with the same drug molecule based on local structural similarity of binding site.
4XI3_C_29SC601_2
(ESTROGEN RECEPTOR)
3ayx MEMBRANE-BOUND
HYDROGENASE LARGE
SUBUNIT
MEMBRANE-BOUND
HYDROGENASE SMALL
SUBUNIT

(Hydrogenovibrio
marinus)
4 / 6 LEU B  21
GLU A  28
ILE A  59
PRO B 159
None
O  A 608 ( 3.1A)
None
F4S  B 301 ( 4.8A)
0.99A 4xi3C-3ayxB:
undetectable
4xi3C-3ayxB:
18.04